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Oryza sativa
cluster # 2581 cluster # 2581       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2581#0 length = 1332 sequences # 2  

consensusID : consensus_2581#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1332
fasta sequence
                              [TGGTCTGTACCTCCACGGCTCCACCTCACTCGTCGCAGCTCGAGAGTTCGCCCAAGTCTCCCCCCGATCCGTGCAGAGATCCTCGTGCGTCCGAGGTGAGCATGGAGGTGATGCATGATACCACTGGGAAGAAGGAAGTGGTTGTCTGTTATATGAACGCCCCTCTACCGTACATGATTGAAGAGAATTACGGGGGATGCTTCTTTGAAGACGACGTTGATCTTGCACAGGTTCTCCAGGACCAGGAAATAGTCTATCAATTAATACAAGGAAATTATGGTACTGGTTCATCCAAAACTCATTCAAATCCTAGTTCTAGTTATAGCCATGGATGTGAATTGGGTGAACGGAAACCATCAGGAGTTGCAAGTTATGAAGCGCAACTAGTTGTTGATGAAGCTTTAGCTCGAGAGCTGCAACAGATGGAGGACCAACTAGCAAGTGCATCAATTGATGACCATAACATAATAGAACATGGAAGAAAGCCAATAGCTTCTTCAACATCTAGCGGTGGTAATGCTTCTGCAAGCAGACCTCCTCAGGTAGTGATGGAGGATGGCATTGATCCAGATAACATGACTTACGAGGAACTGCAACAATTAGGGGAAGCTATAGGTACTGAAAGCAAAGGGTTGCCGGAAGATGTGATAGCGCTCTTGCCTACTTCAACATACAAAATTAGGATATTCTCAAGAAAGGAAAAGCATGACGAATGTGTGATATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGTACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTATGCCCTGTTTGCAACAAGGAGGTTTATGGGTCGGGCAAGTGAAACATTACGGATTCATCTTTCATGAAAAAGGAGGCAAACATGACGGATTCATCTCACGCCAGTTCAACAGGCTTAAGAAGTATCATTGTTCACTGGCTGTGCACTCATTAGCATGCATCATGGTGGCAGGAAAGGCAATGCATTGTATTGCTAATGATCGGAAGATTGTCAGCGAGTTACCGAGGAATGTCTCAGCAAGATAAATAAGATAGATGCTTCTGTTCTGTTTTTAAGCTTTATGGAGTCTTCGAGTAACTGAGACTCTTATTTCAGCTTTCAGGCCTGGTGCTTTACACACACTGTATTGTAACATATCATAGGATGTATATCAGTATGTGTATACTGAAGATTAGTTGCATGCTAGCATCTCTGTATTGCTAGTCCGCCTACCTTCTTTGTGATTGCATTTCCGCATTGCTTGTACTCTTATCTTTTATGGTATCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071401             [TGGTCTGTACCTCCACGGCTCCACCTCACTCGTCGCAGCTCGAGAGTTCGCCCAAGTCTCCCCCCGATCCGTGCAGAGATCCTCGTGCGTCCGAGGTGAGCATGGAGGTGATGCATGATACCACTGGGAAGAAGGAAGTGGTTGTCTGTTATATGAACGCCCCTCTACCGTACATGATTGAAGAGAATTACGGGGGATGCTTCTTTGAAGACGACGTTGATCTTGCACAGGTTCTCCAGGACCAGGAAATAGTCTATCAATTAATACAAGGAAATTATGGTACTGGTTCATCCAAAACTCATTCAAATCCTAGTTCTAGTTATAGCCATGGATGTGAATTGGGTGAACGGAAACCATCAGGAGTTGCAAGTTATGAAGCGCAACTAGTTGTTGATGAAGCTTTAGCTCGAGAGCTGCAACAGATGGAGGACCAACTAGCAAGTGCATCAATTGATGACCATAACATAATAGAACATGGAAGAAAGCCAATAGCTTCTTCAACATCTAGCGGTGGTAATGCTTCTGCAAGCAGACCTCCTCAGGTAGTGATGGAGGATGGCATTGATCCAGATAACATGACTTACGAGGAACTGCAACAATTAGGGGAAGCTATAGGTACTGAAAGCAAAGGGTTGCCGGAAGATGTGATAGCGCTCTTGCCTACTTCAACATACAAAATTAGGATATTCTCAAGAAAGGAAAAGCATGACGAATGTGTGATATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGTACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTATGCCCTGTTTGCAACAAGGAGGTTTATGGGTCGGGCAAGTGAAACATTACGGATTCATCTTTCATGAAAAAGGAGGCAAACATGACGGATTCATCTCACGCCAGTTCAACAGGCTTAAGAAGTATCATTGTTCACTGGCTGTGCACTCATTAGCATGCATCATGGTGGCAGGAAAGGCAATGCATTGTATTGCTAATGATCGGAAGATTGTCAGCGAGTTACCGAGGAATGTCTCAGCAAGATAAATAAGATAGATGCTTCTGTTCTGTTTTTAAGCTTTATGGAGTCTTCGAGTAACTGAGACTCTTATTTCAGCTTTCAGGCCTGGTGCTTTACACACACTGTATTGTAACATATCATAGGATGTATATCAGTATGTGTATACTGAAGATTAGTTGCATGCTAGCATCTCTGTATTGC                                                                                        ]
[-] EMBL CA763051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGATGTGATAGCGCTCTTGCCTACTTCAACATACAAAATTAGGAT TTCTCAAGAAAGGAAAAGCATGNCGAATGTGTGATATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGTACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTATGCCCTGTTTGCAACAAGGAGGTTTATGGGTCGGGCAAGTGAAACATTACGGATTCATCTTTCATGAAAAAGGAGGCAAACATGACGGATTCATCTCACGCCAGTTCAACAGGCTTAAGAAGTATCATTGTTCCCCGGCTGTGCACTCATTAGCATGCATCATGGTGGCAGGAAAGGCTATGCATTGTATTGCTAATGATCGGAAGATTGTTAGCGAGTTACCGAGGAATGTCTCAGCAAGATAAATAAGGTAGATGCTTTTGTTCTGTTTTTAAGCTTTATGGAGTTTTCGAGTAACTGAGACTTTTATTTCAGCTTTCAGGCCTGGTGCTTTACCCCCCCTGTATTGTAACATATCATAGGATGTATATCCGTATGTGTATACTGAAGATTAGTTGCATGCTAGCATCTCTGTATTGCTAGTCCGCCTACCTTCTTTGTGATTGCATTTCCGCATTGCTTGTACTCTTATCTTTTATGGTATCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_2581#0 TGGTCTGTACCTCCACGGCTCCACCTCACTCGTCGCAGCTCGAGAGTTCGCCCAAGTCTC CCCCCGATCCGTGCAGAGATCCTCGTGCGTCCGAGGTGAGCATGGAGGTGATGCATGATA CCACTGGGAAGAAGGAAGTGGTTGTCTGTTATATGAACGCCCCTCTACCGTACATGATTG AAGAGAATTACGGGGGATGCTTCTTTGAAGACGACGTTGATCTTGCACAGGTTCTCCAGG ACCAGGAAATAGTCTATCAATTAATACAAGGAAATTATGGTACTGGTTCATCCAAAACTC ATTCAAATCCTAGTTCTAGTTATAGCCATGGATGTGAATTGGGTGAACGGAAACCATCAG GAGTTGCAAGTTATGAAGCGCAACTAGTTGTTGATGAAGCTTTAGCTCGAGAGCTGCAAC AGATGGAGGACCAACTAGCAAGTGCATCAATTGATGACCATAACATAATAGAACATGGAA GAAAGCCAATAGCTTCTTCAACATCTAGCGGTGGTAATGCTTCTGCAAGCAGACCTCCTC AGGTAGTGATGGAGGATGGCATTGATCCAGATAACATGACTTACGAGGAACTGCAACAAT TAGGGGAAGCTATAGGTACTGAAAGCAAAGGGTTGCCGGAAGATGTGATAGCGCTCTTGC CTACTTCAACATACAAAATTAGGATATTCTCAAGAAAGGAAAAGCATGACGAATGTGTGA TATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGT ACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTATGCCCTGTTTGCAACA AGGAGGTTTATGGGTCGGGCAAGTGAAACATTACGGATTCATCTTTCATGAAAAAGGAGG CAAACATGACGGATTCATCTCACGCCAGTTCAACAGGCTTAAGAAGTATCATTGTTCACT GGCTGTGCACTCATTAGCATGCATCATGGTGGCAGGAAAGGCAATGCATTGTATTGCTAA TGATCGGAAGATTGTCAGCGAGTTACCGAGGAATGTCTCAGCAAGATAAATAAGATAGAT GCTTCTGTTCTGTTTTTAAGCTTTATGGAGTCTTCGAGTAACTGAGACTCTTATTTCAGC TTTCAGGCCTGGTGCTTTACACACACTGTATTGTAACATATCATAGGATGTATATCAGTA TGTGTATACTGAAGATTAGTTGCATGCTAGCATCTCTGTATTGCTAGTCCGCCTACCTTC TTTGTGATTGCATTTCCGCATTGCTTGTACTCTTATCTTTTATGGTATCAAAAAAAAAAA AAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)