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Oryza sativa
cluster # 2592 cluster # 2592       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2592#0 length = 2268 sequences # 1  
consensus_2592#1 length = 1512 sequences # 1  

consensusID : consensus_2592#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2268
fasta sequence
                              [CCCTCTCGTGTCGCGCGGCTCGCCTGCCCCCGCTCCGCCGACCACGGGCGCACCATGGCGCTGCCGCCACCGACGCCGGAGGTCATGGACGACCTCACCGCCTCGCTCGCGCCGGAGCTCCTCTCCGAGATCCTCCTCCGCCTCCCGCCGGACGAGCCCGAGCAACTCTTCCGCGCTGCCCTAGTCTGCAAGGAATGGCTCCGCGCCATCTGCGACCCCGGCTTCCTCCGCCGCTACCGCGCCTTCCACCGATCCCCTCCCCTGCTCGGCCTCCTTTACGCCGCCAAGTTCTACAGGGAGCCCCCGCCCCCCACCTCGCCCGCACCACCGCAGTGCCCCTCTCGCCCGATCCCACCTTTCGCCGGGCCCTCGATTGCCGCCATGGCCGTGCCCTCCTCCACGCTTCGGACGATGATTGGTATCTCATTGTCTGGGACCCCGTCACCGGCGAACAGCACCGCGTGCCAGAGCCCGGCATCCCGTGGCTGATCTACTCCAGCGCTGTGTTCTGTGCCGTGAGCGGCTGTGACCACCTCGACTGCCACGGCGGTCCCTTCCGAGTGGTCTTTGTGGCCACCGATGACGGGGCGGATCCAACACCTACACCCACAAAACTCATGGATACCCCGGAGCACCCCCTTCGATTTTTTCACTATGAATGAACTAAAAGTCCCTAAATGGCTGGAGGTTGAAAAAACTGTGTAATTGAGCCTCCCTAATTTTTTGTTTCTGATCCACCCGTGATGAGTACAAAGATCTCGTTAAGGCGAGCATGTACTCATCGGAGACCGGGGCGTGGAGCACCCCGGTAGTTCTTGATGATGGTCTTGATTCCTGGGAACAGCGATGGCGAGATGCACAGAGTAGAGGTGAATTCTACCGCGTACCTTATGTCATGCCTAGGCGAGTTGCCCTTGTCGGAGATGAAATCTACTTCACACTTCGGGAGGATAATGCCATCATCAAGTACAACTGGGGCATGCACTGCTTATCTGAAATTGACTCGCCGTCGCCAGACGTGTATGGCATTGCCCTCATGGAGATGGAGAACGGTTCACTGGGTTTTGCCTGCATTGAGGATTCCAGCCTTTATGTGTGGTCACGGAAGGTGAATTCAGAAGGGGCAGCAGAATGGGTACAATGCAGGGTGATCAAGCTGGACAAAATGATACCTGTTGCCAATCTCAGTGATGAAGCATTTGTGGTTGGCTCTGGGGAGGGTATGGGTGCCATATTCGTGAGCACAGGTGTTGGCTTGTTCACGATCGAGCTCAAGTCAAGGAGGGTGAAGAAGGTTGCAGAGCCTGAGGTCTACTTTAGCATCTTACCCTACATGAGCTTCTACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATGTCATGCTCAAGAGTAACTTGTTGCAAAATGGACAAATCCATTGTCTTGACTCTTGAATCTGCTGCCACTGACTTCTTCCAGAACTACTACTACTACTAAGCTGTTTATTTTTTGTTGGGCAGTACAAGTACGAACAATGCCAAGTCTGATGTTCAAATGTGGTTGTTGTGTCAAATTCATCCTACCGACCATGAACTAGATCAGCAAGTCGTGCTAAGCTGAATAGCTGGCTCCCTATTCTTTATTGTTCGTTTTGAGAGCATGGTTTGCGCTTTGGCCTTACAGGAATGGGCCAACTATCGGAATAAGCATCAACACGCTGATGAGGCCATGAAGGCTCAGGTGATAGTGAAGGGTAAGCAGCCATGAGAAGGGGAAAAGTTAAGATCAAGCCCATTGCAAATAGAAAGGCTCGTGATGTATGCTTCTCCAAGCGCCGCCAGGTTGTAATCAAGAAGGCTAACGAACTCAGCATATTATGTGGTGTCAATGTTGCTGTTGCTGTGCTCTCACCTGCTGGTAAGCCCTTTTTCTTTGGCTGCCCTACTGTTCAAGCTGTCACTCGTCGCTTACTTGGTGTGGGTCCTAGTAACCCTACCATGGGTGATGGGGGCAATGGTGATGAGACTGACATAGTGCATGAGCTCAATCTGAAGTACCAGAAGTTGCAACAAGAGAATGAAGTGGAGAAGAAGAAAAACCAGCGTGGTCAGGATGTGAGGCTAGCTAGTGATGTAAATGCATTGGGGCTGCATGAGTTGGAGGCATTCGACAGTAACCTCAATGTAATAGATGACATTGTCGATTCAAATGATGTGGTTAAGAATGCCAAGCAAACAGCTGAGCCCCAGACTCAGATGAGCGTGGCA]

[+] EMBL AK107112             [CCCTCTCGTGTCGCGCGGCTCGCCTGCCCCCGCTCCGCCGACCACGGGCGCACCATGGCGCTGCCGCCACCGACGCCGGAGGTCATGGACGACCTCACCGCCTCGCTCGCGCCGGAGCTCCTCTCCGAGATCCTCCTCCGCCTCCCGCCGGACGAGCCCGAGCAACTCTTCCGCGCTGCCCTAGTCTGCAAGGAATGGCTCCGCGCCATCTGCGACCCCGGCTTCCTCCGCCGCTACCGCGCCTTCCACCGATCCCCTCCCCTGCTCGGCCTCCTTTACGCCGCCAAGTTCTACAGGGAGCCCCCGCCCCCCACCTCGCCCGCACCACCGCAGTGCCCCTCTCGCCCGATCCCACCTTTCGCCGGGCCCTCGATTGCCGCCATGGCCGTGCCCTCCTCCACGCTTCGGACGATGATTGGTATCTCATTGTCTGGGACCCCGTCACCGGCGAACAGCACCGCGTGCCAGAGCCCGGCATCCCGTGGCTGATCTACTCCAGCGCTGTGTTCTGTGCCGTGAGCGGCTGTGACCACCTCGACTGCCACGGCGGTCCCTTCCGAGTGGTCTTTGTGGCCACCGATGACGGGGCGGATCCAACACCTACACCCACAAAACTCATGGATACCCCGGAGCACCCCCTTCGATTTTTTCACTATGAATGAACTAAAAGTCCCTAAATGGCTGGAGGTTGAAAAAACTGTGTAATTGAGCCTCCCTAATTTTTTGTTTCTGATCCACCCGTGATGAGTACAAAGATCTCGTTAAGGCGAGCATGTACTCATCGGAGACCGGGGCGTGGAGCACCCCGGTAGTTCTTGATGATGGTCTTGATTCCTGGGAACAGCGATGGCGAGATGCACAGAGTAGAGGTGAATTCTACCGCGTACCTTATGTCATGCCTAGGCGAGTTGCCCTTGTCGGAGATGAAATCTACTTCACACTTCGGGAGGATAATGCCATCATCAAGTACAACTGGGGCATGCACTGCTTATCTGAAATTGACTCGCCGTCGCCAGACGTGTATGGCATTGCCCTCATGGAGATGGAGAACGGTTCACTGGGTTTTGCCTGCATTGAGGATTCCAGCCTTTATGTGTGGTCACGGAAGGTGAATTCAGAAGGGGCAGCAGAATGGGTACAATGCAGGGTGATCAAGCTGGACAAAATGATACCTGTTGCCAATCTCAGTGATGAAGCATTTGTGGTTGGCTCTGGGGAGGGTATGGGTGCCATATTCGTGAGCACAGGTGTTGGCTTGTTCACGATCGAGCTCAAGTCAAGGAGGGTGAAGAAGGTTGCAGAGCCTGAGGTCTACTTTAGCATCTTACCCTACATGAGCTTCTACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATGTCATGCTCAAGAGTAACTTGTTGCAAAATGGACAAATCCATTGTCTTGACTCTTGAATCTGCTGCCACTGACTTCTTCCAGAACTACTACTACTACTAAGCTGTTTATTTTTTGTTGGGCAGTACAAGTACGAACAATGCCAAGTCTGATGTTCAAATGTGGTTGTTGTGTCAAATTCATCCTACCGACCATGAACTAGATCAGCAAGTCGTGCTAAGCTGAATAGCTGGCTCCCTATTCTTTATTGTTCGTTTTGAGAGCATGGTTTGCGCTTTGGCCTTACAGGAATGGGCCAACTATCGGAATAAGCATCAACACGCTGATGAGGCCATGAAGGCTCAGGTGATAGTGAAGGGTAAGCAGCCATGAGAAGGGGAAAAGTTAAGATCAAGCCCATTGCAAATAGAAAGGCTCGTGATGTATGCTTCTCCAAGCGCCGCCAGGTTGTAATCAAGAAGGCTAACGAACTCAGCATATTATGTGGTGTCAATGTTGCTGTTGCTGTGCTCTCACCTGCTGGTAAGCCCTTTTTCTTTGGCTGCCCTACTGTTCAAGCTGTCACTCGTCGCTTACTTGGTGTGGGTCCTAGTAACCCTACCATGGGTGATGGGGGCAATGGTGATGAGACTGACATAGTGCATGAGCTCAATCTGAAGTACCAGAAGTTGCAACAAGAGAATGAAGTGGAGAAGAAGAAAAACCAGCGTGGTCAGGATGTGAGGCTAGCTAGTGATGTAAATGCATTGGGGCTGCATGAGTTGGAGGCATTCGACAGTAACCTCAATGTAATAGATGACATTGTCGATTCAAATGATGTGGTTAAGAATGCCAAGCAAACAGCTGAGCCCCAGACTCAGATGAGCGTGGCA]


>consensus_2592#0 CCCTCTCGTGTCGCGCGGCTCGCCTGCCCCCGCTCCGCCGACCACGGGCGCACCATGGCG CTGCCGCCACCGACGCCGGAGGTCATGGACGACCTCACCGCCTCGCTCGCGCCGGAGCTC CTCTCCGAGATCCTCCTCCGCCTCCCGCCGGACGAGCCCGAGCAACTCTTCCGCGCTGCC CTAGTCTGCAAGGAATGGCTCCGCGCCATCTGCGACCCCGGCTTCCTCCGCCGCTACCGC GCCTTCCACCGATCCCCTCCCCTGCTCGGCCTCCTTTACGCCGCCAAGTTCTACAGGGAG CCCCCGCCCCCCACCTCGCCCGCACCACCGCAGTGCCCCTCTCGCCCGATCCCACCTTTC GCCGGGCCCTCGATTGCCGCCATGGCCGTGCCCTCCTCCACGCTTCGGACGATGATTGGT ATCTCATTGTCTGGGACCCCGTCACCGGCGAACAGCACCGCGTGCCAGAGCCCGGCATCC CGTGGCTGATCTACTCCAGCGCTGTGTTCTGTGCCGTGAGCGGCTGTGACCACCTCGACT GCCACGGCGGTCCCTTCCGAGTGGTCTTTGTGGCCACCGATGACGGGGCGGATCCAACAC CTACACCCACAAAACTCATGGATACCCCGGAGCACCCCCTTCGATTTTTTCACTATGAAT GAACTAAAAGTCCCTAAATGGCTGGAGGTTGAAAAAACTGTGTAATTGAGCCTCCCTAAT TTTTTGTTTCTGATCCACCCGTGATGAGTACAAAGATCTCGTTAAGGCGAGCATGTACTC ATCGGAGACCGGGGCGTGGAGCACCCCGGTAGTTCTTGATGATGGTCTTGATTCCTGGGA ACAGCGATGGCGAGATGCACAGAGTAGAGGTGAATTCTACCGCGTACCTTATGTCATGCC TAGGCGAGTTGCCCTTGTCGGAGATGAAATCTACTTCACACTTCGGGAGGATAATGCCAT CATCAAGTACAACTGGGGCATGCACTGCTTATCTGAAATTGACTCGCCGTCGCCAGACGT GTATGGCATTGCCCTCATGGAGATGGAGAACGGTTCACTGGGTTTTGCCTGCATTGAGGA TTCCAGCCTTTATGTGTGGTCACGGAAGGTGAATTCAGAAGGGGCAGCAGAATGGGTACA ATGCAGGGTGATCAAGCTGGACAAAATGATACCTGTTGCCAATCTCAGTGATGAAGCATT TGTGGTTGGCTCTGGGGAGGGTATGGGTGCCATATTCGTGAGCACAGGTGTTGGCTTGTT CACGATCGAGCTCAAGTCAAGGAGGGTGAAGAAGGTTGCAGAGCCTGAGGTCTACTTTAG CATCTTACCCTACATGAGCTTCTACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAG GACTCACTGATCTTTGATGTCATGCTCAAGAGTAACTTGTTGCAAAATGGACAAATCCAT TGTCTTGACTCTTGAATCTGCTGCCACTGACTTCTTCCAGAACTACTACTACTACTAAGC TGTTTATTTTTTGTTGGGCAGTACAAGTACGAACAATGCCAAGTCTGATGTTCAAATGTG GTTGTTGTGTCAAATTCATCCTACCGACCATGAACTAGATCAGCAAGTCGTGCTAAGCTG AATAGCTGGCTCCCTATTCTTTATTGTTCGTTTTGAGAGCATGGTTTGCGCTTTGGCCTT ACAGGAATGGGCCAACTATCGGAATAAGCATCAACACGCTGATGAGGCCATGAAGGCTCA GGTGATAGTGAAGGGTAAGCAGCCATGAGAAGGGGAAAAGTTAAGATCAAGCCCATTGCA AATAGAAAGGCTCGTGATGTATGCTTCTCCAAGCGCCGCCAGGTTGTAATCAAGAAGGCT AACGAACTCAGCATATTATGTGGTGTCAATGTTGCTGTTGCTGTGCTCTCACCTGCTGGT AAGCCCTTTTTCTTTGGCTGCCCTACTGTTCAAGCTGTCACTCGTCGCTTACTTGGTGTG GGTCCTAGTAACCCTACCATGGGTGATGGGGGCAATGGTGATGAGACTGACATAGTGCAT GAGCTCAATCTGAAGTACCAGAAGTTGCAACAAGAGAATGAAGTGGAGAAGAAGAAAAAC CAGCGTGGTCAGGATGTGAGGCTAGCTAGTGATGTAAATGCATTGGGGCTGCATGAGTTG GAGGCATTCGACAGTAACCTCAATGTAATAGATGACATTGTCGATTCAAATGATGTGGTT AAGAATGCCAAGCAAACAGCTGAGCCCCAGACTCAGATGAGCGTGGCA



consensusID : consensus_2592#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1512
fasta sequence
                              [TCGAACCCAGGCAAGTAGAAGAACCCCCAAATTCCCCCTTGTCGGCCTATCCCCACCCAAAACCCTCGCGTCCACCCGCCCCCGCCGCCGACGACCTCGCCAGAGGAGCTCATGGACGACGCCATCGCCGCGCTCCCGCCGGAGCTCGTCTCCGAGATCCTCCTCCGCCTCCGGCCGGACGAGCCCGAGCACCTCTTCCGCGCGTCACTCGTCTGCAAGGCATGGCTCCGCGCCATCTGCGACCCCGTCTTCCTCCGCCGCTACCGCGCCTTCCACGGATCCCCGCCGCTGCTCGGCCTCCTCCACAGGCTCCGGGTCATAGACGGGGACCCCGCCCCGCGCCTCGCCCGCACCACGGCGGCGCCCCTCTCCCCCGACCCGGCCTTCCTCCGGGCCCTCGACTGCCGCCATGGCCGCGTCCTCCTCCACGCGTCGAACCTCGGCCTCATCGTCTGGGACCCCGTCACGGGCGAGCAGCACCGCCTGCCGGAATCTGGCATCCCGTGGCTGATCTACACCGCCGCAGTGTTCTGCGCCGTCGGCGGCTGTGACCACCTCGACTGCCACGGCGGCCCCTTCCGAGTGGTCTTCGTGGCCACCGACGACGACGACGAACTCGTCAAGGGGAGTGTGTATTCATCGGAGACCGGTGTGTGGAGCACGCCAGCAACTCTTGATGATGGCTATCAATCCTGGGAAGAGCGTTGGCAGGCGGCCCGCAGTAGAGGCGAATACTACCGCACACCTTATGTCCATCCTAAGCGATGTGCCCTTGTCGGAGATGAAATCTACTTCACACTTCGGAACGGCAATACGATCATCGAGTACAACTGGGGAAAGAACCGCTTATTTATGTTTGACCCGCCGACATCGGACTTGTACTACATTGCCCTCACGGTGATGGAGAATGGTTCACTGGGGTTTGCCGGCATTGAGGGATCCAGCCTTAATGTGTGGTCGAGGAAGGTGAATCCACAAGGGGCTGCAGAATGGGTACTATGCAGGATCATCGAACTGGAGAAAATTATACCTGTAGTCGATCTCAGTGATGAAGCATGTGTGGTTGGCTCTGCAGAGGGTCTGGGTGTCATCTTCGTGAGCACAGGCGTTGGCTTATTCACGATCGAGCTCAAGTCAAGGCGGGTGAAGAAGCTTGAAGAGCCTGGTGTCTACTTTAGTGTCTTACCCTACATGAGCTTCTACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATCTCATGCTCAAGAGTAACATGTTGCAAAATGGACAAATCCATCGTCTTGGATCTGCTGCGATTGACATCTTCCAGAGATACTACTATGAAGTTGTTTATTTTCTGTTGGGCAATGTAGGTATGAGCAATTCGAGTCATCATGTTCGAATATGGTCATCGTATCAAATTCATCAACCATGAACTGTATTCGGTTTAACATGTCTGGCATATTTCAGTTACTTTTTGGTTTATATTGGGCTAAGGTACATGAAACAAA]

[+] EMBL AK071522             [TCGAACCCAGGCAAGTAGAAGAACCCCCAAATTCCCCCTTGTCGGCCTATCCCCACCCAAAACCCTCGCGTCCACCCGCCCCCGCCGCCGACGACCTCGCCAGAGGAGCTCATGGACGACGCCATCGCCGCGCTCCCGCCGGAGCTCGTCTCCGAGATCCTCCTCCGCCTCCGGCCGGACGAGCCCGAGCACCTCTTCCGCGCGTCACTCGTCTGCAAGGCATGGCTCCGCGCCATCTGCGACCCCGTCTTCCTCCGCCGCTACCGCGCCTTCCACGGATCCCCGCCGCTGCTCGGCCTCCTCCACAGGCTCCGGGTCATAGACGGGGACCCCGCCCCGCGCCTCGCCCGCACCACGGCGGCGCCCCTCTCCCCCGACCCGGCCTTCCTCCGGGCCCTCGACTGCCGCCATGGCCGCGTCCTCCTCCACGCGTCGAACCTCGGCCTCATCGTCTGGGACCCCGTCACGGGCGAGCAGCACCGCCTGCCGGAATCTGGCATCCCGTGGCTGATCTACACCGCCGCAGTGTTCTGCGCCGTCGGCGGCTGTGACCACCTCGACTGCCACGGCGGCCCCTTCCGAGTGGTCTTCGTGGCCACCGACGACGACGACGAACTCGTCAAGGGGAGTGTGTATTCATCGGAGACCGGTGTGTGGAGCACGCCAGCAACTCTTGATGATGGCTATCAATCCTGGGAAGAGCGTTGGCAGGCGGCCCGCAGTAGAGGCGAATACTACCGCACACCTTATGTCCATCCTAAGCGATGTGCCCTTGTCGGAGATGAAATCTACTTCACACTTCGGAACGGCAATACGATCATCGAGTACAACTGGGGAAAGAACCGCTTATTTATGTTTGACCCGCCGACATCGGACTTGTACTACATTGCCCTCACGGTGATGGAGAATGGTTCACTGGGGTTTGCCGGCATTGAGGGATCCAGCCTTAATGTGTGGTCGAGGAAGGTGAATCCACAAGGGGCTGCAGAATGGGTACTATGCAGGATCATCGAACTGGAGAAAATTATACCTGTAGTCGATCTCAGTGATGAAGCATGTGTGGTTGGCTCTGCAGAGGGTCTGGGTGTCATCTTCGTGAGCACAGGCGTTGGCTTATTCACGATCGAGCTCAAGTCAAGGCGGGTGAAGAAGCTTGAAGAGCCTGGTGTCTACTTTAGTGTCTTACCCTACATGAGCTTCTACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATCTCATGCTCAAGAGTAACATGTTGCAAAATGGACAAATCCATCGTCTTGGATCTGCTGCGATTGACATCTTCCAGAGATACTACTATGAAGTTGTTTATTTTCTGTTGGGCAATGTAGGTATGAGCAATTCGAGTCATCATGTTCGAATATGGTCATCGTATCAAATTCATCAACCATGAACTGTATTCGGTTTAACATGTCTGGCATATTTCAGTTACTTTTTGGTTTATATTGGGCTAAGGTACATGAAACAAA]


>consensus_2592#1 TCGAACCCAGGCAAGTAGAAGAACCCCCAAATTCCCCCTTGTCGGCCTATCCCCACCCAA AACCCTCGCGTCCACCCGCCCCCGCCGCCGACGACCTCGCCAGAGGAGCTCATGGACGAC GCCATCGCCGCGCTCCCGCCGGAGCTCGTCTCCGAGATCCTCCTCCGCCTCCGGCCGGAC GAGCCCGAGCACCTCTTCCGCGCGTCACTCGTCTGCAAGGCATGGCTCCGCGCCATCTGC GACCCCGTCTTCCTCCGCCGCTACCGCGCCTTCCACGGATCCCCGCCGCTGCTCGGCCTC CTCCACAGGCTCCGGGTCATAGACGGGGACCCCGCCCCGCGCCTCGCCCGCACCACGGCG GCGCCCCTCTCCCCCGACCCGGCCTTCCTCCGGGCCCTCGACTGCCGCCATGGCCGCGTC CTCCTCCACGCGTCGAACCTCGGCCTCATCGTCTGGGACCCCGTCACGGGCGAGCAGCAC CGCCTGCCGGAATCTGGCATCCCGTGGCTGATCTACACCGCCGCAGTGTTCTGCGCCGTC GGCGGCTGTGACCACCTCGACTGCCACGGCGGCCCCTTCCGAGTGGTCTTCGTGGCCACC GACGACGACGACGAACTCGTCAAGGGGAGTGTGTATTCATCGGAGACCGGTGTGTGGAGC ACGCCAGCAACTCTTGATGATGGCTATCAATCCTGGGAAGAGCGTTGGCAGGCGGCCCGC AGTAGAGGCGAATACTACCGCACACCTTATGTCCATCCTAAGCGATGTGCCCTTGTCGGA GATGAAATCTACTTCACACTTCGGAACGGCAATACGATCATCGAGTACAACTGGGGAAAG AACCGCTTATTTATGTTTGACCCGCCGACATCGGACTTGTACTACATTGCCCTCACGGTG ATGGAGAATGGTTCACTGGGGTTTGCCGGCATTGAGGGATCCAGCCTTAATGTGTGGTCG AGGAAGGTGAATCCACAAGGGGCTGCAGAATGGGTACTATGCAGGATCATCGAACTGGAG AAAATTATACCTGTAGTCGATCTCAGTGATGAAGCATGTGTGGTTGGCTCTGCAGAGGGT CTGGGTGTCATCTTCGTGAGCACAGGCGTTGGCTTATTCACGATCGAGCTCAAGTCAAGG CGGGTGAAGAAGCTTGAAGAGCCTGGTGTCTACTTTAGTGTCTTACCCTACATGAGCTTC TACACTCCTGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATCTCA TGCTCAAGAGTAACATGTTGCAAAATGGACAAATCCATCGTCTTGGATCTGCTGCGATTG ACATCTTCCAGAGATACTACTATGAAGTTGTTTATTTTCTGTTGGGCAATGTAGGTATGA GCAATTCGAGTCATCATGTTCGAATATGGTCATCGTATCAAATTCATCAACCATGAACTG TATTCGGTTTAACATGTCTGGCATATTTCAGTTACTTTTTGGTTTATATTGGGCTAAGGT ACATGAAACAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2592#0      -----------------------CCCTCTCGTGTCGCGCGGCTCGCCTGCCCCCGCTCCG 37
consensus_2592#1      TCGAACCCAGGCAAGTAGAAGAACCCCCAAATTCCCCCTTGTCGGCCTATCCCCAC-CCA 59
                                             *** *   *  * *   *   ****  **** * ** 

consensus_2592#0      CCGACCACGGGCGCACCATGGCGCTGCCGCCACCGAC---GCCGGAGG---TCATGGACG 91
consensus_2592#1      AAACCCTCGCGTCCACC-CGCCCCCGCCGCCGACGACCTCGCCAGAGGAGCTCATGGACG 118
                          ** ** *  ****  * * * ******  ****   *** ****   *********

consensus_2592#0      ACCTCACCGCCTCGCTCGCGCCGGAGCTCCTCTCCGAGATCCTCCTCCGCCTCCCGCCGG 151
consensus_2592#1      ACGCCATCGCCGCGCTCCCGCCGGAGCTCGTCTCCGAGATCCTCCTCCGCCTCCGGCCGG 178
                      **  ** **** ***** *********** ************************ *****

consensus_2592#0      ACGAGCCCGAGCAACTCTTCCGCGCTGCCCTAGTCTGCAAGGAATGGCTCCGCGCCATCT 211
consensus_2592#1      ACGAGCCCGAGCACCTCTTCCGCGCGTCACTCGTCTGCAAGGCATGGCTCCGCGCCATCT 238
                      ************* ***********  * ** ********** *****************

consensus_2592#0      GCGACCCCGGCTTCCTCCGCCGCTACCGCGCCTTCCACCGATCCCCTCCCCTGCTCGGCC 271
consensus_2592#1      GCGACCCCGTCTTCCTCCGCCGCTACCGCGCCTTCCACGGATCCCCGCCGCTGCTCGGCC 298
                      ********* **************************** ******* ** **********

consensus_2592#0      TCCTTTAC-GCCGCCAAGTTCTACAGGGAGCCCCCGCCCCCCACCTCGCCCGCACCACCG 330
consensus_2592#1      TCCTCCACAGGCTCCGGGTCATAGACGGGGACCCCGCCCCGCGCCTCGCCCGCACCACGG 358
                      ****  ** * * **  **  ** * ** * ********* * *************** *

consensus_2592#0      CAGTGCCCCTCTCGCCCGATCCCACCTTTCGCCGGGCCCTCGATTGCCGCCATGGCCGTG 390
consensus_2592#1      CGGCGCCCCTCTCCCCCGACCCGGCCTTCCTCCGGGCCCTCGACTGCCGCCATGGCCGCG 418
                      * * ********* ***** **  **** * ************ ************** *

consensus_2592#0      CCCTCCTCCACGCTTCGGACGATGATTGGTATCTCATTGTCTGGGACCCCGTCACCGGCG 450
consensus_2592#1      TCCTCCTCCACGCGTCGAACCTCGGC------CTCATCGTCTGGGACCCCGTCACGGGCG 472
                       ************ *** **   *        ***** ***************** ****

consensus_2592#0      AACAGCACCGCGTGCCAGAGCCCGGCATCCCGTGGCTGATCTACTCCAGCGCTGTGTTCT 510
consensus_2592#1      AGCAGCACCGCCTGCCGGAATCTGGCATCCCGTGGCTGATCTACACCGCCGCAGTGTTCT 532
                      * ********* **** **  * ********************* **  *** *******

consensus_2592#0      GTGCCGTGAGCGGCTGTGACCACCTCGACTGCCACGGCGGTCCCTTCCGAGTGGTCTTTG 570
consensus_2592#1      GCGCCGTCGGCGGCTGTGACCACCTCGACTGCCACGGCGGCCCCTTCCGAGTGGTCTTCG 592
                      * *****  ******************************* ***************** *

consensus_2592#0      TGGCCACCGATGACGGGGCGGATCCAACACCTACACCCACAAAACTCATGGATACCCCGG 630
consensus_2592#1      TGGCCACCGACGACG--------------------------------------------- 607
                      ********** ****                                             

consensus_2592#0      AGCACCCCCTTCGATTTTTTCACTATGAATGAACTAAAAGTCCCTAAATGGCTGGAGGTT 690
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GAAAAAACTGTGTAATTGAGCCTCCCTAATTTTTTGTTTCTGATCCACCCGTGATGAGTA 750
consensus_2592#1      -----------------------------------------------------------A 608
                                                                                 *

consensus_2592#0      CAAAGATCTCGTTAAGGCGAGCATGTACTCATCGGAGACCGGGGCGTGGAGCACCCCGGT 810
consensus_2592#1      CGACGAACTCGTCAAGGGGAGTGTGTATTCATCGGAGACCGGTGTGTGGAGCACGCCAGC 668
                      * * ** ***** **** ***  **** ************** * ********* ** * 

consensus_2592#0      AGTTCTTGATGATGGTCTTGATTCCTGGGAACAGCGATGGCGAGATGCACAGAGTAGAGG 870
consensus_2592#1      AACTCTTGATGATGGCTATCAATCCTGGGAAGAGCGTTGGCAGGCGGCCCGCAGTAGAGG 728
                      *  ************   * * ********* **** ****  *  ** *  ********

consensus_2592#0      TGAATTCTACCGCGTACCTTATGTCATGCCTAGGCGAGTTGCCCTTGTCGGAGATGAAAT 930
consensus_2592#1      CGAATACTACCGCACACCTTATGTCCATCCTAAGCGATGTGCCCTTGTCGGAGATGAAAT 788
                       **** *******  **********   **** ****  *********************

consensus_2592#0      CTACTTCACACTTCGGGAGGATAATGCCATCATCAAGTACAACTGGGGCATGCACTGCTT 990
consensus_2592#1      CTACTTCACACTTCGGAACGGCAATACGATCATCGAGTACAACTGGGGAAAGAACCGCTT 848
                      **************** * *  *** * ****** ************* * * ** ****

consensus_2592#0      ATCTGAAATTGACTCGCCGTCGCCAGACGTGTATGGCATTGCCCTCATGGAGATGGAGAA 1050
consensus_2592#1      ATTTATGTTTGACCCGCCGACATCGGACTTGTACTACATTGCCCTCACGGTGATGGAGAA 908
                      ** *    ***** ***** *  * *** ****   *********** ** *********

consensus_2592#0      CGGTTCACTGGGTTTTGCCTGCATTGAGGATTCCAGCCTTTATGTGTGGTCACGGAAGGT 1110
consensus_2592#1      TGGTTCACTGGGGTTTGCCGGCATTGAGGGATCCAGCCTTAATGTGTGGTCGAGGAAGGT 968
                       *********** ****** *********  ********* **********  *******

consensus_2592#0      GAATTCAGAAGGGGCAGCAGAATGGGTACAATGCAGGGTGATCAAGCTGGACAAAATGAT 1170
consensus_2592#1      GAATCCACAAGGGGCTGCAGAATGGGTACTATGCAGGATCATCGAACTGGAGAAAATTAT 1028
                      **** ** ******* ************* ******* * *** * ***** ***** **

consensus_2592#0      ACCTGTTGCCAATCTCAGTGATGAAGCATTTGTGGTTGGCTCTGGGGAGGGTATGGGTGC 1230
consensus_2592#1      ACCTGTAGTCGATCTCAGTGATGAAGCATGTGTGGTTGGCTCTGCAGAGGGTCTGGGTGT 1088
                      ****** * * ****************** **************  ****** ****** 

consensus_2592#0      CATATTCGTGAGCACAGGTGTTGGCTTGTTCACGATCGAGCTCAAGTCAAGGAGGGTGAA 1290
consensus_2592#1      CATCTTCGTGAGCACAGGCGTTGGCTTATTCACGATCGAGCTCAAGTCAAGGCGGGTGAA 1148
                      *** ************** ******** ************************ *******

consensus_2592#0      GAAGGTTGCAGAGCCTGAGGTCTACTTTAGCATCTTACCCTACATGAGCTTCTACACTCC 1350
consensus_2592#1      GAAGCTTGAAGAGCCTGGTGTCTACTTTAGTGTCTTACCCTACATGAGCTTCTACACTCC 1208
                      **** *** ********  ***********  ****************************

consensus_2592#0      TGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATGTCATGCTCAAG 1410
consensus_2592#1      TGATCGTGGCACATTGTTATCGCTAGCAAGGACTCACTGATCTTTGATCTCATGCTCAAG 1268
                      ************************************************ ***********

consensus_2592#0      AGTAACTTGTTGCAAAATGGACAAATCCATTGTCTTGACTCTTGAATCTGCTGCCACTGA 1470
consensus_2592#1      AGTAACATGTTGCAAAATGGACAAATCCATCGTCT-------TGGATCTGCTGCGATTGA 1321
                      ****** *********************** ****       ** ********* * ***

consensus_2592#0      CTTCTTCCAGAACTACTACTACTACTAAGCTGTTTATTTTTTGTTGGGCAGTACAAGTAC 1530
consensus_2592#1      CATCTTCCAGAGATACTACTATG---AAGTTGTTTATTTTCTGTTGGGCAATGTAGGTAT 1378
                      * *********  ********     *** ********** ********* *  * *** 

consensus_2592#0      GAACAATGCCAAGTCTGATGTTCAAATGTGGTTGTTGTGTCAAATTCATCCTACCGACCA 1590
consensus_2592#1      GAGCAATTCGAGTCATCATGTTCGAATATGGTCATCGTATCAAATTCATC-----AACCA 1433
                      ** **** * *    * ****** *** ****  * ** ***********      ****

consensus_2592#0      TGAACTAGATCAGCAAGTCGTGCTAAGCTGAATAGCTGGCTCCCTATTCTTTATTGTTCG 1650
consensus_2592#1      TGAACTGTAT-------TCGGTTTAACATGTCTGGCATATTTCAGTTACTTTTTGGTTTA 1486
                      ******  **       ***   ***  **  * **    * *   * **** * ***  

consensus_2592#0      TTTTGAGAGCATGGTTTGCGCTTTGGCCTTACAGGAATGGGCCAACTATCGGAATAAGCA 1710
consensus_2592#1      TATTG-GGCTAAGGTACATGAAACAAA--------------------------------- 1512
                      * *** *   * ***    *                                        

consensus_2592#0      TCAACACGCTGATGAGGCCATGAAGGCTCAGGTGATAGTGAAGGGTAAGCAGCCATGAGA 1770
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      AGGGGAAAAGTTAAGATCAAGCCCATTGCAAATAGAAAGGCTCGTGATGTATGCTTCTCC 1830
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      AAGCGCCGCCAGGTTGTAATCAAGAAGGCTAACGAACTCAGCATATTATGTGGTGTCAAT 1890
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GTTGCTGTTGCTGTGCTCTCACCTGCTGGTAAGCCCTTTTTCTTTGGCTGCCCTACTGTT 1950
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      CAAGCTGTCACTCGTCGCTTACTTGGTGTGGGTCCTAGTAACCCTACCATGGGTGATGGG 2010
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GGCAATGGTGATGAGACTGACATAGTGCATGAGCTCAATCTGAAGTACCAGAAGTTGCAA 2070
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      CAAGAGAATGAAGTGGAGAAGAAGAAAAACCAGCGTGGTCAGGATGTGAGGCTAGCTAGT 2130
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GATGTAAATGCATTGGGGCTGCATGAGTTGGAGGCATTCGACAGTAACCTCAATGTAATA 2190
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GATGACATTGTCGATTCAAATGATGTGGTTAAGAATGCCAAGCAAACAGCTGAGCCCCAG 2250
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      ACTCAGATGAGCGTGGCA 2268
consensus_2592#1      ------------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)