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Oryza sativa
cluster # 2710 cluster # 2710       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2710#0 length = 855 sequences # 2  

consensusID : consensus_2710#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 855
fasta sequence
                              [TCGAATATTCTGCTATGATCCTGGCGGGAAGGGAAGGGAAGCGACTTGCGGCGGAGCCCTCCCCGCGTCTCCCCCGCCATCCCACCACCGCCGATGGCCGCTAGGCCCGCCACCGACGGGGAGGGCGTCGACGCCTCCGTACCCTGGTGGCGGCGGAAGCGCCCGCGGCTGCCGCCGCCGCCGCCGGAGGCCGACGCGGAGGAGGTGAAGGCGGAGGCGCTGGCGCTGATGGCGGCCCACCCCGTGCTCCCGCGGCTCGTCGTCTTCGACCTCGACCACACCCTCTGGCCGTTCCAGTGTGATCGTCTGCCAAAAGATGAACCCCCTTATCTTTATCCACAAGCTAGAGGTATACTGAAAGCACTTAAGGATAGGGGAATTGAGATGGCCATTGCTTCTCGAGCATCCAGGAAGAAAGGTGTTGCAAAAGCATTTCTGGAAAAACTTGGCATTCACTTCATGTTTGGGGCTCAGGAAATATTCTACACTTGGAGTCCAAAGAATGAGCATTTCCAGAGTATCCATCGGAAGACAGGTGTACCTTTCAAGTCTATGCTTTTCTTTGATGATGAGGCCAGAAATATTATAGCAACAAGGAAATTGGGGGTCAGTTGTGTGCTTGTGGATACTGGTATAACTCTGGAGAAGTTAAGAACTGGACTAAGCAACTATGCTAATAGATCAGCATCACCAAATGCAGAGCCGGCGGGCGGGCGAAGTGCTGAGATTACGTGGTATTTAGATGTGGCTACTGGCTAGTTAATACTAGTCTGGGAGGACTTATGTATGCTCATGTATTATATACTCCTTTGGAGCACGTACTTTAATATAATTTTAATATAATTTAAGGGACAA]

[+] EMBL AK111457             [TCGAATATTCTGCTATGATCCTGGCGGGAAGGGAAGGGAAGCGACTTGCGGCGGAGCCCTCCCCGCGTCTCCCCCGCCATCCCACCACCGCCGATGGCCGCTAGGCCCGCCACCGACGGGGAGGGCGTCGACGCCTCCGTACCCTGGTGGCGGCGGAAGCGCCCGCGGCTGCCGCCGCCGCCGCCGGAGGCCGACGCGGAGGAGGTGAAGGCGGAGGCGCTGGCGCTGATGGCGGCCCACCCCGTGCTCCCGCGGCTCGTCGTCTTCGACCTCGACCACACCCTCTGGCCGTTCCAGTGTGATCGTCTGCCAAAAGATGAACCCCCTTATCTTTATCCACAAGCTAGAGGTATACTGAAAGCACTTAAGGATAGGGGAATTGAGATGGCCATTGCTTCTCGAGCATCCAGGAAGAAAGGTGTTGCAAAAGCATTTCTGGAAAAACTTGGCATTCACTTCATGTTTGGGGCTCAGGAAATATTCTACACTTGGAGTCCAAAGAATGAGCATTTCCAGAGTATCCATCGGAAGACAGGTGTACCTTTCAAGTCTATGCTTTTCTTTGATGATGAGGCCAGAAATATTATAGCAACAAGGAAATTGGGGGTCAGTTGTGTGCTTGTGGATACTGGTATAACTCTGGAGAAGTTAAGAACTGGACTAAGCAACTATGCTAATAGATCAGCATCACCAAATGCAGAGCCGGCGGGCGGGCGAAGTGCTGAGATTACGTGGTATTTAGATGTGGCTACTGGCTAGTTAATACTAGTCTGGGAGGACTTATGTATGCTCATGTATTATATACTCCTTTGGAGCACGTACTTTAATATAATTTTAATATAATTTAAGGGACAA]
[+] EMBL AK073814             [                                 AAGGGAAGCGACTTGCGGCGGAGCCCTCCCCGCGTCTCCCCCGCCATCCCACCACCGCCGATGGCCGCTAGGCCCGCCACCGACGGGGAGGGCGTCGACGCCTCCGTACCCTGGTGGCGGCGGAAGCGCCCGCGGCTGCCGCCGCCGCCGCCGGAGGCCGACGCGGAGGAGGTGAAGGCGGAGGCGCTGGCGCTGATGGCGGCCCACCCCGTGCTCCCGCGGCTCGTCGTCTTCGACCTCGACCACACCCTCTGGCCGTTCCAGTGTGATCGTCTGCCAAAAGATGAACCCCCTTATCTTTATCCACAAGCTAGAGGTATACTGAAAGCACTTAAGGATAGGGGAATTGAGATGGCCATTGCTTCTCGAGCATCCAGGAAGAAAGGTGTTGCAAAAGCATTTCTGGAAAAACTTGGCATTCACTTCATGTTTGGGGCTCAGGAAATATTCTACACTTGGAGTCCAAAGAATGAGCATTTCCAGAGTATCCATCGGAAGACAGGTGTACCTTTCAAGTCTATGCTTTTCTTTGATGATGAGGCCAGAAATATTATAGCAACAAGGAAATTGGGGGTCAGTTGTGTGCTTGTGGATACTGGTATAACTCTGGAGAAGTTAAGAACTGGACTAAGCAACTATGCTAATAGATCAGCATCACCAAATGCAGAGCCGGCGGGCGGGCGAAGTGCTGAGATTACGTGGTATTTAGATGTGGCTACTGGCTAGTTAATACTAGTCTGGGAGGACTTATGTATGCTCATGTATTATATACTCCTTTGGAGCACGTACTTTAATATAATTTTAATAT              ]


>consensus_2710#0 TCGAATATTCTGCTATGATCCTGGCGGGAAGGGAAGGGAAGCGACTTGCGGCGGAGCCCT CCCCGCGTCTCCCCCGCCATCCCACCACCGCCGATGGCCGCTAGGCCCGCCACCGACGGG GAGGGCGTCGACGCCTCCGTACCCTGGTGGCGGCGGAAGCGCCCGCGGCTGCCGCCGCCG CCGCCGGAGGCCGACGCGGAGGAGGTGAAGGCGGAGGCGCTGGCGCTGATGGCGGCCCAC CCCGTGCTCCCGCGGCTCGTCGTCTTCGACCTCGACCACACCCTCTGGCCGTTCCAGTGT GATCGTCTGCCAAAAGATGAACCCCCTTATCTTTATCCACAAGCTAGAGGTATACTGAAA GCACTTAAGGATAGGGGAATTGAGATGGCCATTGCTTCTCGAGCATCCAGGAAGAAAGGT GTTGCAAAAGCATTTCTGGAAAAACTTGGCATTCACTTCATGTTTGGGGCTCAGGAAATA TTCTACACTTGGAGTCCAAAGAATGAGCATTTCCAGAGTATCCATCGGAAGACAGGTGTA CCTTTCAAGTCTATGCTTTTCTTTGATGATGAGGCCAGAAATATTATAGCAACAAGGAAA TTGGGGGTCAGTTGTGTGCTTGTGGATACTGGTATAACTCTGGAGAAGTTAAGAACTGGA CTAAGCAACTATGCTAATAGATCAGCATCACCAAATGCAGAGCCGGCGGGCGGGCGAAGT GCTGAGATTACGTGGTATTTAGATGTGGCTACTGGCTAGTTAATACTAGTCTGGGAGGAC TTATGTATGCTCATGTATTATATACTCCTTTGGAGCACGTACTTTAATATAATTTTAATA TAATTTAAGGGACAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)