Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2513 cluster # 2513       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2513#0 length = 1518 sequences # 2  

consensusID : consensus_2513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1518
fasta sequence
                              [TCCGATCTCTCGCTTTCCTTTCCCCACCACAGAGCCGCGCCTCCGACGCGATCACCCTAAACTTCTCGATCTCCTCCTCCTACGCCGCCGCCGCCGCCGCCGACGACGACGACGACGATGACGTCCGACGCGTCGCCGCAGCCCATCCAGAGCGCCAAGTCAGCCGTGGAGTCCCTCGCCGCCGTCCTCGGTGCCGCGCTCCCGGGCACCCTCGCCTCGGCCGACGACCCCGCGAACGCGCTCCTCCACGACGCCGGCGTCGCCCGCGCCGTGGTGGGGCGCCTCCGCAGGGAAGGGTCGGGCGCCGGGAACGACGGGCTCTGCCGGTGGCTCTACGACGCGTTCCAGTCGAACCTCCCGGAGATCCAGCTCGCCGTGCTCCGCTTCGTCCCGGCCCTCGCCGGCGTGTACATGTCCCGCGCCGTCTCGAGGAAGCCGCTCGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCACGCCGCGGCGCAGCGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAACCCCAGCGTGTACCACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTCGCCGTGCTCTCCCCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGGATTGTCGGCGCCGTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCCAAGATGGAATTCTGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGACAAGCCGCGCGTCGCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTGCCATTGCCATGGGAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGCCCGACGAACTCCGACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGGAGAGCCGCGGAGACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTGTCCCAGATGACGGAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAACATGGCGGAGCTGGAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGAACTGAACTGAACGCAGTTGAATTAGTCGTCAGGATTCAGGAATTTGATCAGACACTCACACTGCAACACGAATTACAAGTTAAGTTACAACGCACACTGCAAGCCTGCAAAAGTTAGCAGTGTTGGCGCTTTTGTTAGTCAGGTACCTAGCACAAGTCTTCTCTCTAATGTGAGAAATTGAGAGATTGATCAGTAGATGGTGTACAGGTCTCTTCTCTCTGATGTGAGAAACCGAGAGATTGATCGGTAGATGTCTAGATGTTGTGTTATTGTGTTACTGGCCACAGAATATTCAGTCTGGATGTTTCTTTGATCACAAAATATTCAGTCTGGATGTTTAACAGACAAGTATTCATTTGGTTTCATGAATGGAAGTACTATTGCATT]

[+] EMBL AK071718             [TCCGATCTCTCGCTTTCCTTTCCCCACCACAGAGCCGCGCCTCCGACGCGATCACCCTAAACTTCTCGATCTCCTCCTCCTACGCCGCCGCCGCCGCCGCCGACGACGACGACGACGATGACGTCCGACGCGTCGCCGCAGCCCATCCAGAGCGCCAAGTCAGCCGTGGAGTCCCTCGCCGCCGTCCTCGGTGCCGCGCTCCCGGGCACCCTCGCCTCGGCCGACGACCCCGCGAACGCGCTCCTCCACGACGCCGGCGTCGCCCGCGCCGTGGTGGGGCGCCTCCGCAGGGAAGGGTCGGGCGCCGGGAACGACGGGCTCTGCCGGTGGCTCTACGACGCGTTCCAGTCGAACCTCCCGGAGATCCAGCTCGCCGTGCTCCGCTTCGTCCCGGCCCTCGCCGGCGTGTACATGTCCCGCGCCGTCTCGAGGAAGCCGCTCGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCACGCCGCGGCGCAGCGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAACCCCAGCGTGTACCACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTCGCCGTGCTCTCCCCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGGATTGTCGGCGCCGTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCCAAGATGGAATTCTGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGACAAGCCGCGCGTCGCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTGCCATTGCCATGGGAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGCCCGACGAACTCCGACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGGAGAGCCGCGGAGACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTGTCCCAGATGACGGAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAACATGGCGGAGCTGGAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGAACTGAACTGAACGCAGTTGAATTAGTCGTCAGGATTCAGGAATTTGATCAGACACTCACACTGCAACACGAATTACAAGTTAAGTTACAACGCACACTGCAAGCCTGCAAAAGTTAGCAGTGTTGGCGCTTTTGTTAGTCAGGTACCTAGCACAAGTCTTCTCTCTAATGTGAGAAATTGAGAGATTGATCAGTAGATGGTGTACAGGTCTCTTCTCTCTGATGTGAGAAACCGAGAGATTGATC                                                                                                                                              ]
[+] EMBL AK069866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCACGCCGCGGCGCAGCGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAACCCCAGCGTGTACCACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTCGCCGTGCTCTCCCCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGGATTGTCGGCGCCGTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCCAAGATGGAATTCTGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGACAAGCCGCGCGTCGCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTGCCATTGCCATGGGAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGCCCGACGAACTCCGACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGGAGAGCCGCGGAGACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTGTCCCAGATGACGGAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAACATGGCGGAGCTGGAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGAACTGAACTGAACGCAGTTGAATTAGTCGTCAGGATTCAGGAATTTGATCAGACACTCACACTGCAACACGAATTACAAGTTAAGTTACAACGCACACTGCAAGCCTGCAAAAGTTAGCAGTGTTGGCGCTTTTGTTAGTCAGGTACCTAGCACAAGTCTTCTCTCTAATGTGAGAAATTGAGAGATTGATCAGTAGATGGTGTACAGGTCTCTTCTCTCTGATGTGAGAAACCGAGAGATTGATCGGTAGATGTCTAGATGTTGTGTTATTGTGTTACTGGCCACAGAATATTCAGTCTGGATGTTTCTTTGATCACAAAATATTCAGTCTGGATGTTTAACAGACAAGTATTCATTTGGTTTCATGAATGGAAGTACTATTGCATT]


>consensus_2513#0 TCCGATCTCTCGCTTTCCTTTCCCCACCACAGAGCCGCGCCTCCGACGCGATCACCCTAA ACTTCTCGATCTCCTCCTCCTACGCCGCCGCCGCCGCCGCCGACGACGACGACGACGATG ACGTCCGACGCGTCGCCGCAGCCCATCCAGAGCGCCAAGTCAGCCGTGGAGTCCCTCGCC GCCGTCCTCGGTGCCGCGCTCCCGGGCACCCTCGCCTCGGCCGACGACCCCGCGAACGCG CTCCTCCACGACGCCGGCGTCGCCCGCGCCGTGGTGGGGCGCCTCCGCAGGGAAGGGTCG GGCGCCGGGAACGACGGGCTCTGCCGGTGGCTCTACGACGCGTTCCAGTCGAACCTCCCG GAGATCCAGCTCGCCGTGCTCCGCTTCGTCCCGGCCCTCGCCGGCGTGTACATGTCCCGC GCCGTCTCGAGGAAGCCGCTCGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCAC GCCGCGGCGCAGCGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAAC CCCAGCGTGTACCACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTC GCCGTGCTCTCCCCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGG ATTGTCGGCGCCGTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCC AAGATGGAATTCTGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGAC AAGCCGCGCGTCGCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTG CCATTGCCATGGGAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGC CCGACGAACTCCGACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGG AGAGCCGCGGAGACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTG TCCCAGATGACGGAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAAC ATGGCGGAGCTGGAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGAACTGAACTG AACGCAGTTGAATTAGTCGTCAGGATTCAGGAATTTGATCAGACACTCACACTGCAACAC GAATTACAAGTTAAGTTACAACGCACACTGCAAGCCTGCAAAAGTTAGCAGTGTTGGCGC TTTTGTTAGTCAGGTACCTAGCACAAGTCTTCTCTCTAATGTGAGAAATTGAGAGATTGA TCAGTAGATGGTGTACAGGTCTCTTCTCTCTGATGTGAGAAACCGAGAGATTGATCGGTA GATGTCTAGATGTTGTGTTATTGTGTTACTGGCCACAGAATATTCAGTCTGGATGTTTCT TTGATCACAAAATATTCAGTCTGGATGTTTAACAGACAAGTATTCATTTGGTTTCATGAA TGGAAGTACTATTGCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)