cluster # 2501

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Oryza sativa
cluster # 2501 cluster # 2501 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2501#0 length = 697 sequences # 2

consensusID : consensus_2501#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 697
fasta sequence

                              [AAACTGGAATTTCATTGTTTCCAAATGCCCTAAAACATTTGGATGAGCAAAAATCCCTCCTTCCAAAAAAAAATAATTACCGNGCTCCCCCCCCCCCAACACAACAAAAAAAAACAAAATTCTGTTCATCGTGGACAACGGCTCTAAATTCCAATGTCCCATTTTCTACGCAATTGTACACAGAAGTAAAAAATATACACAACACAAATCTACTTTGGATGAATGCATTTACGGAGGCTCAGCTTCAATCATATAACCGCATGAAAACTCCAAAGTTTTGATCCATCGTCTCATACAGAAGCTGAAGATGGCCTGAAGGACATGCAGATCGGTGGATCAACTCCCAGGATGGACAGAACAGCAGAAGGAATGCTCCAGACCCCATCTCCACAGATCAAGCCGGACGCAACTGCCACCGCATAATCATCAGCCTCTCTCCGGTCTATCTTCTGCCAGGCGAACAGGATCAATGTCCCTATGAACATGTCCACGCCGAAATACGCGCCAATGGAGAATGGCACGGCCATCGCCATCGGAATGGGGATGAACCTGGAGACATGGTTTGGAACAACATCCTTCATGAGGTTGATGATCAGTGCTGCCAAGAAGAACACACAGCAGATCTCAAGGCAGTGCCTTGGCAGCGCCGCAAAGCCTTCGATGCCGATGATGGCCATCTCCCTGAAGATGATGGCAA]

[+] EMBL CB669125             [AAACTGGAATTTCATTGTTTCCAAATGCCCTAAAACATTTGGATGAGCAAAAATCCCTCCTTCCAAAAAAAAATAATTACCGNGCTCCCCCCCCCCCAACACAACAAAAAAAAACAAAATTCTGTTCATCGTGGACAACGGCTCTAAATTCCAATGTCCCATTTTCTACGCAATTGTACACAGAAGTAAAAAATATACACAACACAAATCTACTTTGGATGAATGCATTTACGGAGGCTCAGCTTCAATCATATAACCGCATGAAAACTCCAAAGTTTTGATCCATCGTCTCATACAGAAGCTGAAGATGGCCTGAAGGACATGCAGATCGGTGGATCAACTCCCAGGATGGACAGAACAGCAGAAGGAATGCTCCAGACCCCATCTCCACAGATCAAGCCGGACGCAACTGCCACCGCATAATCATCAGCCTCTCTCCGGTCTATCTTCTGCCAGGCGAACAGGATCAATGTCCCTATGAACATGTCCACGCCGAAATACGCGCCAATGGAGAATGGCACGGCCATCGCCATCGGAATGGGGATGAACCTGGAGACATGGTTTGGAACAACATCCTTCATGAGGTTGATGATCAGTGCTGCCAAGAAGAACACACAGCAGATCTCAAGGCAGTGCCTTGGCAGCGCCGCAAAGCCTTCGATGCCGATGATGGCCATCTCCCTGAAGATGATGGCAA]
[-] EMBL AK108750             [                                                                                                                                     GACAACGGCTCT  ATTCCAATGTCCCATTTTCTACACAATTGTACACAGAAGTAGAAAATATACACAACACAAATCTACTTTGTATGAATGCATTTACAGAGGCTCAGCTTCAATCATATAACCGCATGAAAACTCCAAAGTTTTGATCCATCGTCTCATACAGAAGCTGAAGATGGCCTGAAGGACATGCAGATCGGTGGATCAACTCCCAGGATGGACAGAACAGCAGAAGGAATGCTCCAGGCCCCATCTCCACAGATCAAGCCGGACGCAA                                                                                                                                                                                                                                                                                                ]




>consensus_2501#0
AAACTGGAATTTCATTGTTTCCAAATGCCCTAAAACATTTGGATGAGCAAAAATCCCTCC
TTCCAAAAAAAAATAATTACCGNGCTCCCCCCCCCCCAACACAACAAAAAAAAACAAAAT
TCTGTTCATCGTGGACAACGGCTCTAAATTCCAATGTCCCATTTTCTACGCAATTGTACA
CAGAAGTAAAAAATATACACAACACAAATCTACTTTGGATGAATGCATTTACGGAGGCTC
AGCTTCAATCATATAACCGCATGAAAACTCCAAAGTTTTGATCCATCGTCTCATACAGAA
GCTGAAGATGGCCTGAAGGACATGCAGATCGGTGGATCAACTCCCAGGATGGACAGAACA
GCAGAAGGAATGCTCCAGACCCCATCTCCACAGATCAAGCCGGACGCAACTGCCACCGCA
TAATCATCAGCCTCTCTCCGGTCTATCTTCTGCCAGGCGAACAGGATCAATGTCCCTATG
AACATGTCCACGCCGAAATACGCGCCAATGGAGAATGGCACGGCCATCGCCATCGGAATG
GGGATGAACCTGGAGACATGGTTTGGAACAACATCCTTCATGAGGTTGATGATCAGTGCT
GCCAAGAAGAACACACAGCAGATCTCAAGGCAGTGCCTTGGCAGCGCCGCAAAGCCTTCG
ATGCCGATGATGGCCATCTCCCTGAAGATGATGGCAA

clustalw multiple alignements is not computed in this case