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Oryza sativa
cluster # 2621 cluster # 2621       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2621#0 length = 1790 sequences # 2  

consensusID : consensus_2621#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1790
fasta sequence
                              [CTCCTCTTCCTCCCCTCTCAATCCCCAATTCCTCCTCCTCCCGAGGCAATCCGCGAGGCTGCGCGTCCTCCTATCCATCCCGGTCTCCGCCATGAGCTCCTCGTCGTCGTCGTCGTCGCGGGGCGCGCTGGCGGCGGCGGCGGTGCCTTCCCTCTCCGCCGACGAGGCCGGCGCGGCGGCGGACGAGGCGTTCTTGAGGTACACCTCGCCGAGCATGCGGCGGAGCGGCGGCGGCGGGGTTGCCATCGTGTGGTTCAGGAACGACCTCCGGGTGCTCGACAACGAGGCGGTGGTGCGCGCGTGGGCCGCCTCCGATGCCGTCCTCCCCGTCTACTGCGTCGATCCCCGGATCTCCGCGGGGAGCACCCACTACTTCGGTTTCCCCAAGACTGGAGCATTGAGGGCGCAATTCCTGATAGAGTGCTTGGAGGATTTGAAGCGCAACCTGACGAAACAAGGTCTCGACCTGCTCATCCGCCATGGGAAACCTGAAGACATCCTCCCTTCAATTGCAAAGGCTGTCACTGCACATACGGTCTATGCTCATAAGGAAACCTGCAGCGAGGAACTCCTGGTTGAACACCTTGTGCGCAAAGGCTTGGAGCAAGTTGTGATTCCTCAGGGAGGAGCATCTAACCAGAAGAAGCCTCGAAATCCCAAGTTGCAGCTCATCTGGGGAGCGACATTGTACCATGTCGATGATCTTCCATTCTCCGTGAACAATTTGCCTGACGTATATACACAGTTCAGAAAGGCTGTTGAATCTAAGTCCTCAGTTCGGAATTGTAGCAAGTTGCCACCGTCACTCGGGCCGCCTCCTGGTTCTGGCCTGGATGAAATTGGAGGTTGGGGAACAGTACCAACACTGGAGTCACTAGGCCTAAGCATGACAAAGTCAGAGAAGGGAATGCATTTCGTGGGAGGGGAGAGTGCAGCTCTGGGAAGAGTTCATGAGTACTTCTGGAAGAAAGACCAGCTGAAAGTCTACAAAGAGACCAGGAATGGCATGCTAGGTCCAGACTACTCCACCAAGTTCTCCCCTTGGCTTGCTTCTGGCAGTCTTTCGCCTCGTTATATTTGTGAAGAGGTAAAGAGATATGAGAAGCAGAGAATAGCAAATGATTCTACATACTGGGTTTTATTTGAGTTGATATGGAGAGATTACTTCCGGTTCATATCAGCAAAATATGGGAACTCCATTTTTCACCTAGGGGGTCCAAGGAACGTAGAGTCCAAGTGGAGCCAGGATCAGGCACTGTTTGAATCTTGGAGAGATGGTCGAACTGGGTACCCTCTTATTGACGCCAACATGAAGGAGCTTTTAGCGACAGGTTTCATGTCCAACCGTGGCCGTCAGATTGTCTGCTCATTTCTGGTCCGAGATATGGGTATTGATTGGCGAATGGGAGCTGAATGGTTTGAAACATGCCTATTGGATTATGACCCAGCTTCAAATTATGGTAATTGGACATATGGAGCAGGAGTTGGCAATGATCCAAGAGAAGACCGATACTTCAGTATACCTAAGCAAGCCAAGACATATGATCCTGATGGAGAGTATGTTGCCTACTGGTTGCCAGAGCTCCGATCAATTGCAAAGGAAAGAAGGAATTTCCCAGGAGCTTCATACATCAAGCAGGTTGTCCCACTGAAATTTGATGGTGGACATCAGAAGAGAGATCAGCAGTTCAACAGGCAGAGAAGGCCAGGCCACATGTATAGAAGACAAAAATAATAAGATGCATATATGTATTTATTATAATTTACACCATATATCAATACGAAGTGAA]

[+] EMBL AK102315             [CTCCTCTTCCTCCCCTCTCAATCCCCAATTCCTCCTCCTCCCGAGGCAATCCGCGAGGCTGCGCGTCCTCCTATCCATCCCGGTCTCCGCCATGAGCTCCTCGTCGTCGTCGTCGTCGCGGGGCGCGCTGGCGGCGGCGGCGGTGCCTTCCCTCTCCGCCGACGAGGCCGGCGCGGCGGCGGACGAGGCGTTCTTGAGGTACACCTCGCCGAGCATGCGGCGGAGCGGCGGCGGCGGGGTTGCCATCGTGTGGTTCAGGAACGACCTCCGGGTGCTCGACAACGAGGCGGTGGTGCGCGCGTGGGCCGCCTCCGATGCCGTCCTCCCCGTCTACTGCGTCGATCCCCGGATCTCCGCGGGGAGCACCCACTACTTCGGTTTCCCCAAGACTGGAGCATTGAGGGCGCAATTCCTGATAGAGTGCTTGGAGGATTTGAAGCGCAACCTGACGAAACAAGGTCTCGACCTGCTCATCCGCCATGGGAAACCTGAAGACATCCTCCCTTCAATTGCAAAGGCTGTCACTGCACATACGGTCTATGCTCATAAGGAAACCTGCAGCGAGGAACTCCTGGTTGAACACCTTGTGCGCAAAGGCTTGGAGCAAGTTGTGATTCCTCAGGGAGGAGCATCTAACCAGAAGAAGCCTCGAAATCCCAAGTTGCAGCTCATCTGGGGAGCGACATTGTACCATGTCGATGATCTTCCATTCTCCGTGAACAATTTGCCTGACGTATATACACAGTTCAGAAAGGCTGTTGAATCTAAGTCCTCAGTTCGGAATTGTAGCAAGTTGCCACCGTCACTCGGGCCGCCTCCTGGTTCTGGCCTGGATGAAATTGGAGGTTGGGGAACAGTACCAACACTGGAGTCACTAGGCCTAAGCATGACAAAGTCAGAGAAGGGAATGCATTTCGTGGGAGGGGAGAGTGCAGCTCTGGGAAGAGTTCATGAGTACTTCTGGAAGAAAGACCAGCTGAAAGTCTACAAAGAGACCAGGAATGGCATGCTAGGTCCAGACTACTCCACCAAGTTCTCCCCTTGGCTTGCTTCTGGCAGTCTTTCGCCTCGTTATATTTGTGAAGAGGTAAAGAGATATGAGAAGCAGAGAATAGCAAATGATTCTACATACTGGGTTTTATTTGAGTTGATATGGAGAGATTACTTCCGGTTCATATCAGCAAAATATGGGAACTCCATTTTTCACCTAGGGGGTCCAAGGAACGTAGAGTCCAAGTGGAGCCAGGATCAGGCACTGTTTGAATCTTGGAGAGATGGTCGAACTGGGTACCCTCTTATTGACGCCAACATGAAGGAGCTTTTAGCGACAGGTTTCATGTCCAACCGTGGCCGTCAGATTGTCTGCTCATTTCTGGTCCGAGATATGGGTATTGATTGGCGAATGGGAGCTGAATGGTTTGAAACATGCCTATTGGATTATGACCCAGCTTCAAATTATGGTAATTGGACATATGGAGCAGGAGTTGGCAATGATCCAAGAGAAGACCGATACTTCAGTATACCTAAGCAAGCCAAGACATATGATCCTGATGGAGAGTATGTTGCCTACTGGTTGCCAGAGCTCCGATCAATTGCAAAGGAAAGAAGGAATTTCCCAGGAGCTTCATACATCAAGCAGGTTGTCCCACTGAAATTTGATGGTGGACATCAGAAGAGAGATCAGCAGTTCAACAGGCAGAGAAGGCCAGGCCACATGTATAGAAGACAAAAATAATAAGATGCATATATGTATTTATTATAATTTACACCATATATCAATACGAAGTGAA]
[+] EMBL AK072287             [                                                  CCGCGAGGCTGCGCGTCCTCCTATCCATCCCGGTCTCCGCCATGAGCTCCTCGTCGTCGTCGTCGTCGCGGGGCGCGCTGGCGGCGGCGGCGGTGCCTTCCCTCTCCGCCGACGAGGCCGGCGCGGCGGCGGACGAGGCGTTCTTGAGGTACACCTCGCCGAGCATGCGGCGGAGCGGCGGCGGCGGGGTTGCCATCGTGTGGTTCAGGAACGACCTCCGGGTGCTCGACAACGAGGCGGTGGTGCGCGCGTGGGCCGCCTCCGATGCCGTCCTCCCCGTCTACTGCGTCGATCCCCGGATCTCCGCGGGGAGCACCCACTACTTCGGTTTCCCCAAGACTGGAGCATTGAGGGCGCAATTCCTGATAGAGTGCTTGGAGGATTTGAAGCGCAACCTGACGAAACAAGGTCTCGACCTGCTCATCCGCCATGGGAAACCTGAAGACATCCTCCCTTCAATTGCAAAGGCTGTCACTGCACATACGGTCTATGCTCATAAGGAAACCTGCAGCGAGGAACTCCTGGTTGAACACCTTGTGCGCAAAGGCTTGGAGCAAGTTGTGATTCCTCAGGGAGGAGCATCTAACCAGAAGAAGCCTCGAAATCCCAAGTTGCAGCTCATCTGGGGAGCGACATTGTACCATGTCGATGATCTTCCATTCTCCGTGAACAATTTGCCTGACGTATATACACAGTTCAGAAAGGCTGTTGAATCTAAGTCCTCAGTTCGGAATTGTAGCAAGTTGCCACCGTCACTCGGGCCGCCTCCTGGTTCTGGCCTGGATGAAATTGGAGGTTGGGGAACAGTACCAACACTGGAGTCACTAGGCCTAAGCATGACAAAGTCAGAGAAGGGAATGCATTTCGTGGGAGGGGAGAGTGCAGCTCTGGGAAGAGTTCATGAGTACTTCTGGAAGAAAGACCAGCTGAAAGTCTACAAAGAGACCAGGAATGGCATGCTAGGTCCAGACTACTCCACCAAGTTCTCCCCTTGGCTTGCTTCTGGCAGTCTTTCGCCTCGTTATATTTGTGAAGAGGTAAAGAGATATGAGAAGCAGAGAATAGCAAATGATTCTACATACTGGGTTTTATTTGAGTTGATATGGAGAGATTACTTCCGGTTCATATCAGCAAAATATGGGAACTCCATTTTTCACCTAGGGGGTCCAAGGAACGTAGAGTCCAAGTGGAGCCAGGATCAGGCACTGTTTGAATCTTGGAGAGATGGTCGAACTGGGTACCCTCTTATTGACGCCAACATGAAGGAGCTTTTAGCGACAGGTTTCATGTCCAACCGTGGCCGTCAGATTGTCTGCTCATTTCTGGTCCGAGATATGGGTATTGATTGGCGAATGGGAGCTGAATGGTTTGAAACATGCCTATTGGATTATGACCCAGCTTCAAATTATGGTAATTGGACATATGGAGCAGGAGTTGGCAATGATCCAAGAGAAGACCGATACTTCAGTATACCTAAGCAAGCCAAGACATATGATCCTGATGGAGAGTATGTTGCCTACTGGTTGCCAGAGCTCCGATCAATTGCAAAGGAAAGAAGGAATTTCCCAGGAGCTTCATACATCAAGCAGGTTGTCCCACTGAAATTTGATGGTGGACATCAGAAGAGAGATCAGCAGTTCAACAGGCAGAGAAGGCCAGGCCACATGTATAGAAGACAAAAATAATAAGATGCATATATGTATTTATTATAATTTACACCATATATCAATACGAAGTGAA]


>consensus_2621#0 CTCCTCTTCCTCCCCTCTCAATCCCCAATTCCTCCTCCTCCCGAGGCAATCCGCGAGGCT GCGCGTCCTCCTATCCATCCCGGTCTCCGCCATGAGCTCCTCGTCGTCGTCGTCGTCGCG GGGCGCGCTGGCGGCGGCGGCGGTGCCTTCCCTCTCCGCCGACGAGGCCGGCGCGGCGGC GGACGAGGCGTTCTTGAGGTACACCTCGCCGAGCATGCGGCGGAGCGGCGGCGGCGGGGT TGCCATCGTGTGGTTCAGGAACGACCTCCGGGTGCTCGACAACGAGGCGGTGGTGCGCGC GTGGGCCGCCTCCGATGCCGTCCTCCCCGTCTACTGCGTCGATCCCCGGATCTCCGCGGG GAGCACCCACTACTTCGGTTTCCCCAAGACTGGAGCATTGAGGGCGCAATTCCTGATAGA GTGCTTGGAGGATTTGAAGCGCAACCTGACGAAACAAGGTCTCGACCTGCTCATCCGCCA TGGGAAACCTGAAGACATCCTCCCTTCAATTGCAAAGGCTGTCACTGCACATACGGTCTA TGCTCATAAGGAAACCTGCAGCGAGGAACTCCTGGTTGAACACCTTGTGCGCAAAGGCTT GGAGCAAGTTGTGATTCCTCAGGGAGGAGCATCTAACCAGAAGAAGCCTCGAAATCCCAA GTTGCAGCTCATCTGGGGAGCGACATTGTACCATGTCGATGATCTTCCATTCTCCGTGAA CAATTTGCCTGACGTATATACACAGTTCAGAAAGGCTGTTGAATCTAAGTCCTCAGTTCG GAATTGTAGCAAGTTGCCACCGTCACTCGGGCCGCCTCCTGGTTCTGGCCTGGATGAAAT TGGAGGTTGGGGAACAGTACCAACACTGGAGTCACTAGGCCTAAGCATGACAAAGTCAGA GAAGGGAATGCATTTCGTGGGAGGGGAGAGTGCAGCTCTGGGAAGAGTTCATGAGTACTT CTGGAAGAAAGACCAGCTGAAAGTCTACAAAGAGACCAGGAATGGCATGCTAGGTCCAGA CTACTCCACCAAGTTCTCCCCTTGGCTTGCTTCTGGCAGTCTTTCGCCTCGTTATATTTG TGAAGAGGTAAAGAGATATGAGAAGCAGAGAATAGCAAATGATTCTACATACTGGGTTTT ATTTGAGTTGATATGGAGAGATTACTTCCGGTTCATATCAGCAAAATATGGGAACTCCAT TTTTCACCTAGGGGGTCCAAGGAACGTAGAGTCCAAGTGGAGCCAGGATCAGGCACTGTT TGAATCTTGGAGAGATGGTCGAACTGGGTACCCTCTTATTGACGCCAACATGAAGGAGCT TTTAGCGACAGGTTTCATGTCCAACCGTGGCCGTCAGATTGTCTGCTCATTTCTGGTCCG AGATATGGGTATTGATTGGCGAATGGGAGCTGAATGGTTTGAAACATGCCTATTGGATTA TGACCCAGCTTCAAATTATGGTAATTGGACATATGGAGCAGGAGTTGGCAATGATCCAAG AGAAGACCGATACTTCAGTATACCTAAGCAAGCCAAGACATATGATCCTGATGGAGAGTA TGTTGCCTACTGGTTGCCAGAGCTCCGATCAATTGCAAAGGAAAGAAGGAATTTCCCAGG AGCTTCATACATCAAGCAGGTTGTCCCACTGAAATTTGATGGTGGACATCAGAAGAGAGA TCAGCAGTTCAACAGGCAGAGAAGGCCAGGCCACATGTATAGAAGACAAAAATAATAAGA TGCATATATGTATTTATTATAATTTACACCATATATCAATACGAAGTGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)