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Oryza sativa
cluster # 2566 cluster # 2566       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2566#0 length = 3453 sequences # 1  
 consensus_2566#1 length = 1179 sequences # 1  
consensusID : consensus_2566#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3453
fasta sequence 
                              [GTAATATGAGGAAGGAAACAAATGCTGGCTACATGGTTACAGATGGCCTTGTCATTGCTGCTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGAGCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGAGGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGTGAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAGGTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACTATGTGAGTATTTTCTGGTGATGAAAAGTGGACAACCCCTTATCAATATTACTCTGCTAGTAAACAGTGTTTTTATCGTTAACAAGTGAAGGTGGTAATAGTGGATCTTTAGAAACAGTATTGGTGGCTGGTTTTTGAGTGTAGCCATCATCATAATTGTTTTTATAAATTACCTAGGTAGCATGGTATTTCAAATTAGTTATAAGTGGTTGTCAGGAGATTTCTAACTTCTTCGTGCATGTCTTGCTTAACTGAGAGTGGAATACCCACTTTTAACCCAGCTTGGGGGCATATTTTCTATTTTGTATGGATTGTCTAGTGAGCATGCATGGTCTGGACCTGCATGAACTGGATTGCACAATAATAACTACATTAGATAAATCATGAAAAGTAATATATCTCACAGGCCACAGCAGTCAATGAAAACTGTAAACTTCAGGACCTTAAGGCACTCTGCAGTAGTATCTGCAATAGGCCAGCCATTTTCTCCATTTGTTAAGGTCCATGAACCTTTTGATCTTTCACGGTAAAAACTGCTGTAACTTGGACAATTCTTAGTGACCTTCGTGAAAATGAACAATAATATCAAACTTTAGCAATTACATAGTGTATGCCTAAATTAATGTACATATGGAATTGAACAAACCTGTGAATTCTTTATAAAATCATGAGCTTTTCTAAGAGTTGCGGCAAACTCTTTGGTAAGGCCTGACGAGCAATAGGCCTGGACTATAAGTGCAGTTTCCCAGCACTGGCAACCACCATATACCTATTATTGAATAGAAAAAGCATAAACAATCATCACACATTATGAAAATTAAAGTATTTATAAAACAAACAACAAATAATACTAATAGCTGCATATATGTGTAAGTGCTTTCTAGGACATTTACCGGTAAAGCCATACCACAGTTACAGATACTGGGATAGTAATTCTTTACCAATAGACAGCTTGATGGGATATTTACCGGTAGACTAAGTGGTATGGACAGACAACTGCCTCCTATCCGATGTTGTGGTATAGTATTGTTGAGGTGGATAAGATAAGGAGGTGCTCTGGTAAAAAATATAATGGAGGAGGGCATTGTGCTCGGGCCGGTTTTTTTAATAGGTGCCAGTTTTCGGGACCTATAGTATAGGTACCGGTTTTTTCTCTAGAACCGACACCTATTGGTTTTTCCTCTAGAACTGACACCTATAGTGTTTAAAGGTATCGGTTCTATATTTTTTCATTACATTACATGGAGGTGGAAAAAGGTTCATCGGTGCCGGTTTTAAATAAATCGGCACCTATGAGCCGACACCTGTGAAGGGTTTTGTAGTAGTGTTGTCATGCCAAAATTTATAATATTAATGGAGGTATACGAAAATGATATATCTAAGTTGGAATATCTATGATTTATGCTACAAAACTAGATCATTCATCAAAGTCATATTTTAATTTATTTTAAAGTTGTACTATATCCTTTTTTAATATATGAAGCCGTTGACTTTTGGAGTACCGTGTGACCATTCAACAAAGTCATACTTAAAGTTTCTTTAATCACAAAATATGTCGCAACAAAATAAATAAAATTTATATCTCTATTTTTTAATTGGACAAATGTTCAAATGCAGGATCATCTATTAGAAATTGGTGGGAGTATAATGTTGATTTTAAACAGGCCCAAAACGCAGGCCCATAACAATGCCATTTCCATTCGATAGGCTTGTTTCCTGCCTGCCATCCTTCCCTCAACTCATCCTCCTCTGTTCCTGTAACACATGTCTCTTTCTCCCTTTTTCTGTATGTTACATTATATAACATCTCATCTATGACTGTTATAAGTGTAGTTCTTTTATTGCTCAGTGATATTTGTGTTTGTTATGGAAAAATTGAACTATATATGAAGTAATAAGTTAAACGATAAGATAGTTTTGTATTGTGCAAATTCAAAAAAGTTGTAAATGATAAGTTATCTAATATAAAAAAAATGCATAAATCATACCTTTGACTTCATTCCATCTTCTGCTAGCCATAAGAAATCGTGAATCCTTGGAAGATGTTGCCTGAATGCATAAGAATTTGGATTTTCTGTCCAGCAACATATCATATTTAATACCTAATTATAAGATAATATAAGTGGAAAGTACCGAGAACAATGAGTATTTCAATTGTCAAGATGGTTTCCCGTAAAAAAAAGAACCTCCAACAGGTAATAGTTGGCATGTGTTGACCATGTGCATTATGATATGGCTAGAACTTGGATTATAATTCTTGTCTTCCATGCATAACTTAGATCGGTTTACTTCACTATATGACCCATGCGATTCAACCATGACACCTCCATGCATGTTATCCTTTTATATGAAAATACAGTAATAAAGGTGCAAGTACATATATATATTCACACATATGCTGATTAGCGTTGGGTACAATGCAGATCGTGGATACTAGTAGGTTTCTGATAGTACAAGAGCATAAACACATCAATGCATTGGTCCATGTGCATGTGGCCCCATGGAAAGCCTAAGGAAGGTCATGTGTTCAACTATTCTGAAAGAAAAATAGAAGAGTGTTGAGCTTGGAAATATTGTTGCATATAGTTCGTCTAGTTAGGAAACATAGATACACCACCCATGTCCTAGCAGTTGCTACTGCGCATGTACCACAGCCACCTTCGGCTGACATCATCCATCACAGCTACCCCTGGCTGTTGTTTTCGTGTGTATGTTGCTGCTCTTCTATTTCTGTAACACCCCAACCTCCAAACCTTTAGTAGCCTAGCTCTACGCGTTGAGCAGGCCCACGCTCACGTAGCACCCCACTTACACTTTTGTTCTCTACTCGTGTAAACAGGTTAAACTAGAGGTATTATGGTTGGAGTGAACTGGGTATATAAGCTGGCCCAAACCTATCTAGACTCTTCATGTAGGACTACTCTCAAACGAACACTTTGGTCTAGCGTGTCTAAATTGGAAAAAGAACACACCTGGGCCAAAACAAACTAAATGGTTGTTCGATCTGTACATTGCTTCTTCTACTACTAGGTGATTCCCCGTGCTTTGCTGTGGGAATTACTAAGCAATCCTCAATATATTTTTTCAACAATCA]

[+] EMBL AK070927             [GTAATATGAGGAAGGAAACAAATGCTGGCTACATGGTTACAGATGGCCTTGTCATTGCTGCTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGAGCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGAGGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGTGAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAGGTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACTATGTGAGTATTTTCTGGTGATGAAAAGTGGACAACCCCTTATCAATATTACTCTGCTAGTAAACAGTGTTTTTATCGTTAACAAGTGAAGGTGGTAATAGTGGATCTTTAGAAACAGTATTGGTGGCTGGTTTTTGAGTGTAGCCATCATCATAATTGTTTTTATAAATTACCTAGGTAGCATGGTATTTCAAATTAGTTATAAGTGGTTGTCAGGAGATTTCTAACTTCTTCGTGCATGTCTTGCTTAACTGAGAGTGGAATACCCACTTTTAACCCAGCTTGGGGGCATATTTTCTATTTTGTATGGATTGTCTAGTGAGCATGCATGGTCTGGACCTGCATGAACTGGATTGCACAATAATAACTACATTAGATAAATCATGAAAAGTAATATATCTCACAGGCCACAGCAGTCAATGAAAACTGTAAACTTCAGGACCTTAAGGCACTCTGCAGTAGTATCTGCAATAGGCCAGCCATTTTCTCCATTTGTTAAGGTCCATGAACCTTTTGATCTTTCACGGTAAAAACTGCTGTAACTTGGACAATTCTTAGTGACCTTCGTGAAAATGAACAATAATATCAAACTTTAGCAATTACATAGTGTATGCCTAAATTAATGTACATATGGAATTGAACAAACCTGTGAATTCTTTATAAAATCATGAGCTTTTCTAAGAGTTGCGGCAAACTCTTTGGTAAGGCCTGACGAGCAATAGGCCTGGACTATAAGTGCAGTTTCCCAGCACTGGCAACCACCATATACCTATTATTGAATAGAAAAAGCATAAACAATCATCACACATTATGAAAATTAAAGTATTTATAAAACAAACAACAAATAATACTAATAGCTGCATATATGTGTAAGTGCTTTCTAGGACATTTACCGGTAAAGCCATACCACAGTTACAGATACTGGGATAGTAATTCTTTACCAATAGACAGCTTGATGGGATATTTACCGGTAGACTAAGTGGTATGGACAGACAACTGCCTCCTATCCGATGTTGTGGTATAGTATTGTTGAGGTGGATAAGATAAGGAGGTGCTCTGGTAAAAAATATAATGGAGGAGGGCATTGTGCTCGGGCCGGTTTTTTTAATAGGTGCCAGTTTTCGGGACCTATAGTATAGGTACCGGTTTTTTCTCTAGAACCGACACCTATTGGTTTTTCCTCTAGAACTGACACCTATAGTGTTTAAAGGTATCGGTTCTATATTTTTTCATTACATTACATGGAGGTGGAAAAAGGTTCATCGGTGCCGGTTTTAAATAAATCGGCACCTATGAGCCGACACCTGTGAAGGGTTTTGTAGTAGTGTTGTCATGCCAAAATTTATAATATTAATGGAGGTATACGAAAATGATATATCTAAGTTGGAATATCTATGATTTATGCTACAAAACTAGATCATTCATCAAAGTCATATTTTAATTTATTTTAAAGTTGTACTATATCCTTTTTTAATATATGAAGCCGTTGACTTTTGGAGTACCGTGTGACCATTCAACAAAGTCATACTTAAAGTTTCTTTAATCACAAAATATGTCGCAACAAAATAAATAAAATTTATATCTCTATTTTTTAATTGGACAAATGTTCAAATGCAGGATCATCTATTAGAAATTGGTGGGAGTATAATGTTGATTTTAAACAGGCCCAAAACGCAGGCCCATAACAATGCCATTTCCATTCGATAGGCTTGTTTCCTGCCTGCCATCCTTCCCTCAACTCATCCTCCTCTGTTCCTGTAACACATGTCTCTTTCTCCCTTTTTCTGTATGTTACATTATATAACATCTCATCTATGACTGTTATAAGTGTAGTTCTTTTATTGCTCAGTGATATTTGTGTTTGTTATGGAAAAATTGAACTATATATGAAGTAATAAGTTAAACGATAAGATAGTTTTGTATTGTGCAAATTCAAAAAAGTTGTAAATGATAAGTTATCTAATATAAAAAAAATGCATAAATCATACCTTTGACTTCATTCCATCTTCTGCTAGCCATAAGAAATCGTGAATCCTTGGAAGATGTTGCCTGAATGCATAAGAATTTGGATTTTCTGTCCAGCAACATATCATATTTAATACCTAATTATAAGATAATATAAGTGGAAAGTACCGAGAACAATGAGTATTTCAATTGTCAAGATGGTTTCCCGTAAAAAAAAGAACCTCCAACAGGTAATAGTTGGCATGTGTTGACCATGTGCATTATGATATGGCTAGAACTTGGATTATAATTCTTGTCTTCCATGCATAACTTAGATCGGTTTACTTCACTATATGACCCATGCGATTCAACCATGACACCTCCATGCATGTTATCCTTTTATATGAAAATACAGTAATAAAGGTGCAAGTACATATATATATTCACACATATGCTGATTAGCGTTGGGTACAATGCAGATCGTGGATACTAGTAGGTTTCTGATAGTACAAGAGCATAAACACATCAATGCATTGGTCCATGTGCATGTGGCCCCATGGAAAGCCTAAGGAAGGTCATGTGTTCAACTATTCTGAAAGAAAAATAGAAGAGTGTTGAGCTTGGAAATATTGTTGCATATAGTTCGTCTAGTTAGGAAACATAGATACACCACCCATGTCCTAGCAGTTGCTACTGCGCATGTACCACAGCCACCTTCGGCTGACATCATCCATCACAGCTACCCCTGGCTGTTGTTTTCGTGTGTATGTTGCTGCTCTTCTATTTCTGTAACACCCCAACCTCCAAACCTTTAGTAGCCTAGCTCTACGCGTTGAGCAGGCCCACGCTCACGTAGCACCCCACTTACACTTTTGTTCTCTACTCGTGTAAACAGGTTAAACTAGAGGTATTATGGTTGGAGTGAACTGGGTATATAAGCTGGCCCAAACCTATCTAGACTCTTCATGTAGGACTACTCTCAAACGAACACTTTGGTCTAGCGTGTCTAAATTGGAAAAAGAACACACCTGGGCCAAAACAAACTAAATGGTTGTTCGATCTGTACATTGCTTCTTCTACTACTAGGTGATTCCCCGTGCTTTGCTGTGGGAATTACTAAGCAATCCTCAATATATTTTTTCAACAATCA]




>consensus_2566#0
GTAATATGAGGAAGGAAACAAATGCTGGCTACATGGTTACAGATGGCCTTGTCATTGCTG
CTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGA
GCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGA
GGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGT
GAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAG
GTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACT
ATGTGAGTATTTTCTGGTGATGAAAAGTGGACAACCCCTTATCAATATTACTCTGCTAGT
AAACAGTGTTTTTATCGTTAACAAGTGAAGGTGGTAATAGTGGATCTTTAGAAACAGTAT
TGGTGGCTGGTTTTTGAGTGTAGCCATCATCATAATTGTTTTTATAAATTACCTAGGTAG
CATGGTATTTCAAATTAGTTATAAGTGGTTGTCAGGAGATTTCTAACTTCTTCGTGCATG
TCTTGCTTAACTGAGAGTGGAATACCCACTTTTAACCCAGCTTGGGGGCATATTTTCTAT
TTTGTATGGATTGTCTAGTGAGCATGCATGGTCTGGACCTGCATGAACTGGATTGCACAA
TAATAACTACATTAGATAAATCATGAAAAGTAATATATCTCACAGGCCACAGCAGTCAAT
GAAAACTGTAAACTTCAGGACCTTAAGGCACTCTGCAGTAGTATCTGCAATAGGCCAGCC
ATTTTCTCCATTTGTTAAGGTCCATGAACCTTTTGATCTTTCACGGTAAAAACTGCTGTA
ACTTGGACAATTCTTAGTGACCTTCGTGAAAATGAACAATAATATCAAACTTTAGCAATT
ACATAGTGTATGCCTAAATTAATGTACATATGGAATTGAACAAACCTGTGAATTCTTTAT
AAAATCATGAGCTTTTCTAAGAGTTGCGGCAAACTCTTTGGTAAGGCCTGACGAGCAATA
GGCCTGGACTATAAGTGCAGTTTCCCAGCACTGGCAACCACCATATACCTATTATTGAAT
AGAAAAAGCATAAACAATCATCACACATTATGAAAATTAAAGTATTTATAAAACAAACAA
CAAATAATACTAATAGCTGCATATATGTGTAAGTGCTTTCTAGGACATTTACCGGTAAAG
CCATACCACAGTTACAGATACTGGGATAGTAATTCTTTACCAATAGACAGCTTGATGGGA
TATTTACCGGTAGACTAAGTGGTATGGACAGACAACTGCCTCCTATCCGATGTTGTGGTA
TAGTATTGTTGAGGTGGATAAGATAAGGAGGTGCTCTGGTAAAAAATATAATGGAGGAGG
GCATTGTGCTCGGGCCGGTTTTTTTAATAGGTGCCAGTTTTCGGGACCTATAGTATAGGT
ACCGGTTTTTTCTCTAGAACCGACACCTATTGGTTTTTCCTCTAGAACTGACACCTATAG
TGTTTAAAGGTATCGGTTCTATATTTTTTCATTACATTACATGGAGGTGGAAAAAGGTTC
ATCGGTGCCGGTTTTAAATAAATCGGCACCTATGAGCCGACACCTGTGAAGGGTTTTGTA
GTAGTGTTGTCATGCCAAAATTTATAATATTAATGGAGGTATACGAAAATGATATATCTA
AGTTGGAATATCTATGATTTATGCTACAAAACTAGATCATTCATCAAAGTCATATTTTAA
TTTATTTTAAAGTTGTACTATATCCTTTTTTAATATATGAAGCCGTTGACTTTTGGAGTA
CCGTGTGACCATTCAACAAAGTCATACTTAAAGTTTCTTTAATCACAAAATATGTCGCAA
CAAAATAAATAAAATTTATATCTCTATTTTTTAATTGGACAAATGTTCAAATGCAGGATC
ATCTATTAGAAATTGGTGGGAGTATAATGTTGATTTTAAACAGGCCCAAAACGCAGGCCC
ATAACAATGCCATTTCCATTCGATAGGCTTGTTTCCTGCCTGCCATCCTTCCCTCAACTC
ATCCTCCTCTGTTCCTGTAACACATGTCTCTTTCTCCCTTTTTCTGTATGTTACATTATA
TAACATCTCATCTATGACTGTTATAAGTGTAGTTCTTTTATTGCTCAGTGATATTTGTGT
TTGTTATGGAAAAATTGAACTATATATGAAGTAATAAGTTAAACGATAAGATAGTTTTGT
ATTGTGCAAATTCAAAAAAGTTGTAAATGATAAGTTATCTAATATAAAAAAAATGCATAA
ATCATACCTTTGACTTCATTCCATCTTCTGCTAGCCATAAGAAATCGTGAATCCTTGGAA
GATGTTGCCTGAATGCATAAGAATTTGGATTTTCTGTCCAGCAACATATCATATTTAATA
CCTAATTATAAGATAATATAAGTGGAAAGTACCGAGAACAATGAGTATTTCAATTGTCAA
GATGGTTTCCCGTAAAAAAAAGAACCTCCAACAGGTAATAGTTGGCATGTGTTGACCATG
TGCATTATGATATGGCTAGAACTTGGATTATAATTCTTGTCTTCCATGCATAACTTAGAT
CGGTTTACTTCACTATATGACCCATGCGATTCAACCATGACACCTCCATGCATGTTATCC
TTTTATATGAAAATACAGTAATAAAGGTGCAAGTACATATATATATTCACACATATGCTG
ATTAGCGTTGGGTACAATGCAGATCGTGGATACTAGTAGGTTTCTGATAGTACAAGAGCA
TAAACACATCAATGCATTGGTCCATGTGCATGTGGCCCCATGGAAAGCCTAAGGAAGGTC
ATGTGTTCAACTATTCTGAAAGAAAAATAGAAGAGTGTTGAGCTTGGAAATATTGTTGCA
TATAGTTCGTCTAGTTAGGAAACATAGATACACCACCCATGTCCTAGCAGTTGCTACTGC
GCATGTACCACAGCCACCTTCGGCTGACATCATCCATCACAGCTACCCCTGGCTGTTGTT
TTCGTGTGTATGTTGCTGCTCTTCTATTTCTGTAACACCCCAACCTCCAAACCTTTAGTA
GCCTAGCTCTACGCGTTGAGCAGGCCCACGCTCACGTAGCACCCCACTTACACTTTTGTT
CTCTACTCGTGTAAACAGGTTAAACTAGAGGTATTATGGTTGGAGTGAACTGGGTATATA
AGCTGGCCCAAACCTATCTAGACTCTTCATGTAGGACTACTCTCAAACGAACACTTTGGT
CTAGCGTGTCTAAATTGGAAAAAGAACACACCTGGGCCAAAACAAACTAAATGGTTGTTC
GATCTGTACATTGCTTCTTCTACTACTAGGTGATTCCCCGTGCTTTGCTGTGGGAATTAC
TAAGCAATCCTCAATATATTTTTTCAACAATCA

consensusID : consensus_2566#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1179
fasta sequence 
                              [AGATGGCCTTGTCATTGCTGCTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGAGCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGAGGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGTGAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAGGTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACTATCCAGAATCGAAACCCACATGGCGAGGTCAATCGCACATCAAGGTTGATACTGACTACAAGAATGGGCTAGTGCGATTTTGTTGACTAAAATTCATTTGCTGAGTTTGCTGCAGATTTTGACATAGTCCAGAAAAGAAGATGTGGAGGCAGTGACGAGATAACCACAATAGGCTATAGGGCCATAAGTCCATCCTTAAGTGCCTATAGACTGAGGATGTCGGCAGGTTTGGTCACCCTTGGAGAGGCGGCCAATCCATTTGCTCCCGTCATGTTCAAGATCTACCACCTAGCCATTGTGATTGTCCTCTGATGTGCAAAGCCTCTAGCGGGAGCAACAAGTATTTCGCACTCTATGCCGTCCACCACATCATCACCACCTTCTCATGGTCCCCCTATCTACCTTAATCTGGTGAGCTCAAGCCATGAGATACAAAAACCTAGCTGGTTCTAGAGACCACCTCCTCTGGTTCTAGCGATGGCTAATGTTGTTGTAATAGGCAACACGATGATGAGAACATTTTCTCATTTGTATTTTGTGTTTTTAATCGCAATTGTAAATGTATACAATGCTTGTTAAAATAGAGCACTTGGTCATGCCTATGAGATGAGGTGTCGTCTAGACCTACATGAAAAATTGTAGTTGTGTACAAACCATGAGACATTGTTATCTAGGTGATTCCCAGATGGGCAGAGCTAGGGTCTAGAGTTACGAGCTTCTACAGGGTATGTTTGGTTTAAGATTTACCTTGGTTTGGATGTCATTTCTCATAGACTTGCTGCCTTCTTGCTCTTTCATTCAATTCATAGTTGATTTCAATCCATGATGTCTCATTACAACTGATTCAATGTATGATGGG]

[+] EMBL AK072926             [AGATGGCCTTGTCATTGCTGCTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGAGCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGAGGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGTGAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAGGTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACTATCCAGAATCGAAACCCACATGGCGAGGTCAATCGCACATCAAGGTTGATACTGACTACAAGAATGGGCTAGTGCGATTTTGTTGACTAAAATTCATTTGCTGAGTTTGCTGCAGATTTTGACATAGTCCAGAAAAGAAGATGTGGAGGCAGTGACGAGATAACCACAATAGGCTATAGGGCCATAAGTCCATCCTTAAGTGCCTATAGACTGAGGATGTCGGCAGGTTTGGTCACCCTTGGAGAGGCGGCCAATCCATTTGCTCCCGTCATGTTCAAGATCTACCACCTAGCCATTGTGATTGTCCTCTGATGTGCAAAGCCTCTAGCGGGAGCAACAAGTATTTCGCACTCTATGCCGTCCACCACATCATCACCACCTTCTCATGGTCCCCCTATCTACCTTAATCTGGTGAGCTCAAGCCATGAGATACAAAAACCTAGCTGGTTCTAGAGACCACCTCCTCTGGTTCTAGCGATGGCTAATGTTGTTGTAATAGGCAACACGATGATGAGAACATTTTCTCATTTGTATTTTGTGTTTTTAATCGCAATTGTAAATGTATACAATGCTTGTTAAAATAGAGCACTTGGTCATGCCTATGAGATGAGGTGTCGTCTAGACCTACATGAAAAATTGTAGTTGTGTACAAACCATGAGACATTGTTATCTAGGTGATTCCCAGATGGGCAGAGCTAGGGTCTAGAGTTACGAGCTTCTACAGGGTATGTTTGGTTTAAGATTTACCTTGGTTTGGATGTCATTTCTCATAGACTTGCTGCCTTCTTGCTCTTTCATTCAATTCATAGTTGATTTCAATCCATGATGTCTCATTACAACTGATTCAATGTATGATGGG]




>consensus_2566#1
AGATGGCCTTGTCATTGCTGCTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCA
AAAGAATAGGGACCGAGTGAGCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGC
AAGAAGGTAAGCACTGGCGAGGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGA
TGGCTACTCATTGCAGGGGTGAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAG
GAAAAGGAAAAGAATATAAGGTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGC
CATGCAAAAGAGGATAAACTATCCAGAATCGAAACCCACATGGCGAGGTCAATCGCACAT
CAAGGTTGATACTGACTACAAGAATGGGCTAGTGCGATTTTGTTGACTAAAATTCATTTG
CTGAGTTTGCTGCAGATTTTGACATAGTCCAGAAAAGAAGATGTGGAGGCAGTGACGAGA
TAACCACAATAGGCTATAGGGCCATAAGTCCATCCTTAAGTGCCTATAGACTGAGGATGT
CGGCAGGTTTGGTCACCCTTGGAGAGGCGGCCAATCCATTTGCTCCCGTCATGTTCAAGA
TCTACCACCTAGCCATTGTGATTGTCCTCTGATGTGCAAAGCCTCTAGCGGGAGCAACAA
GTATTTCGCACTCTATGCCGTCCACCACATCATCACCACCTTCTCATGGTCCCCCTATCT
ACCTTAATCTGGTGAGCTCAAGCCATGAGATACAAAAACCTAGCTGGTTCTAGAGACCAC
CTCCTCTGGTTCTAGCGATGGCTAATGTTGTTGTAATAGGCAACACGATGATGAGAACAT
TTTCTCATTTGTATTTTGTGTTTTTAATCGCAATTGTAAATGTATACAATGCTTGTTAAA
ATAGAGCACTTGGTCATGCCTATGAGATGAGGTGTCGTCTAGACCTACATGAAAAATTGT
AGTTGTGTACAAACCATGAGACATTGTTATCTAGGTGATTCCCAGATGGGCAGAGCTAGG
GTCTAGAGTTACGAGCTTCTACAGGGTATGTTTGGTTTAAGATTTACCTTGGTTTGGATG
TCATTTCTCATAGACTTGCTGCCTTCTTGCTCTTTCATTCAATTCATAGTTGATTTCAAT
CCATGATGTCTCATTACAACTGATTCAATGTATGATGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2566#0      GTAATATGAGGAAGGAAACAAATGCTGGCTACATGGTTACAGATGGCCTTGTCATTGCTG 60
consensus_2566#1      ----------------------------------------AGATGGCCTTGTCATTGCTG 20
                                                              ********************

consensus_2566#0      CTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGA 120
consensus_2566#1      CTGGGAGCAGCTGGGCGACGAACTCTATGGAAGGTTGGCAAAAGAATAGGGACCGAGTGA 80
                      ************************************************************

consensus_2566#0      GCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGA 180
consensus_2566#1      GCAGCTTGGATGATGAGACATTGAGCCGTCAAGGAGTAGCAAGAAGGTAAGCACTGGCGA 140
                      ************************************************************

consensus_2566#0      GGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGT 240
consensus_2566#1      GGTAGTAAGGATCCACGCGTGGAGGCAGGAAGACAGGAGATGGCTACTCATTGCAGGGGT 200
                      ************************************************************

consensus_2566#0      GAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAG 300
consensus_2566#1      GAGTTTGGGCATGTCATCTGGAAGCACACATCGTGGGGAGGAAAAGGAAAAGAATATAAG 260
                      ************************************************************

consensus_2566#0      GTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACT 360
consensus_2566#1      GTACCCATGCTGCACGAATGTTGGCTCAATCTGGGTCGGCCATGCAAAAGAGGATAAACT 320
                      ************************************************************

consensus_2566#0      ATGTGAGTATTTTCTGGTGATGAAAAGTGGACAACCCCTTATCAATATTACTCTGCTAGT 420
consensus_2566#1      ATCC-------------------AGAATCGAAACCCACATGGCGAGGTCAATCGCACATC 361
                      **                     * * * ** * ** * *  * *  * * **    *  

consensus_2566#0      AAACAGTGTTTTTATCGTTAACAAGTGAAGGTGGTAATAGTGGATCTTTAGAAACAGTAT 480
consensus_2566#1      AAG----GTTGATACTGACTACAAG--AATGGGCTAGT-GCGATTTTGTTGACTAAAATT 414
                      **     ***  **  *   *****  ** * * ** * * *  * * * **   *   *

consensus_2566#0      TGGTGGCTGGTTTTTGAGTGTAGCCATCATCATAATTGTTTTTATAAATTACCTAGGTAG 540
consensus_2566#1      CATTTGCTGAGTTT--GCTGCAGATTTTGACATAGTCCAGAAAAGAAGATGTGGAGGCAG 472
                         * ****  ***    ** **   *   **** *       * **  *    *** **

consensus_2566#0      CATGGTATTTCAAATTAGTTATAAGTGGTTGTCAGGAGATTTCTAACTTCTTCGTGCATG 600
consensus_2566#1      TGA-------CGAGATAACCACAATAGGCTATAGGGCCAT----AAGTCCATCCT-TAAG 520
                                * *  **   * **  ** * *  **  **    ** * * ** *  * *

consensus_2566#0      TCTTGCTTAACTGAGAGTGGAATACCCACTTTTAACCCAGCTTGGGGGCATATTTTCTAT 660
consensus_2566#1      TGCCTATAGACTGAGGATG---TCGGCAGGTTTGGTCACCCTTGGAGAGGCGG---CCAA 574
                      *     *  ******  **   *   **  ***   *   ***** *         * * 

consensus_2566#0      TTTGTATGGATTGTCTAGTGAGCATGCATGGTCTGGACCTGCATGAACTGGATTGCACAA 720
consensus_2566#1      TCCATTTGC----TCCCGTCA-TGTTCAAGATCTACCACCTAGCCATTGTGATTGTCCTC 629
                      *   * **     **  ** *   * ** * ***    *      *    *****  *  

consensus_2566#0      TAATAACTACATTAGATAAATCATGAAAAGTAATATATCTCACAGGCCACAGCAGTCAAT 780
consensus_2566#1      TGATG--TGCAAAGCCTCTAGCGGGAGCAACAA-GTATTTCGCACTCTAT-GCCGTCCAC 685
                      * **   * **     *  * *  **  *  **  *** ** **  * *  ** *** * 

consensus_2566#0      GAAAACTGTAAACTTCAGGACCTTAAGGCACTCTGCAGTAGTATCTGCAATAGGCCAGCC 840
consensus_2566#1      CACA----TCATCACCACCTTCTCATGGTCCCCC-------TATCTACCTTAATCTGGTG 734
                       * *    * * *  **    ** * **  * *        ***** *  **  *  *  

consensus_2566#0      ATTTTCTCCATTTGTTAAGGTCCATGAACCTTTTGATCTTTCACGGTAAAAACTGCTGTA 900
consensus_2566#1      AGCT----CAAGCCATGAGATACAAAAACCTA--GCTGGTTCTAGAGACCACCTCCTCTG 788
                      *  *    **     * ** * **  *****   * *  ***  *  *  * ** ** * 

consensus_2566#0      ACTTGGACAATTCTTAGTGACCTTCGTGAAAATGA-ACAATAATATCAA-ACTTTAGCAA 958
consensus_2566#1      GTTCTAGCGATGGCTAATGTTGTTGTAATAGGCAACACGATGATGAGAACATTTTCTCAT 848
                        *    * **   ** **   **     *    * ** ** **   ** * ***  ** 

consensus_2566#0      TTACATAGTGTATGCCTAAATTAATGTACATATGGAATTGAACAA-ACCTGTGAATTCTT 1017
consensus_2566#1      TTGTATTTTGTGTTTTTAATC----GCAATTGTAAATGTATACAATGCTTGTTAA----- 899
                      **  **  *** *   ***      * *  * *  *  *  ****  * *** **     

consensus_2566#0      TATAAAAT-CATGAGCTTTTCTAAGAGTTGCGGCAAACTCTTTGGTAAGGCCTGACGAGC 1076
consensus_2566#1      AATAGAGCACTTGGTCATGCCTATGAGATGAGGTG--TCGTCTAGACCTACATGAAAAAT 957
                       *** *   * **  * *  *** *** ** **       * * *     * ***  *  

consensus_2566#0      AATAGGCCTGGACTATAAGTGCAGTTTCCCAGCACTGGCAACCACCATATACCTATTATT 1136
consensus_2566#1      TGTAGTTGTGTACAAACCATGAGACATTGTTATCTAGGTGATTCCCAGATGGGCAGAGCT 1017
                        ***   ** ** *    **     *         **  *   *** **    *    *

consensus_2566#0      GAATAGAAAAAGCATAAACAATCATCACACATTATGAAAATTAAAGTATTTATAAAACAA 1196
consensus_2566#1      AGGGTCTAGAGTTACGAGC---TTCTACAGGGTATGTTTGGTTTAAGATTTAC----CTT 1070
                             * *   *  * *       ***   ****     *  *  *****     *  

consensus_2566#0      ACAACAAATAATACTAATAGCTGCATATATGTGTAAGTGCTTTCTAGGACATTTACCGGT 1256
consensus_2566#1      GGTTTGGATGTCATTTCT-----CATAGACTTGC---TGCCTTCTTGCTCTTTCAT---T 1119
                             **   * *  *     **** *  **    *** **** *  * ** *    *

consensus_2566#0      AAAGCCATACCACAGTTACAGATACTGGGATAGTAATTCTTTACCAATAGACAGCTTGAT 1316
consensus_2566#1      CAATTCATAGT-TGATTTCAAT--CCATGATGTCTCATTACAACTGATTCAATGTATGAT 1176
                       **  ****      ** **    *   ***      *    **  **  *  *  ****

consensus_2566#0      GGGATATTTACCGGTAGACTAAGTGGTATGGACAGACAACTGCCTCCTATCCGATGTTGT 1376
consensus_2566#1      GGG--------------------------------------------------------- 1179
                      ***                                                         

consensus_2566#0      GGTATAGTATTGTTGAGGTGGATAAGATAAGGAGGTGCTCTGGTAAAAAATATAATGGAG 1436
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GAGGGCATTGTGCTCGGGCCGGTTTTTTTAATAGGTGCCAGTTTTCGGGACCTATAGTAT 1496
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AGGTACCGGTTTTTTCTCTAGAACCGACACCTATTGGTTTTTCCTCTAGAACTGACACCT 1556
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      ATAGTGTTTAAAGGTATCGGTTCTATATTTTTTCATTACATTACATGGAGGTGGAAAAAG 1616
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GTTCATCGGTGCCGGTTTTAAATAAATCGGCACCTATGAGCCGACACCTGTGAAGGGTTT 1676
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TGTAGTAGTGTTGTCATGCCAAAATTTATAATATTAATGGAGGTATACGAAAATGATATA 1736
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TCTAAGTTGGAATATCTATGATTTATGCTACAAAACTAGATCATTCATCAAAGTCATATT 1796
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TTAATTTATTTTAAAGTTGTACTATATCCTTTTTTAATATATGAAGCCGTTGACTTTTGG 1856
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AGTACCGTGTGACCATTCAACAAAGTCATACTTAAAGTTTCTTTAATCACAAAATATGTC 1916
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GCAACAAAATAAATAAAATTTATATCTCTATTTTTTAATTGGACAAATGTTCAAATGCAG 1976
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GATCATCTATTAGAAATTGGTGGGAGTATAATGTTGATTTTAAACAGGCCCAAAACGCAG 2036
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GCCCATAACAATGCCATTTCCATTCGATAGGCTTGTTTCCTGCCTGCCATCCTTCCCTCA 2096
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      ACTCATCCTCCTCTGTTCCTGTAACACATGTCTCTTTCTCCCTTTTTCTGTATGTTACAT 2156
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TATATAACATCTCATCTATGACTGTTATAAGTGTAGTTCTTTTATTGCTCAGTGATATTT 2216
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GTGTTTGTTATGGAAAAATTGAACTATATATGAAGTAATAAGTTAAACGATAAGATAGTT 2276
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TTGTATTGTGCAAATTCAAAAAAGTTGTAAATGATAAGTTATCTAATATAAAAAAAATGC 2336
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      ATAAATCATACCTTTGACTTCATTCCATCTTCTGCTAGCCATAAGAAATCGTGAATCCTT 2396
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GGAAGATGTTGCCTGAATGCATAAGAATTTGGATTTTCTGTCCAGCAACATATCATATTT 2456
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AATACCTAATTATAAGATAATATAAGTGGAAAGTACCGAGAACAATGAGTATTTCAATTG 2516
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TCAAGATGGTTTCCCGTAAAAAAAAGAACCTCCAACAGGTAATAGTTGGCATGTGTTGAC 2576
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      CATGTGCATTATGATATGGCTAGAACTTGGATTATAATTCTTGTCTTCCATGCATAACTT 2636
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AGATCGGTTTACTTCACTATATGACCCATGCGATTCAACCATGACACCTCCATGCATGTT 2696
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      ATCCTTTTATATGAAAATACAGTAATAAAGGTGCAAGTACATATATATATTCACACATAT 2756
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GCTGATTAGCGTTGGGTACAATGCAGATCGTGGATACTAGTAGGTTTCTGATAGTACAAG 2816
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AGCATAAACACATCAATGCATTGGTCCATGTGCATGTGGCCCCATGGAAAGCCTAAGGAA 2876
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GGTCATGTGTTCAACTATTCTGAAAGAAAAATAGAAGAGTGTTGAGCTTGGAAATATTGT 2936
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TGCATATAGTTCGTCTAGTTAGGAAACATAGATACACCACCCATGTCCTAGCAGTTGCTA 2996
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      CTGCGCATGTACCACAGCCACCTTCGGCTGACATCATCCATCACAGCTACCCCTGGCTGT 3056
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TGTTTTCGTGTGTATGTTGCTGCTCTTCTATTTCTGTAACACCCCAACCTCCAAACCTTT 3116
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      AGTAGCCTAGCTCTACGCGTTGAGCAGGCCCACGCTCACGTAGCACCCCACTTACACTTT 3176
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TGTTCTCTACTCGTGTAAACAGGTTAAACTAGAGGTATTATGGTTGGAGTGAACTGGGTA 3236
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TATAAGCTGGCCCAAACCTATCTAGACTCTTCATGTAGGACTACTCTCAAACGAACACTT 3296
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TGGTCTAGCGTGTCTAAATTGGAAAAAGAACACACCTGGGCCAAAACAAACTAAATGGTT 3356
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      GTTCGATCTGTACATTGCTTCTTCTACTACTAGGTGATTCCCCGTGCTTTGCTGTGGGAA 3416
consensus_2566#1      ------------------------------------------------------------
                                                                                  

consensus_2566#0      TTACTAAGCAATCCTCAATATATTTTTTCAACAATCA 3453
consensus_2566#1      -------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)