cluster # 2709

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Oryza sativa
cluster # 2709 cluster # 2709 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2709#0 length = 979 sequences # 2

consensusID : consensus_2709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 979
fasta sequence

                              [CAGAGCTCGCCTCGCCGCCGCCTGACCTCGCCTCGCCGTCGCGCCGCCGCCCACAGACACAGATCGATTCCCTCCGGCTCCGATATGGAAGACGCTGCCGCCCGCCGCGAGCGCTTGCGTGCCCTTCGCGCTGCCAAGGACCTCCTCTCCACCCCCGACCCCGCCGCCGCCGGACAAGGACAACACCACCAAAATGGGAACCGTGAGACAGCACCAGAACAAGCGGAGCATCCAACTTTACCAGCTCCTCTGGACGCACCTGAGGAGGCCTCAAAGGAGAACATTAACCCCACTGACGAATCTGAGGAGGTTCAAAATGATGGTGATATGCCAGCCATGAAGTTCAGAAACTACCTTCCTCATGATGAGCAACTTCGGGGTGGTAAGGTGGCTCCAGTGTCCCTCCCAAAGTTTGAGGATCCAATTTCTGCTGAAACTACAGAGCCAAAGCAAGTTGAGAACCCCTTTGGAAACATAGCTCCAAAGAATCCAAATTGGGATCTGAAAAGAGATGTGCAGAAGAGGATGGACAAACTTGAGAAGCGCACGCAGAAAGCACTGGCTGAGATTGCATTGGAACAACAAAAGGAGAAAGAAGCACTTGGGGAAGGAAGCGATGCAGCCCAAGATTGAGGGAGGGCTCAGGGGAGATGGATATGAAGTAGCTGAACCTTTGATATGTTAAGAATGCTCAAGGGGTGCACTGTGAACTGATGAAAAGCTAATGGTAACATTCGGGGTCTAGCAATTAGTGTGCGACTATACGTTTGTAAGCATGGAAAACCTTAATAAACCTGATTCAGGTTGCTAGACCCGTGTGCTCACTGCTTGATTAAGTGTAGTTAGGGGACTCGCATTGTACTACCCCCACCAAAATGTATGTTTGTGTTGTGCTTAATTCTCTTGTAAGTCAACTGTGCTTAGATTCTGATGCTGCCTG-CCATGGAAA-CCAGTTAAACGTATTAATTTAACATATGCT]

[+] EMBL AK071566             [CAGAGCTCGCCTCGCCGCCGCCTGACCTCGCCTCGCCGTCGCGCCGCCGCCCACAGACACAGATCGATTCCCTCCGGCTCCGATATGGAAGACGCTGCCGCCCGCCGCGAGCGCTTGCGTGCCCTTCGCGCTGCCAAGGACCTCCTCTCCACCCCCGACCCCGCCGCCGCCGGACAAGGACAACACCACCAAAATGGGAACCGTGAGACAGCACCAGAACAAGCGGAGCATCCAACTTTACCAGCTCCTCTGGACGCACCTGAGGAGGCCTCAAAGGAGAACATTAACCCCACTGACGAATCTGAGGAGGTTCAAAATGATGGTGATATGCCAGCCATGAAGTTCAGAAACTACCTTCCTCATGATGAGCAACTTCGGGGTGGTAAGGTGGCTCCAGTGTCCCTCCCAAAGTTTGAGGATCCAATTTCTGCTGAAACTACAGAGCCAAAGCAAGTTGAGAACCCCTTTGGAAACATAGCTCCAAAGAATCCAAATTGGGATCTGAAAAGAGATGTGCAGAAGAGGATGGACAAACTTGAGAAGCGCACGCAGAAAGCACTGGCTGAGATTGCATTGGAACAACAAAAGGAGAAAGAAGCACTTGGGGAAGGAAGCGATGCAGCCCAAGATTGAGGGAGGGCTCAGGGGAGATGGATATGAAGTAGCTGAACCTTTGATATGTTAAGAATGCTCAAGGGGTGCACTGTGAACTGATGAAAAGCTAATGGTAACATTCGGGGTCTAGCAATTAGTGTGCGACTATACGTTTGTAAGCATGGAAAACCTTAATAAACCTGATTCAGGTTGCTAGACCCGTGTGCTCACTGCTTGATTAAGTGTAGTTAGGGGACTCGCATTGTACTACCCCCACCAAAATGTATGTTTGTGTTGTGCTTAATTCTCTTGTAAGTCAACTGTGCTTAGATTCTGATGCTGCCTG CCATGGAAA CCAGTTAAACGTATTAATTTAACATATGCT]
[-] EMBL CB682051             [                                                                                                                                                                                        ACCACCAAAATGGGAACCGTGAGACAGCACCAGAACAAGCGGAGCATCCAACTTTACCAGCTCCTCTGGACGCACCTGAGGAGGCCTCAAAGGAGAACATTAACCCCACTGACGAATCTGAGGAGGTTCAAAATGATGGTGATATGCCAGCCATGAAGTTCAGAAACTACCTTCCTCATGATGAGCAACTTCGGGGTGGTAAGGTGGCTCCAGTGTCCCTCCCAAAGTTTGAGGATCCAATTTCTGCTGAAACTACAGAGCCAAAGCAAGTTGAGAACCCCTTTGGAAACATAGCTCCAAAGAATCCAAATTGGGATCTGAAAAGAGATGTGCAGAAGAGGATGGACAAACTTGAGAAGCGCACGCAGAAAGCACTGGCTGAGATTGCATTGGAACAACAAAAGGAGAAAGAAGCACTTGGGGAAGGAAGCGATGCAGCCCAAGATTGAGGGAGGGCTCAGGGGAGATGGATATGAAGTAGCTGAACCTTTGATATGTTAAGAATGCTCAAGGGGTGCACTGTGAACTGATGAAAAGCTAATGGTAACATTCGGGGTCTAGCAATTAGTGTGCGACTATACGTTTGTAAGCATGGAAAACCTTAATAAACCTGATTCAGGTTGCTAGACCCGTGTGCTCACTGCTTGATTAAGTGTAGTTAGGGGACTCGCATTGTACTACCCCCACCAAAATGTATGTTTGTGTTGTGCTTAATTCTCTTGTAAGTCAACTGTGCTTAGATTCTGATGCTGCCTGCCCATGGAAACCCAGTTAA                      ]




>consensus_2709#0
CAGAGCTCGCCTCGCCGCCGCCTGACCTCGCCTCGCCGTCGCGCCGCCGCCCACAGACAC
AGATCGATTCCCTCCGGCTCCGATATGGAAGACGCTGCCGCCCGCCGCGAGCGCTTGCGT
GCCCTTCGCGCTGCCAAGGACCTCCTCTCCACCCCCGACCCCGCCGCCGCCGGACAAGGA
CAACACCACCAAAATGGGAACCGTGAGACAGCACCAGAACAAGCGGAGCATCCAACTTTA
CCAGCTCCTCTGGACGCACCTGAGGAGGCCTCAAAGGAGAACATTAACCCCACTGACGAA
TCTGAGGAGGTTCAAAATGATGGTGATATGCCAGCCATGAAGTTCAGAAACTACCTTCCT
CATGATGAGCAACTTCGGGGTGGTAAGGTGGCTCCAGTGTCCCTCCCAAAGTTTGAGGAT
CCAATTTCTGCTGAAACTACAGAGCCAAAGCAAGTTGAGAACCCCTTTGGAAACATAGCT
CCAAAGAATCCAAATTGGGATCTGAAAAGAGATGTGCAGAAGAGGATGGACAAACTTGAG
AAGCGCACGCAGAAAGCACTGGCTGAGATTGCATTGGAACAACAAAAGGAGAAAGAAGCA
CTTGGGGAAGGAAGCGATGCAGCCCAAGATTGAGGGAGGGCTCAGGGGAGATGGATATGA
AGTAGCTGAACCTTTGATATGTTAAGAATGCTCAAGGGGTGCACTGTGAACTGATGAAAA
GCTAATGGTAACATTCGGGGTCTAGCAATTAGTGTGCGACTATACGTTTGTAAGCATGGA
AAACCTTAATAAACCTGATTCAGGTTGCTAGACCCGTGTGCTCACTGCTTGATTAAGTGT
AGTTAGGGGACTCGCATTGTACTACCCCCACCAAAATGTATGTTTGTGTTGTGCTTAATT
CTCTTGTAAGTCAACTGTGCTTAGATTCTGATGCTGCCTGCCATGGAAACCAGTTAAACG
TATTAATTTAACATATGCT

clustalw multiple alignements is not computed in this case