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Oryza sativa
cluster # 2543 cluster # 2543       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2543#0 length = 1165 sequences # 2  

consensusID : consensus_2543#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1165
fasta sequence
                              [TTAGTGCAGGTGAAGAGGAGGAGACCGGAGGAGGGGAAGAGGGGGAGGAGGATGGGATCTGGGATTGGAGCCGTGCTGGTGCTTGTTGCAGCATGGCTAACATTTGCGCCGCCTGGTGCTCTGGCTTCTTCGCGCAGGTTTGATCTGAGTATTGCACAAGAAAAGTTAGTGAACTCCACAGGTGGTTCAACTGCTTCAAGCTCACACCTTGTTTTTGATCCTTCAAAATCAAAGAGACTCTCATGGCATCCAAGGATCTTCTTGTATGAAGGTTTTCTTTCTGACATGGAGTGTGACCATTTAGTATCTATGGGACGTGGTAATATGGAGTCATCTTTAGCATTTACTGATGGTGATAGAAATAGTTCGTATAACAACATTGAGGATATAGTTGTTTCCAAGATTGAGGACAGGATATCGCTATGGAGCTTTCTTCCAAAAGAAAATGGAGAGAGCATTCAGGTCTTGAAGTATGGAGTGAACAGAAGTGGCAGTATCAAGGAGGAACCTAAATCAAGCAGTGGTGCCCATAGGCTTGCGACCATTTTGATGTATCTTTCTGATGTCAAGCAAGGTGGTGAAACTGTTTTCCCCAGATCTGAGATGAAGGATGCTCAAGCTAAGGAGGGGGCACCATCTCAATGTTCTGGTTATGCAGTGCGACCAGCCAAGGGCAATGCAATACTGCTGTTCAATTTAAGGCCTGATGGAGAAACAGATAAGGATAGCCAATATGAAGAATGTCCTGTCCTCGAAGGAGAGAAATGGCTAGCCATAAAACATATAAATTTGAGAAAATTTGATTATCCAAAATCATCACTTGCATCCGAGGATGAGTGCACAGATGAAGATGATAGGTGTGTGAGTTGGGCTGCTAGTGGTGAGTGTGACAGGAATCCGGTGTTTATGATAGGAAGCTCAGACTACTATGGCTCTTGCCGAAAGAGCTGTCGAGTGTGCTGATTATTTTGCAATTTTTTGCTAGTAGAAATATTGATGTCATAGGCAGAGAATGGTGTAACAAACTGTATATGTTGCCCGTTTTTCTTTTATGATTTACTTTGCGTTTGTTAGGAAATTTAATTTGGAGTTAATGGATTGACCACTGTTCCCAAATTATGGAAAATAATTTTGTTCCATCAGATGATAATGATATATGCACATC]

[+] EMBL AK070484             [TTAGTGCAGGTGAAGAGGAGGAGACCGGAGGAGGGGAAGAGGGGGAGGAGGATGGGATCTGGGATTGGAGCCGTGCTGGTGCTTGTTGCAGCATGGCTAACATTTGCGCCGCCTGGTGCTCTGGCTTCTTCGCGCAGGTTTGATCTGAGTATTGCACAAGAAAAGTTAGTGAACTCCACAGGTGGTTCAACTGCTTCAAGCTCACACCTTGTTTTTGATCCTTCAAAATCAAAGAGACTCTCATGGCATCCAAGGATCTTCTTGTATGAAGGTTTTCTTTCTGACATGGAGTGTGACCATTTAGTATCTATGGGACGTGGTAATATGGAGTCATCTTTAGCATTTACTGATGGTGATAGAAATAGTTCGTATAACAACATTGAGGATATAGTTGTTTCCAAGATTGAGGACAGGATATCGCTATGGAGCTTTCTTCCAAAAGAAAATGGAGAGAGCATTCAGGTCTTGAAGTATGGAGTGAACAGAAGTGGCAGTATCAAGGAGGAACCTAAATCAAGCAGTGGTGCCCATAGGCTTGCGACCATTTTGATGTATCTTTCTGATGTCAAGCAAGGTGGTGAAACTGTTTTCCCCAGATCTGAGATGAAGGATGCTCAAGCTAAGGAGGGGGCACCATCTCAATGTTCTGGTTATGCAGTGCGACCAGCCAAGGGCAATGCAATACTGCTGTTCAATTTAAGGCCTGATGGAGAAACAGATAAGGATAGCCAATATGAAGAATGTCCTGTCCTCGAAGGAGAGAAATGGCTAGCCATAAAACATATAAATTTGAGAAAATTTGATTATCCAAAATCATCACTTGCATCCGAGGATGAGTGCACAGATGAAGATGATAGGTGTGTGAGTTGGGCTGCTAGTGGTGAGTGTGACAGGAATCCGGTGTTTATGATAGGAAGCTCAGACTACTATGGCTCTTGCCGAAAGAGCTGTCGAGTGTGCTGATTATTTTGCAATTTTTTGCTAGTAGAAATATTGATGTCATAGGCAGAGAATGGTGTAACAAACTGTATATGTTGCCCGTTTTTCTTTTATGATTTACTTTGCGTTTGTTAGGAAATTTAATTTGGAGTTAATGGATTGACCACTGTTCCCAAATTATGGAAAATAATTTTGTTCCATCAGATGATAATGATATATGCACATC]
[+] EMBL AK104673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGTGCCCATAGGCTTGCGACCATTTTGATGTATCTTTCTGATGTCAAGCAAGGTGGTGAAACTGTTTTCCCCAGATCTGAGATGAAGGATGCTCAAGCTAAGGAGGGGGCACCATCTCAATGTTCTGGTTATGCAGTGCGACCAGCCAAGGGCAATGCAATACTGCTGTTCAATTTAAGGCCTGATGGAGAAACAGATAAGGATAGCCAATATGAAGAATGTCCTGTCCTCGAAGGAGAGAAATGGCTAGCCATAAAACATATAAATTTGAGAAAATTTGATTATCCAAAATCATCACTTGCATCCGAGGATGAGTGCACAGATGAAGATGATAGGTGTGTGAGTTGGGCTGCTAGTGGTGAGTGTGACAGGAATCCGGTGTTTATGATAGGAAGCTCAGACTACTATGGCTCTTGCCGAAAGAGCTGTCGAGTGTGCTGATTATTTTGCAATTTTTTGCTAGTAGAAATATTGATGTCATAGGCAGAGAATGGTGTAACAAACTGTATATGTTGCCCGTTTTTCTTTTATGATTTACTTTGCGTTTGTTAGGAAATTTAATTTGGAGTTAATGGATTGACCACTGTTCCCAAATTATGGAAAATAATTTTGTTCC                           ]


>consensus_2543#0 TTAGTGCAGGTGAAGAGGAGGAGACCGGAGGAGGGGAAGAGGGGGAGGAGGATGGGATCT GGGATTGGAGCCGTGCTGGTGCTTGTTGCAGCATGGCTAACATTTGCGCCGCCTGGTGCT CTGGCTTCTTCGCGCAGGTTTGATCTGAGTATTGCACAAGAAAAGTTAGTGAACTCCACA GGTGGTTCAACTGCTTCAAGCTCACACCTTGTTTTTGATCCTTCAAAATCAAAGAGACTC TCATGGCATCCAAGGATCTTCTTGTATGAAGGTTTTCTTTCTGACATGGAGTGTGACCAT TTAGTATCTATGGGACGTGGTAATATGGAGTCATCTTTAGCATTTACTGATGGTGATAGA AATAGTTCGTATAACAACATTGAGGATATAGTTGTTTCCAAGATTGAGGACAGGATATCG CTATGGAGCTTTCTTCCAAAAGAAAATGGAGAGAGCATTCAGGTCTTGAAGTATGGAGTG AACAGAAGTGGCAGTATCAAGGAGGAACCTAAATCAAGCAGTGGTGCCCATAGGCTTGCG ACCATTTTGATGTATCTTTCTGATGTCAAGCAAGGTGGTGAAACTGTTTTCCCCAGATCT GAGATGAAGGATGCTCAAGCTAAGGAGGGGGCACCATCTCAATGTTCTGGTTATGCAGTG CGACCAGCCAAGGGCAATGCAATACTGCTGTTCAATTTAAGGCCTGATGGAGAAACAGAT AAGGATAGCCAATATGAAGAATGTCCTGTCCTCGAAGGAGAGAAATGGCTAGCCATAAAA CATATAAATTTGAGAAAATTTGATTATCCAAAATCATCACTTGCATCCGAGGATGAGTGC ACAGATGAAGATGATAGGTGTGTGAGTTGGGCTGCTAGTGGTGAGTGTGACAGGAATCCG GTGTTTATGATAGGAAGCTCAGACTACTATGGCTCTTGCCGAAAGAGCTGTCGAGTGTGC TGATTATTTTGCAATTTTTTGCTAGTAGAAATATTGATGTCATAGGCAGAGAATGGTGTA ACAAACTGTATATGTTGCCCGTTTTTCTTTTATGATTTACTTTGCGTTTGTTAGGAAATT TAATTTGGAGTTAATGGATTGACCACTGTTCCCAAATTATGGAAAATAATTTTGTTCCAT CAGATGATAATGATATATGCACATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)