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Oryza sativa
cluster # 271 cluster # 271       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_271#0 length = 1759 sequences # 2  

consensusID : consensus_271#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1759
fasta sequence
                              [CGACGCATCCGAGATTCTATACCTGCTCGAGTGCTCGATCCGTCACGGACTGATGGACGCCGGCGACGCAGCCACCACGAGGGCCCGGAAGCCGGTCGTGCTCTACCCGTCGCCGGGCATGGGCCACCTGGTCTCCATGATCGAGCTCGGCAAGGTGTTCGCCGCCCGCGGCCTCGCCGTCACCGTCGTCGTCGTCGACCCACCGTACGGCAACACCGGCGCGACGGGGCCTTTCCTCGCCGGCGTCACCGCGGCCAACCCGGCCATGACGTTCCACCGTCTGCCGAAGGTGGAGGTGCCGCCAGTGGCGTCCAAGCACCACGAGTCGCTCACCTTCGAGGTCACCCGCCTCTCCAACCCCGGCCTCCGCGACTTCCTCGCCGGCGCCTCCCCGGTCGTCCTCATCATCGACTTCTTCTGCAACGCCGCCCTCGACGTCGCCGACGAGCTGGGTGTCCCCGCCTACATGTTCTACACTTCCGGCGCCGAGATCCTGGCTTTCTTCTTGTACCTCCCGGTCCTGCACGCTCAGACCACGGCGAACTTCGGGGAGATGGGCGAAGAGCTCGTGCACGCCCCCGGCATCCCCTCGTTCCCGGCGACGCACTCCGTCCTGCCGCTCATGGAACGCGACGACCCGGCCTACGCGGAATTTCTGAAAGCGTCCGCCGACCTCTGCCGCACCCAGGGCTTCCTCGTCAACACATTCCGCTCGCTCGAGCCGCGGGCCGTCGAGACCATTGCCGCGGGGAGCTGCGCGCCTCCGGGCGTCTCGACGCCGCCCGTCTACTGCATCGGCCCGCTGATAAAGTCGGCGGAGGTGGGCGAGAACCGGAGCGAGGAGTGCCTGGCGTGGCTGGACACGCAGCCCAACGGCAGCGTGGTGTTCCTCTGCTTCGGCAGCATCGGCCTGTTCAGCGCGGAGCAGATCAAGGAGGTGGCGGCGGGGCTGGAGGCGAGCGGGCAGCGGTTCCTGTGGGTGGTGCGGAGCCCGCCGAGCGACGACCCGGCGAAGAAGTTCGACAAGCCGCCGGAGCCCGACCTGGACGCGCTCCTCCCCAAGGGGTTCCTGGAGCGGACCAAGGGCAGGGGGCTCGTCGTCAAGTCGTGGGCGCCGCAGCGCGACGTGCTGGCGCACGCGGCGGTGGGCGGCTTCGTGACGCACTGCGGGTGGAACTCGGTGCTGGAGTCGATCGTGGCCGGCGTGCCGATGCTGGCGTGGCCGCTGTACGCGGAGCAGCGGATGAACAGGGTGTTCCTGGAGAAGGAGATGCGGCTGGCCGTGGCGGTGGAAGGGTACGACGACGACGTCGGGGAGGGGACCGTGAAGGCGGAGGAGGTGGCGGCGAAGGTGCGGTGGCTGATGGAGTCCGACGGCGGGAGGGCGCTCCTGGAGCGGACGCTGGCGGCCATGCGGCGGGCGAAGGCGGCGCTGCGCGACGGCGGCGAGTCGGAGGTGACGTTGGCGCGGCTGGTGGAGTCGTGGAGGGAAGCGGCCAGCGCATGACGTGGGAAATGATTGAAGGATGATTGAATGAGGTGGTGGGCTGTGTTGTTGGGTGGAGATTAAAGTGACGCACGTAACCACCGAGTTGGGCCACCACAGAGATGGGTCGTTCATGACTGGGACTTTGGGTGATTTCAGTTTCGTACTATATGCTGTCTTGAGTACACCGTAATTGTTTTCCTTGCTCTTGGGGTAAAAAGAGCAGTAGACAAACGTATGATTTCAGTTTCATCTGTGATTGATTGCTAAAAA]

[+] EMBL AK071819             [CGACGCATCCGAGATTCTATACCTGCTCGAGTGCTCGATCCGTCACGGACTGATGGACGCCGGCGACGCAGCCACCACGAGGGCCCGGAAGCCGGTCGTGCTCTACCCGTCGCCGGGCATGGGCCACCTGGTCTCCATGATCGAGCTCGGCAAGGTGTTCGCCGCCCGCGGCCTCGCCGTCACCGTCGTCGTCGTCGACCCACCGTACGGCAACACCGGCGCGACGGGGCCTTTCCTCGCCGGCGTCACCGCGGCCAACCCGGCCATGACGTTCCACCGTCTGCCGAAGGTGGAGGTGCCGCCAGTGGCGTCCAAGCACCACGAGTCGCTCACCTTCGAGGTCACCCGCCTCTCCAACCCCGGCCTCCGCGACTTCCTCGCCGGCGCCTCCCCGGTCGTCCTCATCATCGACTTCTTCTGCAACGCCGCCCTCGACGTCGCCGACGAGCTGGGTGTCCCCGCCTACATGTTCTACACTTCCGGCGCCGAGATCCTGGCTTTCTTCTTGTACCTCCCGGTCCTGCACGCTCAGACCACGGCGAACTTCGGGGAGATGGGCGAAGAGCTCGTGCACGCCCCCGGCATCCCCTCGTTCCCGGCGACGCACTCCGTCCTGCCGCTCATGGAACGCGACGACCCGGCCTACGCGGAATTTCTGAAAGCGTCCGCCGACCTCTGCCGCACCCAGGGCTTCCTCGTCAACACATTCCGCTCGCTCGAGCCGCGGGCCGTCGAGACCATTGCCGCGGGGAGCTGCGCGCCTCCGGGCGTCTCGACGCCGCCCGTCTACTGCATCGGCCCGCTGATAAAGTCGGCGGAGGTGGGCGAGAACCGGAGCGAGGAGTGCCTGGCGTGGCTGGACACGCAGCCCAACGGCAGCGTGGTGTTCCTCTGCTTCGGCAGCATCGGCCTGTTCAGCGCGGAGCAGATCAAGGAGGTGGCGGCGGGGCTGGAGGCGAGCGGGCAGCGGTTCCTGTGGGTGGTGCGGAGCCCGCCGAGCGACGACCCGGCGAAGAAGTTCGACAAGCCGCCGGAGCCCGACCTGGACGCGCTCCTCCCCAAGGGGTTCCTGGAGCGGACCAAGGGCAGGGGGCTCGTCGTCAAGTCGTGGGCGCCGCAGCGCGACGTGCTGGCGCACGCGGCGGTGGGCGGCTTCGTGACGCACTGCGGGTGGAACTCGGTGCTGGAGTCGATCGTGGCCGGCGTGCCGATGCTGGCGTGGCCGCTGTACGCGGAGCAGCGGATGAACAGGGTGTTCCTGGAGAAGGAGATGCGGCTGGCCGTGGCGGTGGAAGGGTACGACGACGACGTCGGGGAGGGGACCGTGAAGGCGGAGGAGGTGGCGGCGAAGGTGCGGTGGCTGATGGAGTCCGACGGCGGGAGGGCGCTCCTGGAGCGGACGCTGGCGGCCATGCGGCGGGCGAAGGCGGCGCTGCGCGACGGCGGCGAGTCGGAGGTGACGTTGGCGCGGCTGGTGGAGTCGTGGAGGGAAGCGGCCAGCGCATGACGTGGGAAATGATTGAAGGATGATTGAATGAGGTGGTGGGCTGTGTTGTTGGGTGGAGATTAAAGTGACGCACGTAACCACCGAGTTGGGCCACCACAGAGATGGGTCGTTCATGACTGGGACTTTGGGTGATTTCAGTTTCGTACTATATGCTGTCTTGAGTACACCGTAATTGTTTTCCTTGCTCTTGGGGTAAAAAGA                                                   ]
[+] EMBL AU173084             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGCATGACGTGGGAAATGATTGAAGGATGATTGAATGAGGTGGTGGGCTGTGTTGTTGGGTGGAGATTAAAGTGACGCACGTAACCACCGAGTTGGGCCACCACAGAGATGGGTCGTTCATGACTGGGACTTTGGGTGATTTCAGTTTCGTACTATATGCTGTCTTGAGTACACCGTAATTGTTTTCCTTGCTCTTGGGGTAAAAAGAGCAGTAGACAAACGTATGATTTCAGTTTCATCTGTGATTGATTGCTAAAAA]


>consensus_271#0 CGACGCATCCGAGATTCTATACCTGCTCGAGTGCTCGATCCGTCACGGACTGATGGACGC CGGCGACGCAGCCACCACGAGGGCCCGGAAGCCGGTCGTGCTCTACCCGTCGCCGGGCAT GGGCCACCTGGTCTCCATGATCGAGCTCGGCAAGGTGTTCGCCGCCCGCGGCCTCGCCGT CACCGTCGTCGTCGTCGACCCACCGTACGGCAACACCGGCGCGACGGGGCCTTTCCTCGC CGGCGTCACCGCGGCCAACCCGGCCATGACGTTCCACCGTCTGCCGAAGGTGGAGGTGCC GCCAGTGGCGTCCAAGCACCACGAGTCGCTCACCTTCGAGGTCACCCGCCTCTCCAACCC CGGCCTCCGCGACTTCCTCGCCGGCGCCTCCCCGGTCGTCCTCATCATCGACTTCTTCTG CAACGCCGCCCTCGACGTCGCCGACGAGCTGGGTGTCCCCGCCTACATGTTCTACACTTC CGGCGCCGAGATCCTGGCTTTCTTCTTGTACCTCCCGGTCCTGCACGCTCAGACCACGGC GAACTTCGGGGAGATGGGCGAAGAGCTCGTGCACGCCCCCGGCATCCCCTCGTTCCCGGC GACGCACTCCGTCCTGCCGCTCATGGAACGCGACGACCCGGCCTACGCGGAATTTCTGAA AGCGTCCGCCGACCTCTGCCGCACCCAGGGCTTCCTCGTCAACACATTCCGCTCGCTCGA GCCGCGGGCCGTCGAGACCATTGCCGCGGGGAGCTGCGCGCCTCCGGGCGTCTCGACGCC GCCCGTCTACTGCATCGGCCCGCTGATAAAGTCGGCGGAGGTGGGCGAGAACCGGAGCGA GGAGTGCCTGGCGTGGCTGGACACGCAGCCCAACGGCAGCGTGGTGTTCCTCTGCTTCGG CAGCATCGGCCTGTTCAGCGCGGAGCAGATCAAGGAGGTGGCGGCGGGGCTGGAGGCGAG CGGGCAGCGGTTCCTGTGGGTGGTGCGGAGCCCGCCGAGCGACGACCCGGCGAAGAAGTT CGACAAGCCGCCGGAGCCCGACCTGGACGCGCTCCTCCCCAAGGGGTTCCTGGAGCGGAC CAAGGGCAGGGGGCTCGTCGTCAAGTCGTGGGCGCCGCAGCGCGACGTGCTGGCGCACGC GGCGGTGGGCGGCTTCGTGACGCACTGCGGGTGGAACTCGGTGCTGGAGTCGATCGTGGC CGGCGTGCCGATGCTGGCGTGGCCGCTGTACGCGGAGCAGCGGATGAACAGGGTGTTCCT GGAGAAGGAGATGCGGCTGGCCGTGGCGGTGGAAGGGTACGACGACGACGTCGGGGAGGG GACCGTGAAGGCGGAGGAGGTGGCGGCGAAGGTGCGGTGGCTGATGGAGTCCGACGGCGG GAGGGCGCTCCTGGAGCGGACGCTGGCGGCCATGCGGCGGGCGAAGGCGGCGCTGCGCGA CGGCGGCGAGTCGGAGGTGACGTTGGCGCGGCTGGTGGAGTCGTGGAGGGAAGCGGCCAG CGCATGACGTGGGAAATGATTGAAGGATGATTGAATGAGGTGGTGGGCTGTGTTGTTGGG TGGAGATTAAAGTGACGCACGTAACCACCGAGTTGGGCCACCACAGAGATGGGTCGTTCA TGACTGGGACTTTGGGTGATTTCAGTTTCGTACTATATGCTGTCTTGAGTACACCGTAAT TGTTTTCCTTGCTCTTGGGGTAAAAAGAGCAGTAGACAAACGTATGATTTCAGTTTCATC TGTGATTGATTGCTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)