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Oryza sativa
cluster # 2794 cluster # 2794       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2794#0 length = 1657 sequences # 2  

consensusID : consensus_2794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1657
fasta sequence
                              [AGCGGGTGATAGGAACCGCGACGCCATTGGCGCTTCTTCTGTCTTGGTGGTTGCCGTGCCTGCGCGCATCGATGGAGGGGTTCTGCTTCGCGCGGTGCCGCTTCACGCGGCTGGTGGTGGCGATGCAGCTGGTGATGGGCGTGCTCGTCATCTGCATCAGCATGGCCAGCCTCCACCGCTTCTACACCACCGACGCCCTCCTCCCCGGCGGGCTGGACGACCCCGCCCGCTGCGCCAGGTTCCACGGCGCCGTCGCCGGCGGGTACTCCGGCTTCGACATCCGCGCGCTGGCGGACCGCGTCGACGAGGTGCTCGTCCAGCTCGCCGAGCTGCAGGACAAGCTGGAGGCCACGGCGCTCAAGATCGGCAAGAAGACCAAGAAGAGGAAGGGGAAGGGGAAGCTGCAGCAGCAGGAGAACATGACCATGACGGAGTTCCAGCGATTCCTGGAGGACGAGGTGATCCACCCGCTGTACGGCGCGCACATCGTGCTCCGGCTGATCCGCATCCCCCGCCCCGACCCCGACGGCGGCGCCCCGGCCGTCGACCCGCTGGTCAACTTCTTCGCCGCGGAGGAGACGCGCAAGTACGTGACGGCGAAGCGCAACCGCGAGGGGCGGCCGGGCGCGTACGGCGCGAACCGGACGTACGGCAGCATCGGGCACGCGTGCGTGGTGATGCGGCGGGAGCTGGACGAGTACATGAGCTACGACGTGGGCGCGCTCTGCCCCGACGACTGGGACCTCGGCCAGCGCCTGATGCTCGGCGGCTGCGACCCCCTCCCCCGGCGTCGCTGCCTCGCCCGCGCCTCCAAGCTGTTCCGCCGGCCGCTCCCCATCAACGAGTCGCTGTGGGCGCTCCCCGACGACGGCAACGTCCGGTGGAGCCGCTACCACTGCCGCGGCTACCGGTGCCTGTCGGCCCGCAACCCGCGGCGCGGCTACGACCGGTGCGTGGGCTGCTTCGACATGGACAGGGAGAAGCAGCGGTGGATGCAGGGCAGCAACGGCACCACCCTGGCCGACTTCCGGATGGAGGAGGTGCTGGCGGTGAAGCCCGGGGAGATACGGGTGGGGCTGGACGTGACGGTGGGGACGGGGAGCTTCGCGGCGAGGATGAGGGAGCGAGGGGTGACGGTGGTGACGACGGCGGTGAACCTGGGGGCGCCGTTCGCGGAGACGGTGGCGCTGCGTGGGCTGGTGGCGCTGTACGCCGGGCTGGGGCAGAGGCTGCCGCTGTTCGACAACAGCATGGACATGGTGCACACGGGCGGGGTGCTGGATGGTTGGGTGGACCTGCAGATGCTGGACTTCGTGCTCTTCGACTGGGACCGGGTGCTCCGCCCCGGTGGCCTCCTCTGGGTGGACAAGTTCGCCTGCGCGCGCAAGGACCTCGACGACTACATGTACATGTTCCTCCAGTTCCGCTACAAGAAGCACCGCTGGGTCGTCTCCTTCAAGTCCAGGGACGAGGTCTACCTCTCCGCCCTGCTCGAGAAGCCGCTACGCTCATGATCCACCAGCTCGTATCTCTCTTAGTTACGCTGCAATGCTGCGTCTGATATGTGTTGCTGTTAATCTTAGTAGCTCTGATTCATCTGACACCTCGATGAATAAATACAATTATCTATCTATTATATTATTAAAGAAATAGAAAA]

[+] EMBL AK103398             [AGCGGGTGATAGGAACCGCGACGCCATTGGCGCTTCTTCTGTCTTGGTGGTTGCCGTGCCTGCGCGCATCGATGGAGGGGTTCTGCTTCGCGCGGTGCCGCTTCACGCGGCTGGTGGTGGCGATGCAGCTGGTGATGGGCGTGCTCGTCATCTGCATCAGCATGGCCAGCCTCCACCGCTTCTACACCACCGACGCCCTCCTCCCCGGCGGGCTGGACGACCCCGCCCGCTGCGCCAGGTTCCACGGCGCCGTCGCCGGCGGGTACTCCGGCTTCGACATCCGCGCGCTGGCGGACCGCGTCGACGAGGTGCTCGTCCAGCTCGCCGAGCTGCAGGACAAGCTGGAGGCCACGGCGCTCAAGATCGGCAAGAAGACCAAGAAGAGGAAGGGGAAGGGGAAGCTGCAGCAGCAGGAGAACATGACCATGACGGAGTTCCAGCGATTCCTGGAGGACGAGGTGATCCACCCGCTGTACGGCGCGCACATCGTGCTCCGGCTGATCCGCATCCCCCGCCCCGACCCCGACGGCGGCGCCCCGGCCGTCGACCCGCTGGTCAACTTCTTCGCCGCGGAGGAGACGCGCAAGTACGTGACGGCGAAGCGCAACCGCGAGGGGCGGCCGGGCGCGTACGGCGCGAACCGGACGTACGGCAGCATCGGGCACGCGTGCGTGGTGATGCGGCGGGAGCTGGACGAGTACATGAGCTACGACGTGGGCGCGCTCTGCCCCGACGACTGGGACCTCGGCCAGCGCCTGATGCTCGGCGGCTGCGACCCCCTCCCCCGGCGTCGCTGCCTCGCCCGCGCCTCCAAGCTGTTCCGCCGGCCGCTCCCCATCAACGAGTCGCTGTGGGCGCTCCCCGACGACGGCAACGTCCGGTGGAGCCGCTACCACTGCCGCGGCTACCGGTGCCTGTCGGCCCGCAACCCGCGGCGCGGCTACGACCGGTGCGTGGGCTGCTTCGACATGGACAGGGAGAAGCAGCGGTGGATGCAGGGCAGCAACGGCACCACCCTGGCCGACTTCCGGATGGAGGAGGTGCTGGCGGTGAAGCCCGGGGAGATACGGGTGGGGCTGGACGTGACGGTGGGGACGGGGAGCTTCGCGGCGAGGATGAGGGAGCGAGGGGTGACGGTGGTGACGACGGCGGTGAACCTGGGGGCGCCGTTCGCGGAGACGGTGGCGCTGCGTGGGCTGGTGGCGCTGTACGCCGGGCTGGGGCAGAGGCTGCCGCTGTTCGACAACAGCATGGACATGGTGCACACGGGCGGGGTGCTGGATGGTTGGGTGGACCTGCAGATGCTGGACTTCGTGCTCTTCGACTGGGACCGGGTGCTCCGCCCCGGTGGCCTCCTCTGGGTGGACAAGTTCGCCTGCGCGCGCAAGGACCTCGACGACTACATGTACATGTTCCTCCAGTTCCGCTACAAGAAGCACCGCTGGGTCGTCTCCTTCAAGTCCAGGGACGAGGTCTACCTCTCCGCCCTGCTCGAGAAGCCGCTACGCTCATGATCCACCAGCTCGTATCTCTCTTAGTTACGCTGCAATGCTGCGTCTGATATGTGTTGCTGTTAATCTTAGTAGCTCTGATTCATCTGACACCTCGATGAATAAATACAATTATCTATCTATTATATTATTAAAGAAATAGAAAA]
[+] EMBL AK101624             [                     CGCCATTGGCGCTTCTTCTGTCTTGGTGGTTGCCGTGCCTGCGCGCATCGATGGAGGGGTTCTGCTTCGCGCGGTGCCGCTTCACGCGGCTGGTGGTGGCGATGCAGCTGGTGATGGGCGTGCTCGTCATCTGCATCAGCATGGCCAGCCTCCACCGCTTCTACACCACCGACGCCCTCCTCCCCGGCGGGCTGGACGACCCCGCCCGCTGCGCCAGGTTCCACGGCGCCGTCGCCGGCGGGTACTCCGGCTTCGACATCCGCGCGCTGGCGGACCGCGTCGACGAGGTGCTCGTCCAGCTCGCCGAGCTGCAGGACAAGCTGGAGGCCACGGCGCTCAAGATCGGCAAGAAGACCAAGAAGAGGAAGGGGAAGGGGAAGCTGCAGCAGCAGGAGAACATGACCATGACGGAGTTCCAGCGATTCCTGGAGGACGAGGTGATCCACCCGCTGTACGGCGCGCACATCGTGCTCCGGCTGATCCGCATCCCCCGCCCCGACCCCGACGGCGGCGCCCCGGCCGTCGACCCGCTGGTCAACTTCTTCGCCGCGGAGGAGACGCGCAAGTACGTGACGGCGAAGCGCAACCGCGAGGGGCGGCCGGGCGCGTACGGCGCGAACCGGACGTACGGCAGCATCGGGCACGCGTGCGTGGTGATGCGGCGGGAGCTGGACGAGTGCATGAGCTACGACGTGGGCGCGCTCTGCCCCGACGACTGGGACCTCGGCCAGCGCCTGATGCTCGGCGGCTGCGACCCCCTCCCCCGGCGTCGCTGCCTCGCCCGCGCCTCCAAGCTGTTCCGCCGGCCGCTCCCCATCAACGAGTCGCTGTGGGCGCTCCCCGACGACGGCAACGTCCGGTGGAGCCGCTACCACTGCCGCGGCTACCGGTGCCTGTCGGCCCGCAACCCGCGGCGCGGCTACGACCGGTGCGTGGGCTGCTTCGACATGGACAGGGAGAAGCAGCGGTGGATGCAGGGCAGCAACGGCACCACCCTGGCCGACTTCCGGATGGAGGAGGTGCTGGCGGTGAAGCCCGGGGAGATACGGGTGGGGCTGGACGTGACGGTGGGGACGGGGAGCTTCGCGGCGAGGATGAGGGAGCGAGGGGTGACGGTGGTGACGACGGCGGTGAACCTGGGGGCGCCGTTCGCGGAGACGGTGGCGCTGCGTGGGCTGGTGGCGCTGTACGCCGGGCTGGGGCAGAGGCTGCCGCTGTTCGACAACAGCATGGACATGGTGCACACGGGCGGGGTGCTGGATGGTTGGGTGGACCTGCAGATGCTGGACTTCGTGCTCTTCGACTGGGACCGGGTGCTCCGCCCCGGTGGCCTCCTCTGGGTGGACAAGTTCGCCTGCGCGCGCAAGGACCTCGACGACTACATGTACATGTTCCTCCAGTTCCGCTACAAGAAGCACCGCTGGGTCGTCTCCTTCAAGTCCAGGGACGAGGTCTACCTCTCCGCCCTGCTCGAGAAGCCGCTACGCTCATGATCCACCAGCTCGTATCTCTCTTAGTTACGCTGCAATGCTGCGTCTGATATGTGTTGCTGTTAATCTTAGTAGCTCTGATTCATCTGACACCTCGATGAATAAATACAATTATCTATCTATTAT                    ]


>consensus_2794#0 AGCGGGTGATAGGAACCGCGACGCCATTGGCGCTTCTTCTGTCTTGGTGGTTGCCGTGCC TGCGCGCATCGATGGAGGGGTTCTGCTTCGCGCGGTGCCGCTTCACGCGGCTGGTGGTGG CGATGCAGCTGGTGATGGGCGTGCTCGTCATCTGCATCAGCATGGCCAGCCTCCACCGCT TCTACACCACCGACGCCCTCCTCCCCGGCGGGCTGGACGACCCCGCCCGCTGCGCCAGGT TCCACGGCGCCGTCGCCGGCGGGTACTCCGGCTTCGACATCCGCGCGCTGGCGGACCGCG TCGACGAGGTGCTCGTCCAGCTCGCCGAGCTGCAGGACAAGCTGGAGGCCACGGCGCTCA AGATCGGCAAGAAGACCAAGAAGAGGAAGGGGAAGGGGAAGCTGCAGCAGCAGGAGAACA TGACCATGACGGAGTTCCAGCGATTCCTGGAGGACGAGGTGATCCACCCGCTGTACGGCG CGCACATCGTGCTCCGGCTGATCCGCATCCCCCGCCCCGACCCCGACGGCGGCGCCCCGG CCGTCGACCCGCTGGTCAACTTCTTCGCCGCGGAGGAGACGCGCAAGTACGTGACGGCGA AGCGCAACCGCGAGGGGCGGCCGGGCGCGTACGGCGCGAACCGGACGTACGGCAGCATCG GGCACGCGTGCGTGGTGATGCGGCGGGAGCTGGACGAGTACATGAGCTACGACGTGGGCG CGCTCTGCCCCGACGACTGGGACCTCGGCCAGCGCCTGATGCTCGGCGGCTGCGACCCCC TCCCCCGGCGTCGCTGCCTCGCCCGCGCCTCCAAGCTGTTCCGCCGGCCGCTCCCCATCA ACGAGTCGCTGTGGGCGCTCCCCGACGACGGCAACGTCCGGTGGAGCCGCTACCACTGCC GCGGCTACCGGTGCCTGTCGGCCCGCAACCCGCGGCGCGGCTACGACCGGTGCGTGGGCT GCTTCGACATGGACAGGGAGAAGCAGCGGTGGATGCAGGGCAGCAACGGCACCACCCTGG CCGACTTCCGGATGGAGGAGGTGCTGGCGGTGAAGCCCGGGGAGATACGGGTGGGGCTGG ACGTGACGGTGGGGACGGGGAGCTTCGCGGCGAGGATGAGGGAGCGAGGGGTGACGGTGG TGACGACGGCGGTGAACCTGGGGGCGCCGTTCGCGGAGACGGTGGCGCTGCGTGGGCTGG TGGCGCTGTACGCCGGGCTGGGGCAGAGGCTGCCGCTGTTCGACAACAGCATGGACATGG TGCACACGGGCGGGGTGCTGGATGGTTGGGTGGACCTGCAGATGCTGGACTTCGTGCTCT TCGACTGGGACCGGGTGCTCCGCCCCGGTGGCCTCCTCTGGGTGGACAAGTTCGCCTGCG CGCGCAAGGACCTCGACGACTACATGTACATGTTCCTCCAGTTCCGCTACAAGAAGCACC GCTGGGTCGTCTCCTTCAAGTCCAGGGACGAGGTCTACCTCTCCGCCCTGCTCGAGAAGC CGCTACGCTCATGATCCACCAGCTCGTATCTCTCTTAGTTACGCTGCAATGCTGCGTCTG ATATGTGTTGCTGTTAATCTTAGTAGCTCTGATTCATCTGACACCTCGATGAATAAATAC AATTATCTATCTATTATATTATTAAAGAAATAGAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)