cluster # 2527

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Oryza sativa
cluster # 2527 cluster # 2527 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2527#0 length = 1881 sequences # 2
consensusID : consensus_2527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1881
fasta sequence
                              [GTAATATTTCTTTTGTTATAACAAATTTGTTTTGCGTGGTTTATTGTAAAATTAGTGATGTAACAAATAATGTGCCCGCGCAACGCGCGGGCCGGGCATCACCTAGTTAGGGCACCCACAATGTTGTAAAAAACCAGGTAGTAAGCATTAAATGGTTGCTTACTACCTGGTATTAGTCATTGTGGGAGTAGTTCATTCTTAAAGCCAGGAAGTAGCGCTGCTGCCGGCAAGAAGGGAATAAAAAATGAAATGTGTACAGTGGAGTTCTGACAAAAAATTTTAAATTGCAAGTAGCCGTTGCTTCTTCCAACCGTTGCTCTCCTCCCCAGCCAACCGTTGCATGGACTGTTCTTCTTGCCATCTTCATCTCCTACAAAAACAGAGATGGCTCATAATTTCTTTGAATCAACACAAACACATTCTGTGAAACTTAGCTAGCTGAGAGCTTGAGATGGATCCCTCCAAGAGAGGTTTCATGAACTTGTTAAACCAAGGCTCTCCAAGCCAACAATCTAGCCAAAACTCCCCTCCTACTCAATTCCCCTCAACTTTCTCCCAATCACAATTTCCCCAATCCCCACATTTTACCCAAGCCTCACCACCTAATTTCCAAACCTTCAACCCTTTTGGCCCTCCAGCCAACTATCACCTATATGGTAGTTCTCCTCCAAACTTTCAAGGTTTTCTGCAGCAAGCAAGCTGGTTACAATCTGCACCAATAAGCTTTCAAGGTTTTCGTCCCCAAGAAAGTTGGATGCACTCACCAAATCAAGTTGTCGGGTCCGCCTCATCTCATGGATCCAAATCAGCCTCTCAGTGCCCTGCAAGACAGGAAGAGAACAATTTGGTTAACATCGAAGAGTCAAGTGACAATAGCCAAGAGACAGGGAGAAGAGGGACACACGTCAACTGGACCGAAGAAGAAAACTTACGACTCCTCAGCTCTTGGTTGAATAACTCACTAGATTCTATAAATGGCAATGACAAGAAGGGAGAATACTATTGGAGGGATGTTGCTGCAGAGTTCAATGGTAATGCATCTAGCAATAACCGCAAAAGGACAGTCGTGCAATGCAAGACACATTGGGGTGGTGTTAAGAAGGACATTGCAAAATTTTGTGGAGCTTATTCTCGAGCTAGAAGAACCTGGAGCAGTGGATTCTCTGATGATATGATCATGGAGAAAGCCCATGCATTATATAAATCAGAAAACAATGATAAAACTTTTACATTAGAGTATATGTGGAGAGAATTAAAGGATCAACCAAAATGGCGACGGATACTTGAAGAGGACAGCAAGAACAAGAGGACTAAGATTTCTGAATCTGGTGCATATACATCATCATCCAACCAAGAAACTGAGGAGGAGACCAGCCGAAAAGAGAAGCGTCCTGAAGGGCAGAAAAAAGCCAAAGCCAAGCTTAAAGGGAAAGGAAAAAAACCTGCACCGTCTCCTTTGGGGGACCAGCCATCTCAAGATTTTGTTCTCTTCAACGAAGCTGTAAAATTGAGAGCAGAAGCAGTGCTGAAATCTGCAGAAGCAACCACCAAATCAGCGGAAGCAAAGAAGGAACAAACTAGGATGGAGAAGTATCAGACATATTTAAAGTTGTTGGACAAAGACACTGCCAATTTTAGTGATGCAAAACTCAAGAGGCATGAAGCTGTCCTCGAAAAGCTAGCTACAGAACTTGCAGAAGAATAGAAGATCCCTAAGTTATGTTTGTACCCCTAGTACTTAGTGTGTCACTGTTTCATTAAGTTTAACTTGCTAGTAATAT-TTAGACTTGTGATAGGTTTGTAGGGCAAGTAATTGTTGTATTGTGAACGCAGTGAATGATGAATGTAATATTTCACTAGTGAGAAGGCATATGAAGTGAT]

[+] EMBL AK064584             [GTAATATTTCTTTTGTTATAACAAATTTGTTTTGCGTGGTTTATTGTAAAATTAGTGATGTAACAAATAATGTGCCCGCGCAACGCGCGGGCCGGGCATCACCTAGTTAGGGCACCCACAATGTTGTAAAAAACCAGGTAGTAAGCATTAAATGGTTGCTTACTACCTGGTATTAGTCATTGTGGGAGTAGTTCATTCTTAAAGCCAGGAAGTAGCGCTGCTGCCGGCAAGAAGGGAATAAAAAATGAAATGTGTACAGTGGAGTTCTGACAAAAAATTTTAAATTGCAAGTAGCCGTTGCTTCTTCCAACCGTTGCTCTCCTCCCCAGCCAACCGTTGCATGGACTGTTCTTCTTGCCATCTTCATCTCCTACAAAAACAGAGATGGCTCATAATTTCTTTGAATCAACACAAACACATTCTGTGAAACTTAGCTAGCTGAGAGCTTGAGATGGATCCCTCCAAGAGAGGTTTCATGAACTTGTTAAACCAAGGCTCTCCAAGCCAACAATCTAGCCAAAACTCCCCTCCTACTCAATTCCCCTCAACTTTCTCCCAATCACAATTTCCCCAATCCCCACATTTTACCCAAGCCTCACCACCTAATTTCCAAACCTTCAACCCTTTTGGCCCTCCAGCCAACTATCACCTATATGGTAGTTCTCCTCCAAACTTTCAAGGTTTTCTGCAGCAAGCAAGCTGGTTACAATCTGCACCAATAAGCTTTCAAGGTTTTCGTCCCCAAGAAAGTTGGATGCACTCACCAAATCAAGTTGTCGGGTCCGCCTCATCTCATGGATCCAAATCAGCCTCTCAGTGCCCTGCAAGACAGGAAGAGAACAATTTGGTTAACATCGAAGAGTCAAGTGACAATAGCCAAGAGACAGGGAGAAGAGGGACACACGTCAACTGGACCGAAGAAGAAAACTTACGACTCCTCAGCTCTTGGTTGAATAACTCACTAGATTCTATAAATGGCAATGACAAGAAGGGAGAATACTATTGGAGGGATGTTGCTGCAGAGTTCAATGGTAATGCATCTAGCAATAACCGCAAAAGGACAGTCGTGCAATGCAAGACACATTGGGGTGGTGTTAAGAAGGACATTGCAAAATTTTGTGGAGCTTATTCTCGAGCTAGAAGAACCTGGAGCAGTGGATTCTCTGATGATATGATCATGGAGAAAGCCCATGCATTATATAAATCAGAAAACAATGATAAAACTTTTACATTAGAGTATATGTGGAGAGAATTAAAGGATCAACCAAAATGGCGACGGATACTTGAAGAGGACAGCAAGAACAAGAGGACTAAGATTTCTGAATCTGGTGCATATACATCATCATCCAACCAAGAAACTGAGGAGGAGACCAGCCGAAAAGAGAAGCGTCCTGAAGGGCAGAAAAAAGCCAAAGCCAAGCTTAAAGGGAAAGGAAAAAAACCTGCACCGTCTCCTTTGGGGGACCAGCCATCTCAAGATTTTGTTCTCTTCAACGAAGCTGTAAAATTGAGAGCAGAAGCAGTGCTGAAATCTGCAGAAGCAACCACCAAATCAGCGGAAGCAAAGAAGGAACAAACTAGGATGGAGAAGTATCAGACATATTTAAAGTTGTTGGACAAAGACACTGCCAATTTTAGTGATGCAAAACTCAAGAGGCATGAAGCTGTCCTCGAAAAGCTAGCTACAGAACTTGCAGAAGAATAGAAGATCCCTAAGTTATGTTTGTACCCCTAGTACTTAGTGTGTCACTGTTTCATTAAGTTTAACTTGCTAGTAATAT TTAGACTTGTGATAGGTTTGTAGGGCAAGTAATTGTTGTATTGTGAACGCAGTGAATGATGAATGTAATATTTCACTAGTGAGAAGGCATATGAAGTGAT]
[-] EMBL CA762781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGAAACCAATGATAAACCTTTTCCTTTAGGGTATATG GGAGAGAATTAAAGGATCAACCAAAATGGCGACGGGTACTTGAAGAGGACAGCAAGAACAAGAGGACTAAGATTTCTGAATCTGGTGCATATACATCATCATCCAACCAAGAAACTGAGGAGGAGACCAGCCGAAAAGAGAAGCGTCCTGAAGGGCAGAAAAGAGCCAAAGCCAAGCTTAAAGGGAAAGGAAAAAAACCTGCACCGTCTCCTTTGGGGGACCAGCCATCTCAAGATTTTGTTCTCTTCAACGAAGCTGTAAAATTGAGAGCAGAAGCAGTGCTGAAATCTGCAGAAGCAACCACCAAATCAGCGGAAGCAAAGAAGGAACAAACTAGGATGGAGAAGTATCAGACATATTTAAAGTTGTTGGACAAAGACACTGCCAATTTTAGTGATGCAAAACTCAAGAGGCATGAAGCTGTCCTCGAAAAGCTAGCTACAGAACTTGCAGAAGAATAGAAGATCCCTAAGTTATGTCTGTACCCCTAGTACTTAGTGTGTCACTGTTTCATTAAGTTTAACTTGCTAGTAATATATTAGACTTGTGATAGGTTTGTAGGGCAAGTAATTGTTGTATTGTGAACTCAGTGAATGATGAATGTAATATTTCACTAGTGAGAAGGCAaaaaaaa    ]




>consensus_2527#0
GTAATATTTCTTTTGTTATAACAAATTTGTTTTGCGTGGTTTATTGTAAAATTAGTGATG
TAACAAATAATGTGCCCGCGCAACGCGCGGGCCGGGCATCACCTAGTTAGGGCACCCACA
ATGTTGTAAAAAACCAGGTAGTAAGCATTAAATGGTTGCTTACTACCTGGTATTAGTCAT
TGTGGGAGTAGTTCATTCTTAAAGCCAGGAAGTAGCGCTGCTGCCGGCAAGAAGGGAATA
AAAAATGAAATGTGTACAGTGGAGTTCTGACAAAAAATTTTAAATTGCAAGTAGCCGTTG
CTTCTTCCAACCGTTGCTCTCCTCCCCAGCCAACCGTTGCATGGACTGTTCTTCTTGCCA
TCTTCATCTCCTACAAAAACAGAGATGGCTCATAATTTCTTTGAATCAACACAAACACAT
TCTGTGAAACTTAGCTAGCTGAGAGCTTGAGATGGATCCCTCCAAGAGAGGTTTCATGAA
CTTGTTAAACCAAGGCTCTCCAAGCCAACAATCTAGCCAAAACTCCCCTCCTACTCAATT
CCCCTCAACTTTCTCCCAATCACAATTTCCCCAATCCCCACATTTTACCCAAGCCTCACC
ACCTAATTTCCAAACCTTCAACCCTTTTGGCCCTCCAGCCAACTATCACCTATATGGTAG
TTCTCCTCCAAACTTTCAAGGTTTTCTGCAGCAAGCAAGCTGGTTACAATCTGCACCAAT
AAGCTTTCAAGGTTTTCGTCCCCAAGAAAGTTGGATGCACTCACCAAATCAAGTTGTCGG
GTCCGCCTCATCTCATGGATCCAAATCAGCCTCTCAGTGCCCTGCAAGACAGGAAGAGAA
CAATTTGGTTAACATCGAAGAGTCAAGTGACAATAGCCAAGAGACAGGGAGAAGAGGGAC
ACACGTCAACTGGACCGAAGAAGAAAACTTACGACTCCTCAGCTCTTGGTTGAATAACTC
ACTAGATTCTATAAATGGCAATGACAAGAAGGGAGAATACTATTGGAGGGATGTTGCTGC
AGAGTTCAATGGTAATGCATCTAGCAATAACCGCAAAAGGACAGTCGTGCAATGCAAGAC
ACATTGGGGTGGTGTTAAGAAGGACATTGCAAAATTTTGTGGAGCTTATTCTCGAGCTAG
AAGAACCTGGAGCAGTGGATTCTCTGATGATATGATCATGGAGAAAGCCCATGCATTATA
TAAATCAGAAAACAATGATAAAACTTTTACATTAGAGTATATGTGGAGAGAATTAAAGGA
TCAACCAAAATGGCGACGGATACTTGAAGAGGACAGCAAGAACAAGAGGACTAAGATTTC
TGAATCTGGTGCATATACATCATCATCCAACCAAGAAACTGAGGAGGAGACCAGCCGAAA
AGAGAAGCGTCCTGAAGGGCAGAAAAAAGCCAAAGCCAAGCTTAAAGGGAAAGGAAAAAA
ACCTGCACCGTCTCCTTTGGGGGACCAGCCATCTCAAGATTTTGTTCTCTTCAACGAAGC
TGTAAAATTGAGAGCAGAAGCAGTGCTGAAATCTGCAGAAGCAACCACCAAATCAGCGGA
AGCAAAGAAGGAACAAACTAGGATGGAGAAGTATCAGACATATTTAAAGTTGTTGGACAA
AGACACTGCCAATTTTAGTGATGCAAAACTCAAGAGGCATGAAGCTGTCCTCGAAAAGCT
AGCTACAGAACTTGCAGAAGAATAGAAGATCCCTAAGTTATGTTTGTACCCCTAGTACTT
AGTGTGTCACTGTTTCATTAAGTTTAACTTGCTAGTAATATTTAGACTTGTGATAGGTTT
GTAGGGCAAGTAATTGTTGTATTGTGAACGCAGTGAATGATGAATGTAATATTTCACTAG
TGAGAAGGCATATGAAGTGAT
clustalw multiple alignements is not computed in this case