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Oryza sativa
cluster # 2570 cluster # 2570       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2570#0 length = 1388 sequences # 2  

consensusID : consensus_2570#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1388
fasta sequence
                              [CATCAGCCATAACTACCAGCACACACAACGACTACCCTTCTTTAAAAGGAAACCTCACAGAGCCCAAGGCTTCTCCATGCCGTTGCCCTAAGTTGTCTTCTCCAATCTCCACTCCCCACCCATCGATCAACTCACAGCTCGATCCAGCCCCCTCCAGATCTTCAGATCGGTGGATCGATTGATCAACATGGGGAGGGGGAAGATTGAGATAAAGAGAATCGAGAACAAGACGAGCCGTCAGGTGACCTTCTGCAAGCGCAGGAATGGGCTGCTGAAGAAGGCCTACGAGCTCGCCATACTCTGCGACGCTGAGATCGCACTCATCGTCTTCTCCAGCCGAGGACGCCTCTATGAGTTCTCCAATGTAAACAGCACAAGGTCAACAATCGAGAGGTACAAGAAAGCCTCTGCCAGCACTTCAGGATCCGCTCCAGTGATAGACGTCAATTCTCATCAATACTTTCAGCAAGAAGCAGCAAAAATGCGCCACCAGATACAGACCTTGCAGAATGCAAACAGGCACCTCATCGGTGAGTCCATTGGCAATATGACCGCAAAGGAGCTCAAGAGCCTTGAAAATCGGCTTGAAAAGGGCATCAGCCGAATTCGATCAAAGAAGCATGAGCTGCTGTTCTCGGAGATCGAATACATGCAGAAAAGGGAAGCAGATCTTCAGAACGAGAACATGTTCCTGAGAGCCAAGGTGGCAGAGGCCGAGCGAGCTGAACATGATGATCAGCAGGCGGCGGAGGACGACGAGATGGCGCCGGCGCCGGCGGTCGGCGGCGGGTCATCGTCGGGGACAGAGCTGGAGGCGCTGCCGGCGACGTTCGACACAAGGGAATACTACCAGCCGGCGCCGCCGGTGAGCATGCTGGCCGCCGCGGCGGCGGCGGCGGCGGCGCAGTACTCGTCGGACCACCACCAGACTGCTCTCCACCTCGGCTACTTCAAGGTCGACTCCGGCAAAGGCGGCCTCCTCTAGATCGATCGCCATGGATGCAAATATTGCATGCATTCGATCGAATTATACTGTATTCCGTAAGAGCGACGACGATGAAGATGACAATAATTATTGTGGTATTGTACGTATAGTACGCTGGTAGACCTACGTATACGTATACGTATGTATGATGAAGAATAAGGTGGTGTTTGGTTGGAGGGGCTAAAGTGGGGCTAAACTTTAGTTCCTCTCACAAAAATATAAGTTCCTATTATAGAGACTTATATTTTTGTGAGAGAGACTAAATTTAGTCCTAGTTCCCAAACACCCCTAATATACATTTGTGGTGTGCATGCATGGTGTGTGGGTACTATATGATCAGAGTGTGCTGCATATGCGTATTCCGTTTGCTAGCTCTGACATGCATTTGTCTAAATATATATTT]

[+] EMBL AK070958             [CATCAGCCATAACTACCAGCACACACAACGACTACCCTTCTTTAAAAGGAAACCTCACAGAGCCCAAGGCTTCTCCATGCCGTTGCCCTAAGTTGTCTTCTCCAATCTCCACTCCCCACCCATCGATCAACTCACAGCTCGATCCAGCCCCCTCCAGATCTTCAGATCGGTGGATCGATTGATCAACATGGGGAGGGGGAAGATTGAGATAAAGAGAATCGAGAACAAGACGAGCCGTCAGGTGACCTTCTGCAAGCGCAGGAATGGGCTGCTGAAGAAGGCCTACGAGCTCGCCATACTCTGCGACGCTGAGATCGCACTCATCGTCTTCTCCAGCCGAGGACGCCTCTATGAGTTCTCCAATGTAAACAGCACAAGGTCAACAATCGAGAGGTACAAGAAAGCCTCTGCCAGCACTTCAGGATCCGCTCCAGTGATAGACGTCAATTCTCATCAATACTTTCAGCAAGAAGCAGCAAAAATGCGCCACCAGATACAGACCTTGCAGAATGCAAACAGGCACCTCATCGGTGAGTCCATTGGCAATATGACCGCAAAGGAGCTCAAGAGCCTTGAAAATCGGCTTGAAAAGGGCATCAGCCGAATTCGATCAAAGAAGCATGAGCTGCTGTTCTCGGAGATCGAATACATGCAGAAAAGGGAAGCAGATCTTCAGAACGAGAACATGTTCCTGAGAGCCAAGGTGGCAGAGGCCGAGCGAGCTGAACATGATGATCAGCAGGCGGCGGAGGACGACGAGATGGCGCCGGCGCCGGCGGTCGGCGGCGGGTCATCGTCGGGGACAGAGCTGGAGGCGCTGCCGGCGACGTTCGACACAAGGGAATACTACCAGCCGGCGCCGCCGGTGAGCATGCTGGCCGCCGCGGCGGCGGCGGCGGCGGCGCAGTACTCGTCGGACCACCACCAGACTGCTCTCCACCTCGGCTACTTCAAGGTCGACTCCGGCAAAGGCGGCCTCCTCTAGATCGATCGCCATGGATGCAAATATTGCATGCATTCGATCGAATTATACTGTATTCCGTAAGAGCGACGACGATGAAGATGACAATAATTATTGTGGTATTGTACGTATAGTACGCTGGTAGACCTACGTATACGTATACGTATGTATGATGAAGAATAAGGTGGTGTTTGGTTGGAGGGGCTAAAGTGGGGCTAAACTTTAGTTCCTCTCACAAAAATATAAGTTCCTATTATAGAGACTTATATTTTTGTGAGAGAGACTAAATTTAGTCCTAGTTCCCAAACACCCCTAATATACATTTGTGGTGTGCATGCATGGTGTGTGGGTACTATATGATCAGAGTGTGCTGCATATGCGTATTCCGTTTGCTAGCTCTGACATGCATTTGTCTAAATATATATTT]
[+] EMBL AY177693             [                                                                                                                                                                                                    GGGAAGATTGAGATAAAGAGAATCGAGAACAAGACGAGCCGTCAGGTGACCTTCTGCAAGCGCAGGAATGGGCTGCTGAAGAAGGCCTACGAGCTCGCCATACTCTGCGACGCTGAGATCGCACTCATCGTCTTCTCCAGCCGAGGACGCCTCTATGAGTTCTCCAATGTAAACAGCACAAGGTCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_2570#0 CATCAGCCATAACTACCAGCACACACAACGACTACCCTTCTTTAAAAGGAAACCTCACAG AGCCCAAGGCTTCTCCATGCCGTTGCCCTAAGTTGTCTTCTCCAATCTCCACTCCCCACC CATCGATCAACTCACAGCTCGATCCAGCCCCCTCCAGATCTTCAGATCGGTGGATCGATT GATCAACATGGGGAGGGGGAAGATTGAGATAAAGAGAATCGAGAACAAGACGAGCCGTCA GGTGACCTTCTGCAAGCGCAGGAATGGGCTGCTGAAGAAGGCCTACGAGCTCGCCATACT CTGCGACGCTGAGATCGCACTCATCGTCTTCTCCAGCCGAGGACGCCTCTATGAGTTCTC CAATGTAAACAGCACAAGGTCAACAATCGAGAGGTACAAGAAAGCCTCTGCCAGCACTTC AGGATCCGCTCCAGTGATAGACGTCAATTCTCATCAATACTTTCAGCAAGAAGCAGCAAA AATGCGCCACCAGATACAGACCTTGCAGAATGCAAACAGGCACCTCATCGGTGAGTCCAT TGGCAATATGACCGCAAAGGAGCTCAAGAGCCTTGAAAATCGGCTTGAAAAGGGCATCAG CCGAATTCGATCAAAGAAGCATGAGCTGCTGTTCTCGGAGATCGAATACATGCAGAAAAG GGAAGCAGATCTTCAGAACGAGAACATGTTCCTGAGAGCCAAGGTGGCAGAGGCCGAGCG AGCTGAACATGATGATCAGCAGGCGGCGGAGGACGACGAGATGGCGCCGGCGCCGGCGGT CGGCGGCGGGTCATCGTCGGGGACAGAGCTGGAGGCGCTGCCGGCGACGTTCGACACAAG GGAATACTACCAGCCGGCGCCGCCGGTGAGCATGCTGGCCGCCGCGGCGGCGGCGGCGGC GGCGCAGTACTCGTCGGACCACCACCAGACTGCTCTCCACCTCGGCTACTTCAAGGTCGA CTCCGGCAAAGGCGGCCTCCTCTAGATCGATCGCCATGGATGCAAATATTGCATGCATTC GATCGAATTATACTGTATTCCGTAAGAGCGACGACGATGAAGATGACAATAATTATTGTG GTATTGTACGTATAGTACGCTGGTAGACCTACGTATACGTATACGTATGTATGATGAAGA ATAAGGTGGTGTTTGGTTGGAGGGGCTAAAGTGGGGCTAAACTTTAGTTCCTCTCACAAA AATATAAGTTCCTATTATAGAGACTTATATTTTTGTGAGAGAGACTAAATTTAGTCCTAG TTCCCAAACACCCCTAATATACATTTGTGGTGTGCATGCATGGTGTGTGGGTACTATATG ATCAGAGTGTGCTGCATATGCGTATTCCGTTTGCTAGCTCTGACATGCATTTGTCTAAAT ATATATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)