cluster # 2588

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Oryza sativa
cluster # 2588 cluster # 2588 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2588#0 length = 960 sequences # 2

consensusID : consensus_2588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 960
fasta sequence

                              [AAAGCAAAAAAAAAAGGAAAATAAAGGAGAAAAGAGTGGCGGCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGAGCGTGGTGGTGGTGCACAACGTGGCGAAGCGGCACAACGTGGGGACGCTGGCGCGGAGCGCGACGGCGTTCGGGGTGGCGGAGGTGGTGGTCGTCGGCCGCCGCGACGTCAGCGCCTTCGGCAGCCACGGCGCCACCTCCCACCTCCGCTTCCGCCACTTCGCCTCCCTCCCCCTCGCCCGCGCCTACCTCAAGGACGAGAGGGGGTGTGACATTTGCGGCGTGGAGATCACCCACAACGCGCTGCCGGTGACGGCCCATCCGTTCCGCCGGAGCACCGCCTTCCTCTTCGGCAATGAGGGTACAGGACTCTCGCAGAAGGAGTGCGAGATCTGCGACTTTTTTGTCTACATCCCTCAGTATGGTGGTGGAACCGCATCATTGAATGTTACAGTTGCAGCGTCGATTGTTCTTCATCACTTTGGAGTCTGGGCTGGCTTTCCAGAACGAGGGCGAGAAGGTAATAAATTCGTTGTAGCTGATAAACCAAAGGGCCAATCTAGGGGACTCTACTGTACAGACTCAATTGAAGAAGTGATTGAAGAACGGAAGATGCGAAGAGAAAATGCCTGTGACATATTTGAGGAAAATGGAAGTAGCGAGCATCAGGAATCAAATGTTTTAGGCACGATGCTGTCAGACTAGAGTATCCCATCTCTTCTTTGCTTACCAATCCAGTCTCTGCATTGGTTGAGGGATGAAACTAATTTGCAATACCACATACAGCACAATATCCAGCACTGGTTTCTCTTTTCCAGGGTGGCACAAATATATGTAGAGTAAATTTCAGAGAACTCCATTTTTATGGTCAAAGTTGCAGTTTCGCGACTCGGTAAGGAGCATAATAGCACCCTTTCAAACCAAATTCTTGTGGCAATGATTAAGA]

[+] EMBL AK071339             [AAAGCAAAAAAAAAAGGAAAATAAAGGAGAAAAGAGTGGCGGCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGAGCGTGGTGGTGGTGCACAACGTGGCGAAGCGGCACAACGTGGGGACGCTGGCGCGGAGCGCGACGGCGTTCGGGGTGGCGGAGGTGGTGGTCGTCGGCCGCCGCGACGTCAGCGCCTTCGGCAGCCACGGCGCCACCTCCCACCTCCGCTTCCGCCACTTCGCCTCCCTCCCCCTCGCCCGCGCCTACCTCAAGGACGAGAGGGGGTGTGACATTTGCGGCGTGGAGATCACCCACAACGCGCTGCCGGTGACGGCCCATCCGTTCCGCCGGAGCACCGCCTTCCTCTTCGGCAATGAGGGTACAGGACTCTCGCAGAAGGAGTGCGAGATCTGCGACTTTTTTGTCTACATCCCTCAGTATGGTGGTGGAACCGCATCATTGAATGTTACAGTTGCAGCGTCGATTGTTCTTCATCACTTTGGAGTCTGGGCTGGCTTTCCAGAACGAGGGCGAGAAGGTAATAAATTCGTTGTAGCTGATAAACCAAAGGGCCAATCTAGGGGACTCTACTGTACAGACTCAATTGAAGAAGTGATTGAAGAACGGAAGATGCGAAGAGAAAATGCCTGTGACATATTTGAGGAAAATGGAAGTAGCGAGCATCAGGAATCAAATGTTTTAGGCACGATGCTGTCAGACTAGAGTATCCCATCTCTTCTTTGCTTACCAATCCAGTCTCTGCATTGGTTGAGGGATGAAACTAATTTGCAATACCACATACAGCACAATATCCAGCACTGGTTTCTCTTTTCCAGGGTGGCACAAATATATGTAGAGTAAATTTCAGAGAACTCCATTTTTATGGTCAAAGTTGCAGTTTCGCGACTCGGTAAGGAGCATAATAGCACCCTTTCAAACCAAATTCTTGTGGCAATGATTAAGA]
[+] EMBL AK106875             [                   AATAAAGGAGGAAAGAGTGGCGGCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGAGCGTGGTGGTGGTGCACAACGTGGCGAAGCGGCACAACGTGGGGACGCTGGCGCGGAGCGCGACGGCGTTCGGGGTGGCGGAGGTGGTGGTCGTCGGCCGCCGCGACGTCAGCGCCTTCGGCAGCCACGGCGCCACCTCCCACCTCCGCTTCCGCCACTTCGCCTCCCTCCCCCTCGCCCGCGCCTACCTCAAGGACGAGAGGGGGTGTGACATTTGCGGCGTGGAGATCACCCACAACGCGCTGCCGGTGACGGCCCATCCGTTCCGCCGGAGCACCGCCTTCCTCTTCGGCAATGAGGGTACAGGACTCTCGCAGAAGGAGTGCGAGATCTGCGACTTTTTTGTCTACATCCCTCAGTATGGTGGTGGAACCGCATCATTGAATGTTACAGTTGCAGCGTCGATTGTTCTTCATCACTTTGGAGTCTGGGCTGGCTTTCCAGAACGAGGGCGAGAAGGTAATAAATTCGTTGTAGCTGATAAACCAAAGGGCCAATCTAGGGGACTCTACTGTACAGACTCAATTGAAGAAGTGATTGAAGAACGGAAGATGCGAAGAGAAAATGCCTGTGACATATTTGAGGAAAATGGAAGTAGCGAGCATCAGGAATCAAATGTTTTAGGCACGATGCTGTCAGACTAGAGTATCCCATCTCTTCTTTGCTTACCAATCCAGTCTCTGCATTGGTTGAGGGATGAAACTAATTTGCAATACCACATACAGCACAATATCCAGCACTGGTTTCTCTTTTCCAGGGTGGCACAAATATATGTAGAGTAAATTTCAGAGAACTCCATTTTTATGGTCAAAGTTG                                                                     ]




>consensus_2588#0
AAAGCAAAAAAAAAAGGAAAATAAAGGAGAAAAGAGTGGCGGCCATGGCGGCGGCGGCGG
CGGCGGCGGTGGAGAGCGTGGTGGTGGTGCACAACGTGGCGAAGCGGCACAACGTGGGGA
CGCTGGCGCGGAGCGCGACGGCGTTCGGGGTGGCGGAGGTGGTGGTCGTCGGCCGCCGCG
ACGTCAGCGCCTTCGGCAGCCACGGCGCCACCTCCCACCTCCGCTTCCGCCACTTCGCCT
CCCTCCCCCTCGCCCGCGCCTACCTCAAGGACGAGAGGGGGTGTGACATTTGCGGCGTGG
AGATCACCCACAACGCGCTGCCGGTGACGGCCCATCCGTTCCGCCGGAGCACCGCCTTCC
TCTTCGGCAATGAGGGTACAGGACTCTCGCAGAAGGAGTGCGAGATCTGCGACTTTTTTG
TCTACATCCCTCAGTATGGTGGTGGAACCGCATCATTGAATGTTACAGTTGCAGCGTCGA
TTGTTCTTCATCACTTTGGAGTCTGGGCTGGCTTTCCAGAACGAGGGCGAGAAGGTAATA
AATTCGTTGTAGCTGATAAACCAAAGGGCCAATCTAGGGGACTCTACTGTACAGACTCAA
TTGAAGAAGTGATTGAAGAACGGAAGATGCGAAGAGAAAATGCCTGTGACATATTTGAGG
AAAATGGAAGTAGCGAGCATCAGGAATCAAATGTTTTAGGCACGATGCTGTCAGACTAGA
GTATCCCATCTCTTCTTTGCTTACCAATCCAGTCTCTGCATTGGTTGAGGGATGAAACTA
ATTTGCAATACCACATACAGCACAATATCCAGCACTGGTTTCTCTTTTCCAGGGTGGCAC
AAATATATGTAGAGTAAATTTCAGAGAACTCCATTTTTATGGTCAAAGTTGCAGTTTCGC
GACTCGGTAAGGAGCATAATAGCACCCTTTCAAACCAAATTCTTGTGGCAATGATTAAGA

clustalw multiple alignements is not computed in this case