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Oryza sativa
cluster # 2626 cluster # 2626       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2626#0 length = 2530 sequences # 2  

consensusID : consensus_2626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2530
fasta sequence
                              [ACTTCCTTTGGATGATTTTATCTGCAAAGTGGTTACAGAGTTCAACTCTTCGCTAAGATGGGCTCACCTGTGCAAAGATTAGAGAGGAGGAGCCCTTCTTGAGCTCAGAGGTGCAGTGCAGGCTTGCAGCGGAGTTGTTCACTTGTAGGCTCCTTCCTTAACCTGCTCAATGTATCATAGCCGCTCCAAGAGATAGGATCAGTTCTTGGCTAATGCCTAATGATCTTGACGAATTTGCATCGGCAGCGACTCTGTTAGAATGCTCAGAATGGATGGCACGGATTTGTCTTCCCCAAGGTGCAATGTTCAGCATCTACAGAATGCCGAAGAACTGAAGGATCAGAATAGCACCAATAAGAGGCTGCCCCGGACTACAGAGCTCCCATGCTCTTTGATACAAGAGGTCCAACACCTTGAGAAGCGACTAAATGATCAATTTGCTATGCGGCGTGCTTTGGAGAAAGCATTAGGTTATAAGCCTTGTGCCATTCATTCATCCAATGAGAGCTGCATTCCAAAGCCTACTGAGGAACTAATAAAGGAGATTGCTGTGCTGGAGCTAGAGGTCATATGCTTGGAGCAACATCTCCTAGCACTCTACCGGAAGGCCTTTGATCAACAAATTTGCAGCGTGTCTTCTTCCTGTGACATGGAAATCAACAAGCAGTCAGCAAGGTCATTCTCAGGTATACTCACAGGATCTTCAGAACTGGATTTCTCAACCCCAAGGAAACACCAACTCCTGCAGTCCAGTGGCATGGTCATGGCACGCAAGTCTACACCGACAACTCTCACTAGCGAAACCAGAACTTCACATTACAATGACAAGACTGGTATCGGACGCAGCCATTCCTCGCTCCTGCAGCGTTCCATTTGTTCAGCCAGAGTATCTCCTTCAGCAAACAATCTTGCTAGGGCTCTCAAACCATGCCATACTTTGCCTCTATCCTTTGTCGAGGAGGGCAAGTGCATGGATCCTGGTATTGTGAGCCTGGCGGATATCCTAGGGACCAGGATAGCAGATCATGTTCCTCAAACACCGAACAAAATATCTGAGGACATGATCAAATGCATTGCTTCGATATACATAAGGATTAGGGACTTCAATGCCGTGCAACATCCCTTCTTCCCCTCACCATGCTCATCATTTTCATCAGCGAGCGGGCTCTCTTCCAAATACACTGGGGATATATGGAGCCCAAGATGTAGGAAAGAGGGCTATATTGAGGCCTGGCAAGACGATGCGTTAGGAACTGGCGAATCAAGATACTTCAGTCAACAATATGATTCTGTGATTGAGGTGTCTGCTCTTTGCAAGGGGGCCCAGAGGTCTGCTGATGTTAAAGACATGCTACACAAATACAAGTCTCTTGTACAGCTGCTAGAAAGTGCTGATCTCAACGGAATGAAAAATGAAGAAAAAATTGCTTTCTGGATCAATGTGCACAATGCCATGATGATGCATGCCCATATAGAATACGGGATTCCGCAAAGTAACAGCAAGAGAATATTGCTTACTAAGTTATCTTACCTCATCAGTGGCCAGAGAGTAAACCCGGAGTTGATAGAGTACCATATCCTATGCTGCCGAGTGCACTCTCCTACACAGTGGCTGAGACTACTCCTGTACCCGAAATGGAAGTCCAAGGAGAAGGAAGACCTGCAGGGGTTCGCCGTCGACAGGCCGGAGCCGCTGGTGCACTTCGCGCTGTCGTCGGGGAGCCACTCCGACCCGGTGGTGCGGTTGTACCGGCCGGAGCGCCTCCTCCAGCAGCTGGAGGCGGCGAGGGACGAGTTCGTCCGCGCCAACGTCGGCGTCCGCGGGGGGCGGCGCGGGCGCGGGCGCCGGGTGCTCCTCCTCCTCCCGAAGCTCCTCGAGCCGTACTCGAGGGACGCCGGCCTCGGTGCGCACGACCTCCTCCGCGCGGTGGAGTCCTGCCTCCCGGAGCCGCTCCGGCCGGCGGCGCAGCAGGCGGCGCGGTCGCGCGGCGGCGGCGGCGGCGTCGAGTGGAGGCCCCACAACCCGGCCTTCCGCTACCTGCTCGCGCGGGAGCTCGTGGGCCCACCCGCGCCAACGGCCCACCTATCCTCCACGTAAAGTTTCACGGCCCAATGTACAGAGCCTTGTAAAGTTGATATTTTGGGCCCGGCCCAACAAACTTGGAAAGTTAGTTATCTGGGCCTGAAAAGAGGCCGTGGCTTTTGGCCCATGTTTGTGGAACGTTCTACCTGCTTGGTCTCTCGGATGGCACGAACGGACGACGATTTCCGTCTTGGTGGACAAGAAAGAAAGTGGAACGTTTTTGACTTGGATTCTTAAACCCGCCAATGGTTTTCCACGCGCCCACGTTATTGAGGGGTGTTTAGATCTCACATCAAATATTATATAGGTTATCGCAGGGTGTTCAGACACTAATATAAAAAACTAACTACAGTATCTGTCAGTAAACCGCAAGACGGATTTATTAAGCCTAATTAATCTATCATTAGCGTATATTTACTGTAGCAATACATTGTCAAATCATGGAGC]

[+] EMBL AK072396             [ACTTCCTTTGGATGATTTTATCTGCAAAGTGGTTACAGAGTTCAACTCTTCGCTAAGATGGGCTCACCTGTGCAAAGATTAGAGAGGAGGAGCCCTTCTTGAGCTCAGAGGTGCAGTGCAGGCTTGCAGCGGAGTTGTTCACTTGTAGGCTCCTTCCTTAACCTGCTCAATGTATCATAGCCGCTCCAAGAGATAGGATCAGTTCTTGGCTAATGCCTAATGATCTTGACGAATTTGCATCGGCAGCGACTCTGTTAGAATGCTCAGAATGGATGGCACGGATTTGTCTTCCCCAAGGTGCAATGTTCAGCATCTACAGAATGCCGAAGAACTGAAGGATCAGAATAGCACCAATAAGAGGCTGCCCCGGACTACAGAGCTCCCATGCTCTTTGATACAAGAGGTCCAACACCTTGAGAAGCGACTAAATGATCAATTTGCTATGCGGCGTGCTTTGGAGAAAGCATTAGGTTATAAGCCTTGTGCCATTCATTCATCCAATGAGAGCTGCATTCCAAAGCCTACTGAGGAACTAATAAAGGAGATTGCTGTGCTGGAGCTAGAGGTCATATGCTTGGAGCAACATCTCCTAGCACTCTACCGGAAGGCCTTTGATCAACAAATTTGCAGCGTGTCTTCTTCCTGTGACATGGAAATCAACAAGCAGTCAGCAAGGTCATTCTCAGGTATACTCACAGGATCTTCAGAACTGGATTTCTCAACCCCAAGGAAACACCAACTCCTGCAGTCCAGTGGCATGGTCATGGCACGCAAGTCTACACCGACAACTCTCACTAGCGAAACCAGAACTTCACATTACAATGACAAGACTGGTATCGGACGCAGCCATTCCTCGCTCCTGCAGCGTTCCATTTGTTCAGCCAGAGTATCTCCTTCAGCAAACAATCTTGCTAGGGCTCTCAAACCATGCCATACTTTGCCTCTATCCTTTGTCGAGGAGGGCAAGTGCATGGATCCTGGTATTGTGAGCCTGGCGGATATCCTAGGGACCAGGATAGCAGATCATGTTCCTCAAACACCGAACAAAATATCTGAGGACATGATCAAATGCATTGCTTCGATATACATAAGGATTAGGGACTTCAATGCCGTGCAACATCCCTTCTTCCCCTCACCATGCTCATCATTTTCATCAGCGAGCGGGCTCTCTTCCAAATACACTGGGGATATATGGAGCCCAAGATGTAGGAAAGAGGGCTATATTGAGGCCTGGCAAGACGATGCGTTAGGAACTGGCGAATCAAGATACTTCAGTCAACAATATGATTCTGTGATTGAGGTGTCTGCTCTTTGCAAGGGGGCCCAGAGGTCTGCTGATGTTAAAGACATGCTACACAAATACAAGTCTCTTGTACAGCTGCTAGAAAGTGCTGATCTCAACGGAATGAAAAATGAAGAAAAAATTGCTTTCTGGATCAATGTGCACAATGCCATGATGATGCATGCCCATATAGAATACGGGATTCCGCAAAGTAACAGCAAGAGAATATTGCTTACTAAGTTATCTTACCTCATCAGTGGCCAGAGAGTAAACCCGGAGTTGATAGAGTACCATATCCTATGCTGCCGAGTGCACTCTCCTACACAGTGGCTGAGACTACTCCTGTACCCGAAATGGAAGTCCAAGGAGAAGGAAGACCTGCAGGGGTTCGCCGTCGACAGGCCGGAGCCGCTGGTGCACTTCGCGCTGTCGTCGGGGAGCCACTCCGACCCGGTGGTGCGGTTGTACCGGCCGGAGCGCCTCCTCCAGCAGCTGGAGGCGGCGAGGGACGAGTTCGTCCGCGCCAACGTCGGCGTCCGCGGGGGGCGGCGCGGGCGCGGGCGCCGGGTGCTCCTCCTCCTCCCGAAGCTCCTCGAGCCGTACTCGAGGGACGCCGGCCTCGGTGCGCACGACCTCCTCCGCGCGGTGGAGTCCTGCCTCCCGGAGCCGCTCCGGCCGGCGGCGCAGCAGGCGGCGCGGTCGCGCGGCGGCGGCGGCGGCGTCGAGTGGAGGCCCCACAACCCGGCCTTCCGCTACCTGCTCGCGCGGGAGCTCGTGGGCCCACCCGCGCCAACGGCCCACCTATCCTCCACGTAAAGTTTCACGGCCCAATGTACAGAGCCTTGTAAAGTTGATATTTTGGGCCCGGCCCAACAAACTTGGAAAGTTAGTTATCTGGGCCTGAAAAGAGGCCGTGGCTTTT                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK108855             [                                                                                                                                        GTTCACTTGTAGGCTCCTTCCTTAACCTGCTCAATGTATCATAGCCGCTCCAAGAGATAGGATCAGTTCTTGGCTAATGCCTAATGATCTTGACGAATTTGCATCGGCAGCGACTCTGTTAGAATGCTCAGAATGGATGGCACGGATTTGTCTTCCCCAAGGTGCAATGTTCAGCATCTACAGAATGCCGAAGAACTGAAGGATCAGAATAGCACCAATAAGAGGCTGCCCCGGACTACAGAGCTCCCATGCTCTTTGATACAAGAGGTCCAACACCTTGAGAAGCGACTAAATGATCAATTTGCTATGCGGCGTGCTTTGGAGAAAGCATTAGGTTATAAGCCTTGTGCCATTCATTCATCCAATGAGAGCTGCATTCCAAAGCCTACTGAGGAACTAATAAAGGAGATTGCTGTGCTGGAGCTAGAGGTCATATGCTTGGAGCAACATCTCCTAGCACTCTACCGGAAGGCCTTTGATCAACAAATTTGCAGCGTGTCTTCTTCCTGTGACATGGAAATCAACAAGCAGTCAGCAAGGTCATTCTCAGGTATACTCACAGGATCTTCAGAACTGGATTTCTCAACCCCAAGGAAACACCAACTCCTGCAGTCCAGTGGCATGGTCATGGCACGCAAGTCTACACCGACAACTCTCACTAGCGAAACCAGAACTTCACATTACAATGACAAGACTGGTATCGGACGCAGCCATTCCTCGCTCCTGCAGCGTTCCATTTGTTCAGCCAGAGTATCTCCTTCAGCAAACAATCTTGCTAGGGCTCTCAAACCATGCCATACTTTGCCTCTATCCTTTGTCGAGGAGGGCAAGTGCATGGATCCTGGTATTGTGAGCCTGGCGGATATCCTAGGGACCAGGATAGCAGATCATGTTCCTCAAACACCGAACAAAATAACTGAGGACATGATCAAATGCATTGCTTCGATATACATAAGGATTAGGGACTTCAATGCCGTGCAACATCCCTTCTTCCCCTCACCATGCTCATCATTTTCATCAGCGAGCGGGCTCTCTTCCAAATACACTGGGGATATATGGAGCCCAAGATGTAGGAAAGAGGGCTATATTGAGGCCTGGCAAGACGATGCGTCAGGAACTGGCGAATCAAGATACTTCAGTCAACAATATGATTCTGTGATTGAGGTGTCTGCTCTTTGCAAGGGGGCCCAGAGGTCTGCTGATGTTAAAGACATGCTACACAAATACAAGTCTCTTGTACAGCTGCTAGAAAGTGCTGATCTCAACGGAATGAAAAATGAAGAAAAAATTGCTTTCTGGATCAATGTGCACAATGCCATGATGATGCATGCCCATATAGAATACGGGATTCCGCAAAGTAACAGCAAGAGAATATTGCTTACTAAGTTATCTTACCTCATCAGTGGCCAGAGAGTAAACCCGGAGTTGATAGAGTACCATATCCTATGCTGCCGAGTGCACTCTCCTACACAGTGGCTGAGACTACTCCTGTACCCGAAATGGAAGTCCAAGGAGAAGGAAGACCTGCAGGGGTTCGCCGTCGACAGGCCGGAGCCGCTGGTGCACTTCGCGCTGTCGTCGGGGAGCCACTCCGACCCGGTGGTGCGGTTGTACCGGCCGGAGCGCCTCCTCCAGCAGCTGGAGGCGGCGAGGGACGAGTTCGTCCGCGCCAACGTCGGCGTCCGCGGGGGGCGGCGCGGGCGCGGGCGCCGGGTGCTCCTCCTCCTCCCGAAGCTCCTCGAGCCGTACTCGAGGGACGCCGGCCTCGGTGCGCACGACCTCCTCCGCGCGGTGGAGTCCTGCCTCCCGGAGCCGCTCCGGCCGGCGGCGCAGCAGGCGGCGCGGTCGCGCGGCGGCGGCGGCGGCGTCGAGTGGAGGCCCCACAACCCGGCCTTCCGCTACCTGCTCGCGCGGGAGCTCGTGGGCCCACCCGCGCCAACGGCCCACCTATCCTCCACGTAAAGTTTCACGGCCCAATGTACAGAGCCTTGTAAAGTTGATATTTTGGGCCCGGCCCAACAAACTTGGAAAGTTAGTTATCTGGGCCTGAAAAGAGGCCGTGGCTTTTGGCCCATGTTTGTGGAACGTTCTACCTGCTTGGTCTCTCGGATGGCACGAACGGACGACGATTTCCGTCTTGGTGGACAAGAAAGAAAGTGGAACGTTTTTGACTTGGATTCTTAAACCCGCCAATGGTTTTCCACGCGCCCACGTTATTGAGGGGTGTTTAGATCTCACATCAAATATTATATAGGTTATCGCAGGGTGTTCAGACACTAATATAAAAAACTAACTACAGTATCTGTCAGTAAACCGCAAGACGGATTTATTAAGCCTAATTAATCTATCATTAGCGTATATTTACTGTAGCAATACATTGTCAAATCATGGAGC]


>consensus_2626#0 ACTTCCTTTGGATGATTTTATCTGCAAAGTGGTTACAGAGTTCAACTCTTCGCTAAGATG GGCTCACCTGTGCAAAGATTAGAGAGGAGGAGCCCTTCTTGAGCTCAGAGGTGCAGTGCA GGCTTGCAGCGGAGTTGTTCACTTGTAGGCTCCTTCCTTAACCTGCTCAATGTATCATAG CCGCTCCAAGAGATAGGATCAGTTCTTGGCTAATGCCTAATGATCTTGACGAATTTGCAT CGGCAGCGACTCTGTTAGAATGCTCAGAATGGATGGCACGGATTTGTCTTCCCCAAGGTG CAATGTTCAGCATCTACAGAATGCCGAAGAACTGAAGGATCAGAATAGCACCAATAAGAG GCTGCCCCGGACTACAGAGCTCCCATGCTCTTTGATACAAGAGGTCCAACACCTTGAGAA GCGACTAAATGATCAATTTGCTATGCGGCGTGCTTTGGAGAAAGCATTAGGTTATAAGCC TTGTGCCATTCATTCATCCAATGAGAGCTGCATTCCAAAGCCTACTGAGGAACTAATAAA GGAGATTGCTGTGCTGGAGCTAGAGGTCATATGCTTGGAGCAACATCTCCTAGCACTCTA CCGGAAGGCCTTTGATCAACAAATTTGCAGCGTGTCTTCTTCCTGTGACATGGAAATCAA CAAGCAGTCAGCAAGGTCATTCTCAGGTATACTCACAGGATCTTCAGAACTGGATTTCTC AACCCCAAGGAAACACCAACTCCTGCAGTCCAGTGGCATGGTCATGGCACGCAAGTCTAC ACCGACAACTCTCACTAGCGAAACCAGAACTTCACATTACAATGACAAGACTGGTATCGG ACGCAGCCATTCCTCGCTCCTGCAGCGTTCCATTTGTTCAGCCAGAGTATCTCCTTCAGC AAACAATCTTGCTAGGGCTCTCAAACCATGCCATACTTTGCCTCTATCCTTTGTCGAGGA GGGCAAGTGCATGGATCCTGGTATTGTGAGCCTGGCGGATATCCTAGGGACCAGGATAGC AGATCATGTTCCTCAAACACCGAACAAAATATCTGAGGACATGATCAAATGCATTGCTTC GATATACATAAGGATTAGGGACTTCAATGCCGTGCAACATCCCTTCTTCCCCTCACCATG CTCATCATTTTCATCAGCGAGCGGGCTCTCTTCCAAATACACTGGGGATATATGGAGCCC AAGATGTAGGAAAGAGGGCTATATTGAGGCCTGGCAAGACGATGCGTTAGGAACTGGCGA ATCAAGATACTTCAGTCAACAATATGATTCTGTGATTGAGGTGTCTGCTCTTTGCAAGGG GGCCCAGAGGTCTGCTGATGTTAAAGACATGCTACACAAATACAAGTCTCTTGTACAGCT GCTAGAAAGTGCTGATCTCAACGGAATGAAAAATGAAGAAAAAATTGCTTTCTGGATCAA TGTGCACAATGCCATGATGATGCATGCCCATATAGAATACGGGATTCCGCAAAGTAACAG CAAGAGAATATTGCTTACTAAGTTATCTTACCTCATCAGTGGCCAGAGAGTAAACCCGGA GTTGATAGAGTACCATATCCTATGCTGCCGAGTGCACTCTCCTACACAGTGGCTGAGACT ACTCCTGTACCCGAAATGGAAGTCCAAGGAGAAGGAAGACCTGCAGGGGTTCGCCGTCGA CAGGCCGGAGCCGCTGGTGCACTTCGCGCTGTCGTCGGGGAGCCACTCCGACCCGGTGGT GCGGTTGTACCGGCCGGAGCGCCTCCTCCAGCAGCTGGAGGCGGCGAGGGACGAGTTCGT CCGCGCCAACGTCGGCGTCCGCGGGGGGCGGCGCGGGCGCGGGCGCCGGGTGCTCCTCCT CCTCCCGAAGCTCCTCGAGCCGTACTCGAGGGACGCCGGCCTCGGTGCGCACGACCTCCT CCGCGCGGTGGAGTCCTGCCTCCCGGAGCCGCTCCGGCCGGCGGCGCAGCAGGCGGCGCG GTCGCGCGGCGGCGGCGGCGGCGTCGAGTGGAGGCCCCACAACCCGGCCTTCCGCTACCT GCTCGCGCGGGAGCTCGTGGGCCCACCCGCGCCAACGGCCCACCTATCCTCCACGTAAAG TTTCACGGCCCAATGTACAGAGCCTTGTAAAGTTGATATTTTGGGCCCGGCCCAACAAAC TTGGAAAGTTAGTTATCTGGGCCTGAAAAGAGGCCGTGGCTTTTGGCCCATGTTTGTGGA ACGTTCTACCTGCTTGGTCTCTCGGATGGCACGAACGGACGACGATTTCCGTCTTGGTGG ACAAGAAAGAAAGTGGAACGTTTTTGACTTGGATTCTTAAACCCGCCAATGGTTTTCCAC GCGCCCACGTTATTGAGGGGTGTTTAGATCTCACATCAAATATTATATAGGTTATCGCAG GGTGTTCAGACACTAATATAAAAAACTAACTACAGTATCTGTCAGTAAACCGCAAGACGG ATTTATTAAGCCTAATTAATCTATCATTAGCGTATATTTACTGTAGCAATACATTGTCAA ATCATGGAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)