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Oryza sativa
cluster # 2797 cluster # 2797       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2797#0 length = 1254 sequences # 2  

consensusID : consensus_2797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1254
fasta sequence
                              [CGTGCACTACCTTCCCCATCGCCGGAGTCCGGCGACCCCGCCGCTTGCCGGCCCCTCGACCGATGGATCGGCCGTCCACGTGATGGATCCCTCGCAGGAAGAGCCCGCGCCACAGGTCGCCGCGGCCGAAGGGGCGGAGCCGAGACGGCGGCGGCCGGGGGCCGCGGTCCGCGGCGCCCTCGGGGTGGCCGCCCCCTTCGCGGCGTCATTCCTCTTCTCCTTCGTCGTCGGGCTCGCGGGTCTCGTCCTTGGTGGTCTCTCCTCCACCGCGTCCGTCTCCATGCCTTCCACCTGCCGGATCCTTTCCACCGGTGTTGATCTTAGGTCATCAAAAGTTTGTGAGCTCGGACTGTTGAACTATAGAGCTAAGCATGTATTTTACCCCTCGAGTAATAGAAAATTTCGATGCCATGATGACTACTATTGGGCTTCAGTCTTTGAGGTTGAATACACAGAATATTTTTCTGGTCAGACATCTTATGCGGTGGCAGAGGCCCCAAAGGAGGCTCTTCCGCTGAATTGCCGGCCTGACTTTGGTGTTGCATGGTCAACAACATTGAAGTTCAAGGTAAATGAATCGTATAGTTGCAGATACACATTGGGAAGTAGCAAGGCTGATATTTATTCAGATAGGCTGTTCAATTGCACCAGCGAAGAACCTTCAACAATTGAGATGCTCAAGAGGATATTTGTATTGTTATCGAAGTCCTATATGTTGGAGGATTTCAATTCCATTGGAATGCTTGGATACGTAGTGGCAGGGGTTGTGGCTGGTATTTTGAGTGCCTTACTCATCACTATCTTACTCAGAAGTCTCCGAGGACTAGTCCTTGCAGTTGTTGGGTCCAGTGTAAGCAAGCATAGCATCAGAGTGTTTGCCTGTCGGCTTAAGCGTGCCTGCCTTCTTGTAGCATATGTATCCGTTGTTGGCTGGATTACTTTGCAGTACAGCAAAATGATTGGATTGAAAGAACTTCTGTTAGATTATGAAATCATGGAGAGATTCTTGTAAACTATAGACGCTTGCGGCACTGTATATGATATCAGCCGATTCTGGTCCTTGAGGGAAGAAAATTTTCTTTATTTACATGTGTGCAGCCAGAAATGCTGCTGCCTTAACCATGCCGCGTGTTGCGGAGTATGAGGTCCCTTTTTGGGCTTAAAACTTAAAAGTCCTTTGAGCCGTCGAATCCTTTTTGTGGAGAAGCAATGGCTAGTAAGTTGTAACCTCTATCCAGTTCATATACTGGTAGT]

[+] EMBL AK072894             [CGTGCACTACCTTCCCCATCGCCGGAGTCCGGCGACCCCGCCGCTTGCCGGCCCCTCGACCGATGGATCGGCCGTCCACGTGATGGATCCCTCGCAGGAAGAGCCCGCGCCACAGGTCGCCGCGGCCGAAGGGGCGGAGCCGAGACGGCGGCGGCCGGGGGCCGCGGTCCGCGGCGCCCTCGGGGTGGCCGCCCCCTTCGCGGCGTCATTCCTCTTCTCCTTCGTCGTCGGGCTCGCGGGTCTCGTCCTTGGTGGTCTCTCCTCCACCGCGTCCGTCTCCATGCCTTCCACCTGCCGGATCCTTTCCACCGGTGTTGATCTTAGGTCATCAAAAGTTTGTGAGCTCGGACTGTTGAACTATAGAGCTAAGCATGTATTTTACCCCTCGAGTAATAGAAAATTTCGATGCCATGATGACTACTATTGGGCTTCAGTCTTTGAGGTTGAATACACAGAATATTTTTCTGGTCAGACATCTTATGCGGTGGCAGAGGCCCCAAAGGAGGCTCTTCCGCTGAATTGCCGGCCTGACTTTGGTGTTGCATGGTCAACAACATTGAAGTTCAAGGTAAATGAATCGTATAGTTGCAGATACACATTGGGAAGTAGCAAGGCTGATATTTATTCAGATAGGCTGTTCAATTGCACCAGCGAAGAACCTTCAACAATTGAGATGCTCAAGAGGATATTTGTATTGTTATCGAAGTCCTATATGTTGGAGGATTTCAATTCCATTGGAATGCTTGGATACGTAGTGGCAGGGGTTGTGGCTGGTATTTTGAGTGCCTTACTCATCACTATCTTACTCAGAAGTCTCCGAGGACTAGTCCTTGCAGTTGTTGGGTCCAGTGTAAGCAAGCATAGCATCAGAGTGTTTGCCTGTCGGCTTAAGCGTGCCTGCCTTCTTGTAGCATATGTATCCGTTGTTGGCTGGATTACTTTGCAGTACAGCAAAATGATTGGATTGAAAGAACTTCTGTTAGATTATGAAATCATGGAGAGATTCTTGTAAACTATAGACGCTTGCGGCACTGTATATGATATCAGCCGATTCTGGTCCTTGAGGGAAGAAAATTTTCTTTATTTACATGTGTGCAGCCAGAAATGCTGCTGCCTTAACCATGCCGCGTGTTGCGGAGTATGAGGTCCCTTTTTGGGCTTAAAACTTAAAAGTCCTTTGAGCCGTCGAATCCTTTTTGTGGAGAAGCAATGGCTAGTAAGTTGTAACCTCTATCCAGTTCATATACTGGTAGT]
[+] EMBL CA763919             [                                                                                                                                                                                                                                                                                                                                                                          GAGCTAAGCATGTATTTTACCCCTCGAGTAATAGAAAATTTCGATGCCATGATGACTACTATTGGGCTTCAGTCTTTGAGGTTGAATACACAGAATATTTTTCTGGTCAGACATCTTATGCGGTGGCAGAGGCCCCAAAGGAGGCTCTTCCGCTGAATTGCCGGCCTGACTTTGGTGTTGCATGGTCAACAACATTGAAGTTCAAGGTAAATGAATCGTATAGTTGCAGATACACATTGGGAAGTAGCAAGGCTGATATTTATTCAGATAGGCTGTTCAATTGCACCAGCGAAGAACCTTCAACAATTGAGATGCTCAAGAGGATATTTGTATTGTTATCGAAGTCCTATATGTTGGAGGATTTCAATTCCATTGGAATGCTTGGATACGTAATGGCAGGGGTTGTGGCTGGTATTTTGAGTGCCTTACTCATCACTATCTTACTCAGAAGTCTCCGAGGACTAGTCCTTGCAGTTGTTGGGTCCAGTGTAAGCAAGCATAGCATCAGAGTGTTTGCCTGTCGGCTTAAGCGTGCCTGCCTTCTTGTAGCATATGTATCCGNTGNTGGCTGGATTACTTTGCAGTACAGCAAAATGATTGGATTGAAAGAACTTCTGGTAGATTATGAAATCATGGAGAGATTCTTGNAAACTATAGACGCTTGCGGCACTGTATATGATATCAGCCGATTCTGGTCCTTGAGGGAAna                                                                                                                                                                                       ]


>consensus_2797#0 CGTGCACTACCTTCCCCATCGCCGGAGTCCGGCGACCCCGCCGCTTGCCGGCCCCTCGAC CGATGGATCGGCCGTCCACGTGATGGATCCCTCGCAGGAAGAGCCCGCGCCACAGGTCGC CGCGGCCGAAGGGGCGGAGCCGAGACGGCGGCGGCCGGGGGCCGCGGTCCGCGGCGCCCT CGGGGTGGCCGCCCCCTTCGCGGCGTCATTCCTCTTCTCCTTCGTCGTCGGGCTCGCGGG TCTCGTCCTTGGTGGTCTCTCCTCCACCGCGTCCGTCTCCATGCCTTCCACCTGCCGGAT CCTTTCCACCGGTGTTGATCTTAGGTCATCAAAAGTTTGTGAGCTCGGACTGTTGAACTA TAGAGCTAAGCATGTATTTTACCCCTCGAGTAATAGAAAATTTCGATGCCATGATGACTA CTATTGGGCTTCAGTCTTTGAGGTTGAATACACAGAATATTTTTCTGGTCAGACATCTTA TGCGGTGGCAGAGGCCCCAAAGGAGGCTCTTCCGCTGAATTGCCGGCCTGACTTTGGTGT TGCATGGTCAACAACATTGAAGTTCAAGGTAAATGAATCGTATAGTTGCAGATACACATT GGGAAGTAGCAAGGCTGATATTTATTCAGATAGGCTGTTCAATTGCACCAGCGAAGAACC TTCAACAATTGAGATGCTCAAGAGGATATTTGTATTGTTATCGAAGTCCTATATGTTGGA GGATTTCAATTCCATTGGAATGCTTGGATACGTAGTGGCAGGGGTTGTGGCTGGTATTTT GAGTGCCTTACTCATCACTATCTTACTCAGAAGTCTCCGAGGACTAGTCCTTGCAGTTGT TGGGTCCAGTGTAAGCAAGCATAGCATCAGAGTGTTTGCCTGTCGGCTTAAGCGTGCCTG CCTTCTTGTAGCATATGTATCCGTTGTTGGCTGGATTACTTTGCAGTACAGCAAAATGAT TGGATTGAAAGAACTTCTGTTAGATTATGAAATCATGGAGAGATTCTTGTAAACTATAGA CGCTTGCGGCACTGTATATGATATCAGCCGATTCTGGTCCTTGAGGGAAGAAAATTTTCT TTATTTACATGTGTGCAGCCAGAAATGCTGCTGCCTTAACCATGCCGCGTGTTGCGGAGT ATGAGGTCCCTTTTTGGGCTTAAAACTTAAAAGTCCTTTGAGCCGTCGAATCCTTTTTGT GGAGAAGCAATGGCTAGTAAGTTGTAACCTCTATCCAGTTCATATACTGGTAGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)