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Oryza sativa
cluster # 2838 cluster # 2838       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2838#0 length = 2204 sequences # 2  

consensusID : consensus_2838#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2204
fasta sequence
                              [ACTAGATGCCACTACGGCGGCTGCGGATCCGCACGCTCTCCACCGCTGCCGCCCACCACCCGTTCGACGGAATTCCCCACCCGTCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCTTCTCGGCCGCCGTCAGGGCGTCCGACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCGTAACCACCGGCCTCCACGGCTTCGCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCAAGACCGGGTCGTTCCCTTCCGCCGTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCAGCTCCTACAACACCATCCTCTCCGCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGTCGTGGATGCTCCGCTCCGGCGCCGTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTCTCGCTGGCCGCCGGCCGGGGGGAGGGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGCGGTCCGGGCTCGCGGCTGATGTGTTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTGGAGGGTCTCTCGGGGAGGCCAGGAGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCTCATGGAACGCGTTGATCTGCGGGCTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTGGCGTGTTCCTCCGGATGCTCAGGGACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCAGCGTGATCCCGGCATGTGGCGGCGAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCTTTGCGGTGAAGCTGGGCGTCGAGGGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGTACTACAAGTGCGGCGCTCCCGGCAGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCGACGTCGTGTCATGGACCACGGCCATCTCCATGGACAGCGAGGACGCCCTCACGCTGTTCAATGGCATGCGGCGAGACGGCGTGCCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGGCGCTGCCAGCGGACTGTCCGGCGAGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGGCCGCCGTGTCCGGCGAAGCGGCGGCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGCGTCGCATGGACGACGCGAGGATGGTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGTGGAACGCTGTGATCTCGGGCTACGCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCTTCTCGTCCATGGCCAGGTGCCTGACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCGCGGTGACCGCGGTGGAGACGGTGTCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTCTCAGCATGGGCTTCGGCGACAGCGAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGAAGCGTGGCAACTTGGAAGAGTCCCGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCATCGCCTGGACGGCGATCATCTCGGCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGAGCCTCTTCGGCGACATGGCGCGCTCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCGTCCTCACGGCCTGCCGGTACGGCGGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGATGGCTGCCGATCGCGGCGTCGAGCTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGTTAGGCCGGGCAGGGAGGCTGGCGGAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGCCGAGCGTGTCGGCGCTGCAGAGCTTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGATCGGCGAGAGGATCGCCAGAATTTTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACGTCCTCCTGTCGAACATCTACGCCGACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGAGGAAGATGAGGGACAGAGGCGTCAAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCGCTGGCGAGGCACTGCATTTGCACAAGTTTTCGTCGGACGACACGACGCATCCGCGTACAGAAGAGATATACGCAGTGGCCGATGTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTTCGCAAATGGAAATGATCTTGATCTGATACATCAGTATAAAATTA]

[+] EMBL AK109518             [ACTAGATGCCACTACGGCGGCTGCGGATCCGCACGCTCTCCACCGCTGCCGCCCACCACCCGTTCGACGGAATTCCCCACCCGTCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCTTCTCGGCCGCCGTCAGGGCGTCCGACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCGTAACCACCGGCCTCCACGGCTTCGCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCAAGACCGGGTCGTTCCCTTCCGCCGTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCAGCTCCTACAACACCATCCTCTCCGCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGTCGTGGATGCTCCGCTCCGGCGCCGTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTCTCGCTGGCCGCCGGCCGGGGGGAGGGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGCGGTCCGGGCTCGCGGCTGATGTGTTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTGGAGGGTCTCTCGGGGAGGCCAGGAGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCTCATGGAACGCGTTGATCTGCGGGCTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTGGCGTGTTCCTCCGGATGCTCAGGGACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCAGCGTGATCCCGGCATGTGGCGGCGAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCTTTGCGGTGAAGCTGGGCGTCGAGGGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGTACTACAAGTGCGGCGCTCCCGGCAGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCGACGTCGTGTCATGGACCACGGCCATCTCCATGGACAGCGAGGACGCCCTCACGCTGTTCAATGGCATGCGGCGAGACGGCGTGCCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGGCGCTGCCAGCGGACTGTCCGGCGAGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGGCCGCCGTGTCCGGCGAAGCGGCGGCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGCGTCGCATGGACGACGCGAGGATGGTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGTGGAACGCTGTGATCTCGGGCTACGCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCTTCTCGTCCATGGCCAGGTGCCTGACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCGCGGTGACCGCGGTGGAGACGGTGTCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTCTCAGCATGGGCTTCGGCGACAGCGAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGAAGCGTGGCAACTTGGAAGAGTCCCGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCATCGCCTGGACGGCGATCATCTCGGCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGAGCCTCTTCGGCGACATGGCGCGCTCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCGTCCTCACGGCCTGCCGGTACGGCGGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGATGGCTGCCGATCGCGGCGTCGAGCTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGTTAGGCCGGGCAGGGAGGCTGGCGGAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGCCGAGCGTGTCGGCGCTGCAGAGCTTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGATCGGCGAGAGGATCGCCAGAATTTTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACGTCCTCCTGTCGAACATCTACGCCGACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGAGGAAGATGAGGGACAGAGGCGTCAAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCGCTGGCGAGGCACTGCATTTGCACAAGTTTTCGTCGGACGACACGACGCATCCGCGTACAGAAGAGATATACGCAGTGGCCGATGTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTTCGCAAATGGAAATGATCTTGATCTGATACATCAGTATA      ]
[+] EMBL AK102790             [                              GCACGCTCTCCACCGCTGCCGCCCACCACCCGTTCGACGGAATTCCCCACCCGTCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCTTCTCGGCCGCCGTCAGGGCGTCCGACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCGTAACCACCGGCCTCCACGGCTTCGCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCAAGACCGGGTCGTTCCCTTCCGCCGTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCAGCTCCTACAACACCATCCTCTCCGCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGTCGTGGATGCTCCGCTCCGGCGCCGTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTATCGCTGGCCGCCGGCCGGGGGGAGGGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGCGGTCCGGGCTCGCGGCTGATGTGTTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTGGAGGGTCTCTCGGGGAGGCCAGGAGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCTCATGGAACGCGTTGATCTGCGGGCTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTGGCGTGTTCCTCCGGATGCTCAGGGACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCAGCGTGATCCCGGCATGTGGCGGCGAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCTTTGCGGTGAAGCTGGGCGTCGAGGGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGTACTACAAGTGCGGCGCTCCCGGCAGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCGACGTCGTGTCATGGACCACGGCCATCTCCATGGACGGCGAGGACGCCCTCACGCTGTTCAATGGCATGCGGCGAGACGGCGTGCCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGGCGCTGCCAGCGGACTGTCCGGCGAGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGGCCGCCGTGTCCGGCGAAGCGGCGGCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGCGTCGCATGGACGACGCGAGGATGGTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGTGGAACGCTGTGATCTCGGGCTACGCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCTTCTCGTCCATGGCCAGGTGCCTGACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCGCGGTGACCGCGGTGGAGACGGTGTCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTCTCAGCATGGGCTTCGGCGACAGCGAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGAAGCGTGGCAACTTGGAAGAGTCCCGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCATCGCCTGGACGGCGATCATCTCGGCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGAGCCTCTTCGGCGACATGGCGCGCTCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCGTCCTCACGGCCTGCCGGTACGGCGGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGATGGCTGCCGATCGCGGCGTCGAGCTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGTTAGGCCGGGCAGGGAGGCTGGCGGAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGCCGAGCGTGTCGGCGCTGCAGAGCTTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGATCGGCGAGAGGGTCGCCAGAATTTTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACGTCCTCCTGTCGAACATCTACGCCGACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGAGGAAGATGAGGGACAGAGGCGTCAAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCGCTGGCGAGGCACTGCATTTGCACAAGTTTTCGTCGGACGACACGACGCATCCGCGTACAGAAGAGATATACGCAGTGGCCGATGTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTTCGCAAATGGAAATGATCTTGATCTGATACATCAGTATAAAATTA]


>consensus_2838#0 ACTAGATGCCACTACGGCGGCTGCGGATCCGCACGCTCTCCACCGCTGCCGCCCACCACC CGTTCGACGGAATTCCCCACCCGTCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCT TCTCGGCCGCCGTCAGGGCGTCCGACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCG TAACCACCGGCCTCCACGGCTTCGCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCA AGACCGGGTCGTTCCCTTCCGCCGTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCA GCTCCTACAACACCATCCTCTCCGCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGT CGTGGATGCTCCGCTCCGGCGCCGTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTCT CGCTGGCCGCCGGCCGGGGGGAGGGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGC GGTCCGGGCTCGCGGCTGATGTGTTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTG GAGGGTCTCTCGGGGAGGCCAGGAGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCT CATGGAACGCGTTGATCTGCGGGCTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTG GCGTGTTCCTCCGGATGCTCAGGGACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCA GCGTGATCCCGGCATGTGGCGGCGAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCT TTGCGGTGAAGCTGGGCGTCGAGGGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGT ACTACAAGTGCGGCGCTCCCGGCAGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCG ACGTCGTGTCATGGACCACGGCCATCTCCATGGACAGCGAGGACGCCCTCACGCTGTTCA ATGGCATGCGGCGAGACGGCGTGCCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGG CGCTGCCAGCGGACTGTCCGGCGAGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGG CCGCCGTGTCCGGCGAAGCGGCGGCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGC GTCGCATGGACGACGCGAGGATGGTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGT GGAACGCTGTGATCTCGGGCTACGCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCT TCTCGTCCATGGCCAGGTGCCTGACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCG CGGTGACCGCGGTGGAGACGGTGTCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTC TCAGCATGGGCTTCGGCGACAGCGAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGA AGCGTGGCAACTTGGAAGAGTCCCGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCA TCGCCTGGACGGCGATCATCTCGGCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGA GCCTCTTCGGCGACATGGCGCGCTCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCG TCCTCACGGCCTGCCGGTACGGCGGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGA TGGCTGCCGATCGCGGCGTCGAGCTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGT TAGGCCGGGCAGGGAGGCTGGCGGAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGC CGAGCGTGTCGGCGCTGCAGAGCTTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGA TCGGCGAGAGGATCGCCAGAATTTTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACG TCCTCCTGTCGAACATCTACGCCGACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGA GGAAGATGAGGGACAGAGGCGTCAAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCG CTGGCGAGGCACTGCATTTGCACAAGTTTTCGTCGGACGACACGACGCATCCGCGTACAG AAGAGATATACGCAGTGGCCGATGTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTT CGCAAATGGAAATGATCTTGATCTGATACATCAGTATAAAATTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)