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Oryza sativa
cluster # 2656 cluster # 2656       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2656#0 length = 2191 sequences # 2  

consensusID : consensus_2656#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2191
fasta sequence
                              [CTCGCCAACGGATGGGGTCCCGCTGGCCCGGGCCACTACCCGCGCCGCCCCGTCGCCGACCTGGTCGACAAGATTGACCTCGATGTGCCCGCCGCCTGGGATGCCCAGGACCAGGACACCAGGCCATTCGAGGTGCCGCAGGAGACACCCACCCAAAAGAAGCGCAGCGTCGCCGAGCTCATGGACAATGACGATGACAAGGCTACGCCACACCACCAGGACAGCGCTACCACCATCTCCAAGTCCAACAAGCGCGAGCGCAAGAAGAGCAAATATCTGTCGCCGCCCTACACCAACTTGGGCGGGATTGCCCTTGTCCAGAAGGCGTCTGATTCGCCAAAGCCATCGCCACCCGCTGCCGCTGAAGATGATGAATACAAGGTATTGCCAAAGCCATTGCAGGAGAATGTTTCTCCACAAGAGGTCTTGCTTTTTGTGCGCAGGACTGGGCTGGACGTCTTCCATAGGATACGGTCAATGAAGGCCGTCCATGCCTTCCTTTCTTTGTATACAAGTTCATTGTTGGTCGAGGATGCTGACTACAAGTCCTTTATAGCACACGAGTGTTCTACGGAGAATGCTTTTACAAATGCTGCTGTGGAGACATCTGATTCTTTTGTAAATTCACGTGCTGCTCTGAAACCAGGCAAGTGTGCTTTGAAGAGGACCAGAAAACAGGGGCAAAATGAGGGTGGGAGTTCTTCGACCAAGACCGAGAAGAGGGGGAAGAAATCTCCTGCGGCTGCCCTAGGCTGTGGTGTAACAATTACCCCTGCTATTCCTATCAGGCAAGCGAGGGCAGAAGACATAAGAAGCCCGACGAAACCAGAGAATGGTGCAAGGGGTATGGCAGTTGGTGTGCAGCTTGAGAAGATCAAGCCAGACTTTAAGAGCCCTACATTAGCTTCAGCGAAGGTAGCAAAAGAACCAGGACAGGAGCAGGACAAAGCAAATGGTGGATCTGTTTTGAAGACCCCAGCCAATGCTTGCAAGAATTTATCTGACCAACCTGCAAAACAGAATGATGCAGGTATGCTGGAAGCAAGACAGTTGCATACCAACATTCAAGCAGATCCAGGTGTGCAAGGCATTGTAGTAGATGTGCCTGTCAGATGTGTTCCGGTGGAAGCAGTGAAGTCTGAAGCTAATATTCCTCTACACAGAGATGGGCAGAATGCTGCTGTAGATGTGACTGACAAAAGTGCACCTCTTCCTAAAAGTGAAGACGTATCCCTATCTCAGCCGACAGATGGAAATAAAGAACATGCAAGCGCCGAAGTGCGTACGGTCCAAGAATCTTATGCTTCCCTTGAAGCGATGGTGCCGGAAATGCTTATGAAAGCGGAGGTCGCCAATGGCACTAATGTAGCAGCAGCAAGCAATTCCCTCAAAGATGAGGGCCAGAGGGCCGATCAGCCTAGCCTGAAGAAGATGGTTCCTGGAGCTAATGTAAACCATTCCTCTGGTGAAGCTACCAATAGTGCTTTCCCTGATATAGCTTATTCTACTCCTAAGAAAAAGAAGAAGAAAATTGCAGAGCACTTTGGAAACCCAGCAGCCCTTCTTTTGGACTTTGCAAAGGGTGTTGTTCTGCCCTCCAAAGAGGAATTGCTCTCTGCATTTGGTAAGTTTGGTCTCGTGATTGAGTCTGAGACGGACATCGTAAAAGATACCCATAGCGCTCGTGTTGTGTTTGGGAAAAGTGCTGAAGCTGAGGCGGCTTACAACAGCGCAGAAACTCTTGGTATGTTTGGTCCCCCGTTTGCTACACCAAGGCTTCATTATCTTCCTCCAATCAAGTTGAGCGTGCCTTCGCCAGCTTCAAAGCCTCCCCTTACGGATATTAGGAAAAACCTGGAGAGGATGATCTCATCCCTGGCTGGCCATTCATCTGTCAAGAAGGCAACTCCATCAGATGGATCAAAGCAAATGCCAGAAAACCTTCTTGGGGAAATGCAGGGGCTTTTGGCAAAAGTTGACAAGATGCTCACCGGGCCTTCTGCTACTGCTAGTAATCCTCATTAGCCCCCTACCGCATGGATTATTCTAATCCATCCGTAGTTAGATGTCTTATTGTCTATGCTGTTTGTCGCTGTCATCAATTATAGCTGCCAATCTCGAGCTAATGATAAATTAGATGTTTTGACGATTTCGGCAGCAACGATTGAAACTATTGTGAATGGTAGTCCGT]

[+] EMBL AK072720             [CTCGCCAACGGATGGGGTCCCGCTGGCCCGGGCCACTACCCGCGCCGCCCCGTCGCCGACCTGGTCGACAAGATTGACCTCGATGTGCCCGCCGCCTGGGATGCCCAGGACCAGGACACCAGGCCATTCGAGGTGCCGCAGGAGACACCCACCCAAAAGAAGCGCAGCGTCGCCGAGCTCATGGACAATGACGATGACAAGGCTACGCCACACCACCAGGACAGCGCTACCACCATCTCCAAGTCCAACAAGCGCGAGCGCAAGAAGAGCAAATATCTGTCGCCGCCCTACACCAACTTGGGCGGGATTGCCCTTGTCCAGAAGGCGTCTGATTCGCCAAAGCCATCGCCACCCGCTGCCGCTGAAGATGATGAATACAAGGTATTGCCAAAGCCATTGCAGGAGAATGTTTCTCCACAAGAGGTCTTGCTTTTTGTGCGCAGGACTGGGCTGGACGTCTTCCATAGGATACGGTCAATGAAGGCCGTCCATGCCTTCCTTTCTTTGTATACAAGTTCATTGTTGGTCGAGGATGCTGACTACAAGTCCTTTATAGCACACGAGTGTTCTACGGAGAATGCTTTTACAAATGCTGCTGTGGAGACATCTGATTCTTTTGTAAATTCACGTGCTGCTCTGAAACCAGGCAAGTGTGCTTTGAAGAGGACCAGAAAACAGGGGCAAAATGAGGGTGGGAGTTCTTCGACCAAGACCGAGAAGAGGGGGAAGAAATCTCCTGCGGCTGCCCTAGGCTGTGGTGTAACAATTACCCCTGCTATTCCTATCAGGCAAGCGAGGGCAGAAGACATAAGAAGCCCGACGAAACCAGAGAATGGTGCAAGGGGTATGGCAGTTGGTGTGCAGCTTGAGAAGATCAAGCCAGACTTTAAGAGCCCTACATTAGCTTCAGCGAAGGTAGCAAAAGAACCAGGACAGGAGCAGGACAAAGCAAATGGTGGATCTGTTTTGAAGACCCCAGCCAATGCTTGCAAGAATTTATCTGACCAACCTGCAAAACAGAATGATGCAGGTATGCTGGAAGCAAGACAGTTGCATACCAACATTCAAGCAGATCCAGGTGTGCAAGGCATTGTAGTAGATGTGCCTGTCAGATGTGTTCCGGTGGAAGCAGTGAAGTCTGAAGCTAATATTCCTCTACACAGAGATGGGCAGAATGCTGCTGTAGATGTGACTGACAAAAGTGCACCTCTTCCTAAAAGTGAAGACGTATCCCTATCTCAGCCGACAGATGGAAATAAAGAACATGCAAGCGCCGAAGTGCGTACGGTCCAAGAATCTTATGCTTCCCTTGAAGCGATGGTGCCGGAAATGCTTATGAAAGCGGAGGTCGCCAATGGCACTAATGTAGCAGCAGCAAGCAATTCCCTCAAAGATGAGGGCCAGAGGGCCGATCAGCCTAGCCTGAAGAAGATGGTTCCTGGAGCTAATGTAAACCATTCCTCTGGTGAAGCTACCAATAGTGCTTTCCCTGATATAGCTTATTCTACTCCTAAGAAAAAGAAGAAGAAAATTGCAGAGCACTTTGGAAACCCAGCAGCCCTTCTTTTGGACTTTGCAAAGGGTGTTGTTCTGCCCTCCAAAGAGGAATTGCTCTCTGCATTTGGTAAGTTTGGTCTCGTGATTGAGTCTGAGACGGACATCGTAAAAGATACCCATAGCGCTCGTGTTGTGTTTGGGAAAAGTGCTGAAGCTGAGGCGGCTTACAACAGCGCAGAAACTCTTGGTATGTTTGGTCCCCCGTTTGCTACACCAAGGCTTCATTATCTTCCTCCAATCAAGTTGAGCGTGCCTTCGCCAGCTTCAAAGCCTCCCCTTACGGATATTAGGAAAAACCTGGAGAGGATGATCTCATCCCTGGCTGGCCATTCATCTGTCAAGAAGGCAACTCCATCAGATGGATCAAAGCAAATGCCAGAAAACCTTCTTGGGGAAATGCAGGGGCTTTTGGCAAAAGTTGACAAGATGCTCACCGGGCCTTCTGCTACTGCTAGTAATCCTCATTAGCCCCCTACCGCATGGATTATTCTAATCCATCCGTAGTTAGATGTCTTATTGTCTATGCTGTTTGTCGCTGTCATCAATTATAGCTGCCAATCTCGAGCTAATGATAAATTAGATGTTTTGACGATTTCGGCAGCAACGATTGAAACTATTGTGAATGGTAGTCCGT]
[+] EMBL CB679339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCACTCTAGTGTTCTACGGAGAATGCTTTTACAAATGCTGCTGTGGAGACATCTGATTCTTTTGTAAATTCACGTGCTGCTCTGAAACCAGGCAAGTGTGCTTTGAAGAGGACCAGAAAACAGGGGCAAAATGAGGGTGGGAGTTCTTCGACCAAGACCGAGAAGAGGGGGAAGAAATCTCCTGCGGCTGCCCTAGGCTGTGGTGTAACAATTACCCCTGCTATTCCTATCAGGCAAGCGAGGGCAGAAGACATAAGAAGCCCGACGAAACCAGAGAATGGTGCAAGGGGTATGGCAGTTGGTGTGCAGCTTGAGAAGATCAAGCCAGACTTTAAGAGCCCTACATTAGCTTCAGCGAAGGTAGCAAAAGAACCAGGACAGGAGCAGGACAAAGCAAATGGTGGATCTGTTTTGAAGACCCCAGCCAATGCTTGCAAGAATTTATCTGACCAACCTGCAAAACAGAATGATGCAGGTATGCTGGAAGCAAGACAGTTGCATACCAACATTCAAGCAGATCCAGGTGTGCAAGGCATTGTAGTAGATGTGCCTGTCAGATGTGTTCCGGTGGAAGCAGTGAAGTCTGAAGCTAATATTCCTCTACACAGAGATGGGCAGAATGCTGCTGTAGATGTGACTGACAAAAGTGCACCTCTTCCTAAAAGTGAAGACGTATCCCTATCTCAGCCGACAGATGGAAATAAAGAACATGCAAGCGCCGAAGTGCGTACGGTCCAAGAATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_2656#0 CTCGCCAACGGATGGGGTCCCGCTGGCCCGGGCCACTACCCGCGCCGCCCCGTCGCCGAC CTGGTCGACAAGATTGACCTCGATGTGCCCGCCGCCTGGGATGCCCAGGACCAGGACACC AGGCCATTCGAGGTGCCGCAGGAGACACCCACCCAAAAGAAGCGCAGCGTCGCCGAGCTC ATGGACAATGACGATGACAAGGCTACGCCACACCACCAGGACAGCGCTACCACCATCTCC AAGTCCAACAAGCGCGAGCGCAAGAAGAGCAAATATCTGTCGCCGCCCTACACCAACTTG GGCGGGATTGCCCTTGTCCAGAAGGCGTCTGATTCGCCAAAGCCATCGCCACCCGCTGCC GCTGAAGATGATGAATACAAGGTATTGCCAAAGCCATTGCAGGAGAATGTTTCTCCACAA GAGGTCTTGCTTTTTGTGCGCAGGACTGGGCTGGACGTCTTCCATAGGATACGGTCAATG AAGGCCGTCCATGCCTTCCTTTCTTTGTATACAAGTTCATTGTTGGTCGAGGATGCTGAC TACAAGTCCTTTATAGCACACGAGTGTTCTACGGAGAATGCTTTTACAAATGCTGCTGTG GAGACATCTGATTCTTTTGTAAATTCACGTGCTGCTCTGAAACCAGGCAAGTGTGCTTTG AAGAGGACCAGAAAACAGGGGCAAAATGAGGGTGGGAGTTCTTCGACCAAGACCGAGAAG AGGGGGAAGAAATCTCCTGCGGCTGCCCTAGGCTGTGGTGTAACAATTACCCCTGCTATT CCTATCAGGCAAGCGAGGGCAGAAGACATAAGAAGCCCGACGAAACCAGAGAATGGTGCA AGGGGTATGGCAGTTGGTGTGCAGCTTGAGAAGATCAAGCCAGACTTTAAGAGCCCTACA TTAGCTTCAGCGAAGGTAGCAAAAGAACCAGGACAGGAGCAGGACAAAGCAAATGGTGGA TCTGTTTTGAAGACCCCAGCCAATGCTTGCAAGAATTTATCTGACCAACCTGCAAAACAG AATGATGCAGGTATGCTGGAAGCAAGACAGTTGCATACCAACATTCAAGCAGATCCAGGT GTGCAAGGCATTGTAGTAGATGTGCCTGTCAGATGTGTTCCGGTGGAAGCAGTGAAGTCT GAAGCTAATATTCCTCTACACAGAGATGGGCAGAATGCTGCTGTAGATGTGACTGACAAA AGTGCACCTCTTCCTAAAAGTGAAGACGTATCCCTATCTCAGCCGACAGATGGAAATAAA GAACATGCAAGCGCCGAAGTGCGTACGGTCCAAGAATCTTATGCTTCCCTTGAAGCGATG GTGCCGGAAATGCTTATGAAAGCGGAGGTCGCCAATGGCACTAATGTAGCAGCAGCAAGC AATTCCCTCAAAGATGAGGGCCAGAGGGCCGATCAGCCTAGCCTGAAGAAGATGGTTCCT GGAGCTAATGTAAACCATTCCTCTGGTGAAGCTACCAATAGTGCTTTCCCTGATATAGCT TATTCTACTCCTAAGAAAAAGAAGAAGAAAATTGCAGAGCACTTTGGAAACCCAGCAGCC CTTCTTTTGGACTTTGCAAAGGGTGTTGTTCTGCCCTCCAAAGAGGAATTGCTCTCTGCA TTTGGTAAGTTTGGTCTCGTGATTGAGTCTGAGACGGACATCGTAAAAGATACCCATAGC GCTCGTGTTGTGTTTGGGAAAAGTGCTGAAGCTGAGGCGGCTTACAACAGCGCAGAAACT CTTGGTATGTTTGGTCCCCCGTTTGCTACACCAAGGCTTCATTATCTTCCTCCAATCAAG TTGAGCGTGCCTTCGCCAGCTTCAAAGCCTCCCCTTACGGATATTAGGAAAAACCTGGAG AGGATGATCTCATCCCTGGCTGGCCATTCATCTGTCAAGAAGGCAACTCCATCAGATGGA TCAAAGCAAATGCCAGAAAACCTTCTTGGGGAAATGCAGGGGCTTTTGGCAAAAGTTGAC AAGATGCTCACCGGGCCTTCTGCTACTGCTAGTAATCCTCATTAGCCCCCTACCGCATGG ATTATTCTAATCCATCCGTAGTTAGATGTCTTATTGTCTATGCTGTTTGTCGCTGTCATC AATTATAGCTGCCAATCTCGAGCTAATGATAAATTAGATGTTTTGACGATTTCGGCAGCA ACGATTGAAACTATTGTGAATGGTAGTCCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)