cluster # 2564

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Oryza sativa
cluster # 2564 cluster # 2564 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2564#0 length = 1116 sequences # 2

consensusID : consensus_2564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1116
fasta sequence

                              [TCTTTTTTTTAATAAAACCTATGGGACCCACATGTCAGTTTCTTACACACAATAATAAAAAGTTGTGAGGCCCACGTGGACCCCACCTCTCATCCTCACTACCCTTCTCTCTATCCCCCTCTCTCTATCATCTTTCTCCCTCTTCTCTCTCCCACCGGAGCGGCAGGCCGAGCGATGTCGGCGGCGGAGCGACGGGGAGGAGTGGCCGCGGCCGGAGTGGGGCGGGAAGGAGCGGGCCGGGCACCCCGACGAGGAGGCCGAAGAACAGGAGGTGCGCGGCCACGGCGACGGAGGCGGCCGCCGCGGCGCCGCACGCCCGGGAGACCTTCCTGATGGCCCTCACCACCTTCAGCTTCCTCGCCGCCTTCCCGTGGCTCGACTTGATGGCATGGAGAATGGACGAGTACCTGTCGTGGATCTGCCGGAAGCTACTCCGCGTCGCCACGTCGCTGAACGGGTTGCTCCGCATGGCAGCGAGCGGCGCTGCCGCTGTCATCGCCGCGGCGCCATCGGTAGCGGCGACGCTGTCGGAGATGGTGGCGAGGAAGCTGTCCATGGACAGGTAGTTGCTCTACGTGTTCTTGATGTTCGTCAGCAGCTGCTTACAGATCTCCGACGCCTCGTCGCTGGCGTCGAAGTAGCCCGCCATCGCCAGCTCGATCTCCGACGACGTCCTCCGGTGCATCATTCGCTGCAATTCCGCGGGAACGACGCCTTCAGTGCAGCGTGCTGATGTACTCCTCAATGCTCATTGATTCCATGGCTTGGTGTGATGGGCACATGAATTGCCCTGATTCCAAAACTCAATTTCTTCGAGTTTCTTGATCTTCTGGGACAAGCACTGTTTGCTTTCTTGGAGTTCCTTGATCTTTTTGGGATAAGCACTGTTGAATTGCCTCTCTTATCCAGATGTGGCTTTGGGAGGCAGTCGGCGCGGATGGGCGGCTCCGGCTGCGTCGGCGGGAGCAGCGACGACGCCGGCGGCGGCAGCTAGGCATCGGCTCCGAGGTGGTCACGCGGTGCCTCGCCGGGCTTCTTGGGTCGCTGCCCCATCCTACCCGCCGGCGAGAGGCTGTCCTGGGAGAGGCTCAAGAAGGCGATATGCGACGGCGAGGC]

[+] EMBL CB673223             [TCTTTTTTTTAATAAAACCTATGGGACCCACATGTCAGTTTCTTACACACAATAATAAAAAGTTGTGAGGCCCACGTGGACCCCACCTCTCATCCTCACTACCCTTCTCTCTATCCCCCTCTCTCTATCATCTTTCTCCCTCTTCTCTCTCCCACCGGAGCGGCAGGCCGAGCGATGTCGGCGGCGGAGCGACGGGGAGGAGTGGCCGCGGCCGGAGTGGGGCGGGAAGGAGCGGGCCGGGCACCCCGACGAGGAGGCCGAAGAACAGGAGGTGCGCGGCCACGGCGACGGAGGCGGCCGCCGCGGCGCCGCACGCCCGGGAGACCTTCCTGATGGCCCTCACCACCTTCAGCTTCCTCGCCGCCTTCCCGTGGCTCGACTTGATGGCATGGAGAATGGACGAGTACCTGTCGTGGATCTGCCGGAAGCTACTCCGCGTCGCCACGTCGCTGAACGGGTTGCTCCGCATGGCAGCGAGCGGCGCTGCCGCTGTCATCGCCGCGGCGCCATCGGTAGCGGCGACGCTGTCGGAGATGGTGGCGAGGAAGCTGTCCATGGACAGGTAGTTGCTCTACGTGTTCTTGATGTTCGTCAGCAGCTGCTTACAGATCTCCGACGCCTCGTCGCTGGCGTCGAAGTAGCCCGCCATCGCCAGCTCGATCTCCGACGACGTCCTCCGGTGCATCATTCGCTGCAATTCCGCGGGAACGACGCCTTCAGTGCAGCGTGCTGATGTACTCCTCAATGCTCATTGATTCCATGGCTTGGTGTGATGGGCACATGAATTG                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB673222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGCTGCAATTCCGCGGGAACGACGCCTTCAGTGCAGCGTGCTGATGTACTCCTCAATGCTCATTGATTCCATGGCTTGGTGTGATGGGCACATGAATTGCCCTGATTCCAAAACTCAATTTCTTCGAGTTTCTTGATCTTCTGGGACAAGCACTGTTTGCTTTCTTGGAGTTCCTTGATCTTTTTGGGATAAGCACTGTTGAATTGCCTCTCTTATCCAGATGTGGCTTTGGGAGGCAGTCGGCGCGGATGGGCGGCTCCGGCTGCGTCGGCGGGAGCAGCGACGACGCCGGCGGCGGCAGCTAGGCATCGGCTCCGAGGTGGTCACGCGGTGCCTCGCCGGGCTTCTTGGGTCGCTGCCCCATCCTACCCGCCGGCGAGAGGCTGTCCTGGGAGAGGCTCAAGAAGGCGATATGCGACGGCGAGGC]




>consensus_2564#0
TCTTTTTTTTAATAAAACCTATGGGACCCACATGTCAGTTTCTTACACACAATAATAAAA
AGTTGTGAGGCCCACGTGGACCCCACCTCTCATCCTCACTACCCTTCTCTCTATCCCCCT
CTCTCTATCATCTTTCTCCCTCTTCTCTCTCCCACCGGAGCGGCAGGCCGAGCGATGTCG
GCGGCGGAGCGACGGGGAGGAGTGGCCGCGGCCGGAGTGGGGCGGGAAGGAGCGGGCCGG
GCACCCCGACGAGGAGGCCGAAGAACAGGAGGTGCGCGGCCACGGCGACGGAGGCGGCCG
CCGCGGCGCCGCACGCCCGGGAGACCTTCCTGATGGCCCTCACCACCTTCAGCTTCCTCG
CCGCCTTCCCGTGGCTCGACTTGATGGCATGGAGAATGGACGAGTACCTGTCGTGGATCT
GCCGGAAGCTACTCCGCGTCGCCACGTCGCTGAACGGGTTGCTCCGCATGGCAGCGAGCG
GCGCTGCCGCTGTCATCGCCGCGGCGCCATCGGTAGCGGCGACGCTGTCGGAGATGGTGG
CGAGGAAGCTGTCCATGGACAGGTAGTTGCTCTACGTGTTCTTGATGTTCGTCAGCAGCT
GCTTACAGATCTCCGACGCCTCGTCGCTGGCGTCGAAGTAGCCCGCCATCGCCAGCTCGA
TCTCCGACGACGTCCTCCGGTGCATCATTCGCTGCAATTCCGCGGGAACGACGCCTTCAG
TGCAGCGTGCTGATGTACTCCTCAATGCTCATTGATTCCATGGCTTGGTGTGATGGGCAC
ATGAATTGCCCTGATTCCAAAACTCAATTTCTTCGAGTTTCTTGATCTTCTGGGACAAGC
ACTGTTTGCTTTCTTGGAGTTCCTTGATCTTTTTGGGATAAGCACTGTTGAATTGCCTCT
CTTATCCAGATGTGGCTTTGGGAGGCAGTCGGCGCGGATGGGCGGCTCCGGCTGCGTCGG
CGGGAGCAGCGACGACGCCGGCGGCGGCAGCTAGGCATCGGCTCCGAGGTGGTCACGCGG
TGCCTCGCCGGGCTTCTTGGGTCGCTGCCCCATCCTACCCGCCGGCGAGAGGCTGTCCTG
GGAGAGGCTCAAGAAGGCGATATGCGACGGCGAGGC

clustalw multiple alignements is not computed in this case