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Oryza sativa
cluster # 2553 cluster # 2553       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2553#0 length = 2361 sequences # 2  

consensusID : consensus_2553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2361
fasta sequence
                              [CACAGCCGCCGCCTTTCTCGTCGCCACCTCTACCACCGTCGTCGCCGCCGCCTTAGCCGCCGCCGCCGTTTTCGCCCCTGTTGGCCGCCGTTCCCCCGCCTTTCCGCCGCCGCCTCTGCCGCCTCCGCCTCAACCGCCGCCTCCTCCTTAGTCTCCTGCCGCAGCCATCCCTCCGTTCGCCGGCGATTTGCCGGCCGGGTTAGGCCGTCACCCCCCACTCCTCATTGGAGTCGGAGGCCGGCCGGACCCGGATGCAGTTCCCCATGACCCCATTTGCTAGGGTCCGGCTAGGAGATCCGTGGGGAACGACAATCGTGGCGCGGAGGACGGGACGGCGCGCAGCGGCGGCACCGGCGTATGGGCGCGACGAAGGAGGAGTGAAGAGCGGCGGTTCCCCCCTGCGCATGGCAAGTGTCCCGGTCCGGCCGTAGCCCGGCGGCTCGGGAGTGGGGAAGCGACTTCGGCGTGGTGGCAGTGGAGGTGGCTGAGCGGCTACCGGTGGCGTGGGAGTTGGGAATCAGCGTCGTCGTGGGGGCGGTGTCGGGGATGTCGGAGACAGCGACGAACGGAGCCGGCGACGACTCCATCTCCAGTGGGAGGGTGCAAAGCTCGCCACCGGGAGAGGCCACCGCCGTCCATCCATGGGTGGTACAATACTGTACCCCCTGGACTTGGACGCGGTTAGGAGGTCCGGCGTTCATCGAGGCAGTTATTGGAGGAGAAGGTGCAGCGATCGGTGGAGAAGGAGTAGGCGCGTCAGGGACCAGCGGGGCAGGCACGATCGGAGTGGCAGACATACGGCGGCGAGGGTAGTGGCGCCGGCCACCAACCCCCACCATGAGATCCCGGCGCGTCCTCCTTGTCGATCGTCGATGAAGATGGCAAAGACGGCGTGCGTGATCATGGCGAGGGATGCCGAGAATGGCATCGAGGATGGAAATAAAGGTAGACATACCTTCTGTTCTTCGCTTTTCCTGTAGATCAAAAAAGCGAGGTTTCTTCCTTCTTTCTTTCACTTCGAGATCTCCTTCGCGAGAGCGAAAGTTCTGATAACGTGTTGAAAGTGTATAAGATTGATTGAGCGAGAGGGATTGAGTGAGAGAGAGAATTGCACACAAGAATATAGAGAATGAATGAGCGGAATCTTTATTGATCAATGCGGTACAATATATAGATGGGAAAGTGGTGGCAACCGGAGACGCGATGGTTTGGGAACCATCGCGTCCGTTGCTAGAATCGCCGTGAGGCGAGAAGAGGTGTGGGGCACGACCAACCGTCGTGGATTGCTGCTCTATCCATATAGATGGATGAGATCACCCAAATATTTCATAACAACATATACGGAGTTTTTGTTTGCATGCTTTCCCAGCCCACAGTTAACATGAGAAAAGTATTAGTTTTTTAAAAAATAATATATCCAATCTAATGGTCTAAAATATTCCACAAATTTAAGTAGATTAAACAATGCTATGTGGCGATCTAGGAGCGTTTATAGGAGCGCCACGTGACGGCTTATGAGCGTTTGTAGAAAGTTTAATGGACTTTTAGTATATAATAGTATATAATAGATAGATATGATAATTTTATATGGTACTCTCTTCATTCCAATTTGATCATCATCTAATACTTTTGAGATTTTTCTGCAAATGATCATCACCTACCAAAATGTCTCTTTTTAATTTATGTAAAGAGTAGATTTGCATCGTGAAATATCCTGCGTGCATACAACATTTAAAACGTAAATTAATTTTTTGTTGGACACAAAACAATATTGCACCTTGATCGATAAGAATTAATTTCAAAATGATAGATATTTCGGTCTCATAGCTCTTGGTGTCATTTGCTTAAGGAATGATTAAATTGGGATAGATAAAGTATATAAAGTAAAGAAGCTGAAAAGCAGAGAGGCAGAAGGGGGAAACAAGCTAATTAACCAAACATTCTTTCTGGTGCTAAACGGCAGCTATACCATCTTCCCTTTTTTTTCTTATGAGCTCGACTAACCAATATGATATCGACTAACACACTGTATAAATCGACTAACCAATTGAGTTCACCGCTTGTAATCAGTAGGATCAGCATGTTCACCAGTTCAGCACGTAGCATCAGCAGGCAAATTATTTTGAGTGTTCCTAGACATTAACCGCATAAATCCCACGAACAGCAGTGAGCCTGCCTGCAGCTTTCCGCAACTGCAGCTCTCTTGGACGTCGCTGAGATTGTTCAAATGTGCGGTAGGAATGCCATCTTTATTGCTTACAACTGATGTGTAACGATGTTCCTTCCCCATGTCTCGCATTGCCCACCGTTAATTCTTATTCTTCTCCAATTAACCCGCTTGGACACTGAATATATATGTTT]

[+] EMBL AK070708             [CACAGCCGCCGCCTTTCTCGTCGCCACCTCTACCACCGTCGTCGCCGCCGCCTTAGCCGCCGCCGCCGTTTTCGCCCCTGTTGGCCGCCGTTCCCCCGCCTTTCCGCCGCCGCCTCTGCCGCCTCCGCCTCAACCGCCGCCTCCTCCTTAGTCTCCTGCCGCAGCCATCCCTCCGTTCGCCGGCGATTTGCCGGCCGGGTTAGGCCGTCACCCCCCACTCCTCATTGGAGTCGGAGGCCGGCCGGACCCGGATGCAGTTCCCCATGACCCCATTTGCTAGGGTCCGGCTAGGAGATCCGTGGGGAACGACAATCGTGGCGCGGAGGACGGGACGGCGCGCAGCGGCGGCACCGGCGTATGGGCGCGACGAAGGAGGAGTGAAGAGCGGCGGTTCCCCCCTGCGCATGGCAAGTGTCCCGGTCCGGCCGTAGCCCGGCGGCTCGGGAGTGGGGAAGCGACTTCGGCGTGGTGGCAGTGGAGGTGGCTGAGCGGCTACCGGTGGCGTGGGAGTTGGGAATCAGCGTCGTCGTGGGGGCGGTGTCGGGGATGTCGGAGACAGCGACGAACGGAGCCGGCGACGACTCCATCTCCAGTGGGAGGGTGCAAAGCTCGCCACCGGGAGAGGCCACCGCCGTCCATCCATGGGTGGTACAATACTGTACCCCCTGGACTTGGACGCGGTTAGGAGGTCCGGCGTTCATCGAGGCAGTTATTGGAGGAGAAGGTGCAGCGATCGGTGGAGAAGGAGTAGGCGCGTCAGGGACCAGCGGGGCAGGCACGATCGGAGTGGCAGACATACGGCGGCGAGGGTAGTGGCGCCGGCCACCAACCCCCACCATGAGATCCCGGCGCGTCCTCCTTGTCGATCGTCGATGAAGATGGCAAAGACGGCGTGCGTGATCATGGCGAGGGATGCCGAGAATGGCATCGAGGATGGAAATAAAGGTAGACATACCTTCTGTTCTTCGCTTTTCCTGTAGATCAAAAAAGCGAGGTTTCTTCCTTCTTTCTTTCACTTCGAGATCTCCTTCGCGAGAGCGAAAGTTCTGATAACGTGTTGAAAGTGTATAAGATTGATTGAGCGAGAGGGATTGAGTGAGAGAGAGAATTGCACACAAGAATATAGAGAATGAATGAGCGGAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK103789             [ ACAGCCGCCGCCTTTCTCGTCGCCACCTCTACCACCGTCGTCGCCGCCGCCTTAGCCGCCGCCGCCGTTTTCGCCCCTGTTGGCCGCCGTTCCCCCGCCTTTCCGCCGCCGCCTCTGCCGCCTCCGCCTCAACCGCCGCCTCCTCCTTAGTCTCCTGCCGCAGCCATCCCTCCGTTCGCCGGCGATTTGCCGGCCGGGTTAGGCCGTCACCCCCCACTCCTCATTGGAGTCGGAGGCCGGCCGGACCCGGATGCAGTTCCCCATGACCCCATTTGCTAGGGTCCGGCTAGGAGATCCGTGGGGAACGACAATCGTGGCGCGGAGGACGGGACGGCGCGCAGCGGCGGCACCGGCGTATGGGCGCGACGAAGGAGGAGTGAAGAGCGGCGGTTCCCCCCTGCGCATGGCAAGTGTCCCGGTCCGGCCGTAGCCCGGCGGCTCGGGAGTGGGGAAGCGACTTCGGCGTGGTGGCAGTGGAGGTGGCTGAGCGGCTACCGGTGGCGTGGGAGTTGGGAATCAGCGTCGTCGTGGGGGCGGTGTCGGGGATGTCGGAGACAGCGACGAACGGAGCCGGCGACGACTCCATCTCCAGTGGGAGGGTGCAAAGCTCGCCACCGGGAGAGGCCACCGCCGTCCATCCATGGGTGGTACAATACTGTACCCCCTGGACTTGGACGCGGTTAGGAGGTCCGGCGTTCATCGAGGCAGTTATTGGAGGAGAAGGTGCAGCGATCGGTGGAGAAGGAGTAGGCGCGTCAGGGACCAGCGGGGCAGGCACGATCGGAGTGGCAGACATACGGCGGCGAGGGTAGTGGCGCCGGCCACCAACCCCCACCATGAGATCCCGGCGCGTCCTCCTTGTCGATCGTCGATGAAGATGGCAAAGACGGCGTGCGTGATCATGGCGAGGGATGCCGAGAATGGCATCGAGGATGGAAATAAAGGTAGACATACCTTCTGTTCTTCGCTTTTCCTGTAGATCAAAAAAGCGAGGTTTCTTCCTTCTTTCTTTCACTTCGAGATCTCCTTCGCGAGAGCGAAAGTTCTGATAACGTGTTGAAAGTGTATAAGATTGATTGAGCGAGAGGGATTGAGTGAGAGAGAGAATTGCACACAAGAATATAGAGAATGAATGAGCGGAATCTTTATTGATCAATGCGGTACAATATATAGATGGGAAAGTGGTGGCAACCGGAGACGCGATGGTTTGGGAACCATCGCGTCCGTTGCTAGAATCGCCGTGAGGCGAGAAGAGGTGTGGGGCACGACCAACCGTCGTGGATTGCTGCTCTATCCATATAGATGGATGAGATCACCCAAATATTTCATAACAACATATACGGAGTTTTTGTTTGCATGCTTTCCCAGCCCACAGTTAACATGAGAAAAGTATTAGTTTTTTAAAAAATAATATATCCAATCTAATGGTCTAAAATATTCCACAAATTTAAGTAGATTAAACAATGCTATGTGGCGATCTAGGAGCGTTTATAGGAGCGCCACGTGACGGCTTATGAGCGTTTGTAGAAAGTTTAATGGACTTTTAGTATATAATAGTATATAATAGATAGATATGATAATTTTATATGGTACTCTCTTCATTCCAATTTGATCATCATCTAATACTTTTGAGATTTTTCTGCAAATGATCATCACCTACCAAAATGTCTCTTTTTAATTTATGTAAAGAGTAGATTTGCATCGTGAAATATCCTGCGTGCATACAACATTTAAAACGTAAATTAATTTTTTGTTGGACACAAAACAATATTGCACCTTGATCGATAAGAATTAATTTCAAAATGATAGATATTTCGGTCTCATAGCTCTTGGTGTCATTTGCTTAAGGAATGATTAAATTGGGATAGATAAAGTATATAAAGTAAAGAAGCTGAAAAGCAGAGAGGCAGAAGGGGGAAACAAGCTAATTAACCAAACATTCTTTCTGGTGCTAAACGGCAGCTATACCATCTTCCCTTTTTTTTCTTATGAGCTCGACTAACCAATATGATATCGACTAACACACTGTATAAATCGACTAACCAATTGAGTTCACCGCTTGTAATCAGTAGGATCAGCATGTTCACCAGTTCAGCACGTAGCATCAGCAGGCAAATTATTTTGAGTGTTCCTAGACATTAACCGCATAAATCCCACGAACAGCAGTGAGCCTGCCTGCAGCTTTCCGCAACTGCAGCTCTCTTGGACGTCGCTGAGATTGTTCAAATGTGCGGTAGGAATGCCATCTTTATTGCTTACAACTGATGTGTAACGATGTTCCTTCCCCATGTCTCGCATTGCCCACCGTTAATTCTTATTCTTCTCCAATTAACCCGCTTGGACACTGAATATATATGTTT]


>consensus_2553#0 CACAGCCGCCGCCTTTCTCGTCGCCACCTCTACCACCGTCGTCGCCGCCGCCTTAGCCGC CGCCGCCGTTTTCGCCCCTGTTGGCCGCCGTTCCCCCGCCTTTCCGCCGCCGCCTCTGCC GCCTCCGCCTCAACCGCCGCCTCCTCCTTAGTCTCCTGCCGCAGCCATCCCTCCGTTCGC CGGCGATTTGCCGGCCGGGTTAGGCCGTCACCCCCCACTCCTCATTGGAGTCGGAGGCCG GCCGGACCCGGATGCAGTTCCCCATGACCCCATTTGCTAGGGTCCGGCTAGGAGATCCGT GGGGAACGACAATCGTGGCGCGGAGGACGGGACGGCGCGCAGCGGCGGCACCGGCGTATG GGCGCGACGAAGGAGGAGTGAAGAGCGGCGGTTCCCCCCTGCGCATGGCAAGTGTCCCGG TCCGGCCGTAGCCCGGCGGCTCGGGAGTGGGGAAGCGACTTCGGCGTGGTGGCAGTGGAG GTGGCTGAGCGGCTACCGGTGGCGTGGGAGTTGGGAATCAGCGTCGTCGTGGGGGCGGTG TCGGGGATGTCGGAGACAGCGACGAACGGAGCCGGCGACGACTCCATCTCCAGTGGGAGG GTGCAAAGCTCGCCACCGGGAGAGGCCACCGCCGTCCATCCATGGGTGGTACAATACTGT ACCCCCTGGACTTGGACGCGGTTAGGAGGTCCGGCGTTCATCGAGGCAGTTATTGGAGGA GAAGGTGCAGCGATCGGTGGAGAAGGAGTAGGCGCGTCAGGGACCAGCGGGGCAGGCACG ATCGGAGTGGCAGACATACGGCGGCGAGGGTAGTGGCGCCGGCCACCAACCCCCACCATG AGATCCCGGCGCGTCCTCCTTGTCGATCGTCGATGAAGATGGCAAAGACGGCGTGCGTGA TCATGGCGAGGGATGCCGAGAATGGCATCGAGGATGGAAATAAAGGTAGACATACCTTCT GTTCTTCGCTTTTCCTGTAGATCAAAAAAGCGAGGTTTCTTCCTTCTTTCTTTCACTTCG AGATCTCCTTCGCGAGAGCGAAAGTTCTGATAACGTGTTGAAAGTGTATAAGATTGATTG AGCGAGAGGGATTGAGTGAGAGAGAGAATTGCACACAAGAATATAGAGAATGAATGAGCG GAATCTTTATTGATCAATGCGGTACAATATATAGATGGGAAAGTGGTGGCAACCGGAGAC GCGATGGTTTGGGAACCATCGCGTCCGTTGCTAGAATCGCCGTGAGGCGAGAAGAGGTGT GGGGCACGACCAACCGTCGTGGATTGCTGCTCTATCCATATAGATGGATGAGATCACCCA AATATTTCATAACAACATATACGGAGTTTTTGTTTGCATGCTTTCCCAGCCCACAGTTAA CATGAGAAAAGTATTAGTTTTTTAAAAAATAATATATCCAATCTAATGGTCTAAAATATT CCACAAATTTAAGTAGATTAAACAATGCTATGTGGCGATCTAGGAGCGTTTATAGGAGCG CCACGTGACGGCTTATGAGCGTTTGTAGAAAGTTTAATGGACTTTTAGTATATAATAGTA TATAATAGATAGATATGATAATTTTATATGGTACTCTCTTCATTCCAATTTGATCATCAT CTAATACTTTTGAGATTTTTCTGCAAATGATCATCACCTACCAAAATGTCTCTTTTTAAT TTATGTAAAGAGTAGATTTGCATCGTGAAATATCCTGCGTGCATACAACATTTAAAACGT AAATTAATTTTTTGTTGGACACAAAACAATATTGCACCTTGATCGATAAGAATTAATTTC AAAATGATAGATATTTCGGTCTCATAGCTCTTGGTGTCATTTGCTTAAGGAATGATTAAA TTGGGATAGATAAAGTATATAAAGTAAAGAAGCTGAAAAGCAGAGAGGCAGAAGGGGGAA ACAAGCTAATTAACCAAACATTCTTTCTGGTGCTAAACGGCAGCTATACCATCTTCCCTT TTTTTTCTTATGAGCTCGACTAACCAATATGATATCGACTAACACACTGTATAAATCGAC TAACCAATTGAGTTCACCGCTTGTAATCAGTAGGATCAGCATGTTCACCAGTTCAGCACG TAGCATCAGCAGGCAAATTATTTTGAGTGTTCCTAGACATTAACCGCATAAATCCCACGA ACAGCAGTGAGCCTGCCTGCAGCTTTCCGCAACTGCAGCTCTCTTGGACGTCGCTGAGAT TGTTCAAATGTGCGGTAGGAATGCCATCTTTATTGCTTACAACTGATGTGTAACGATGTT CCTTCCCCATGTCTCGCATTGCCCACCGTTAATTCTTATTCTTCTCCAATTAACCCGCTT GGACACTGAATATATATGTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)