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Oryza sativa
cluster # 2898 cluster # 2898       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2898#0 length = 1473 sequences # 2  

consensusID : consensus_2898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1473
fasta sequence
                              [CACCCCCCTCCCCTCTCGCCCTCTCTCGCCTCCTCCTTCTCCTAGCAGCAACGCGCTGGCGGCGGGGGTGGCGGCGGCCTCTTCTCCAACGGAGGCGGCCCCTTCTCCAACGGAGGCGGTCCCCTTCTCTTTGAAGCGGCGGTGGCCCCTTCTTCCGGCAGCGGCAGCGGCCACAAGGAGGCAGCGGCGGCGGCCCCCTTCTCCTTGCAGCGGCAGCAGCCCCTTCTTCCGGCAGCGGCAGCGGCTGTAAGGAGGCATCAACGGTGGCCCCCTTATCCTTGCAGCGACGGCGGCCCCCTTCTTCCGGCAGCGGCAGCGGCCCCTTCTCCCAGCAATGGCAGTGGCCCCCTTCGCCGGCAGCGGCGGCGGTCCCCTCATCCAGATCCGGTGGAGGAAGCGAGAGGAGGCGGTGCTATGCACGGATAATTTTTGCTGTGTAATTTTTCCTCTTGTGGTTGA--ATGTGATGAAGTATGATTGATATGATCAAGAGGGGAGGAGAAGTGAAGCTAGCGCCCAGGAGGAGGGGGTGTGCGGCGCTTGCTTTTTTCCGCGTCCGATTATTTTCGCTCTTTTTTTTCGCGTCCGATTTTTTCTGCTATGACGAAAATCACTCTATTTTGTATTAAACGGACAAGGAAAACAACTTCAACTTTTTAAGTAGTAGAAATTATCTTAAAATACAGTAGAAATTTAAAGATACAAGTTTAACCTTATTTTCAAAGATTTTTTTGGCTTTGCCACTGCATCGACGACAATACCTACTCCTACCACATTCTACGTTTCCCAGCATTGTTTCTAACAGAACTAATACATTTATACATGTTATGACGGCCTAGCTGTTCATGGTCTGGGAGCAGTAGTAACTCAGCAAGTCACTGCCTTCTTTCATCAGGTTTTGCTTGATGTCTTGAACAGGAAGACATCTTCCCATCAAAAGAATTAAATTTGAAAATATATTGTTTGTTTTTTCTTAGAAATATTCGGGTTTTAAATTGTTTTGCACAAATATACGGTTGGTATCGCTCAACGGATGCACGAAAATGACGTGGGCTGATGATACTGACGATTGTCGCGTGACAACCGCATGAGACCGAGCGGTCTCGCACAACCGAGGGCTGATGATACTGACGGTGTCGCGTGACAACGGCACGAGACCGAGCGGTCTCGCACAACCGAAAAGCTACAACAGCTGAGCGAGACCGGCTATCTTGTTATCTGAGCTTTAATCAATCACTAATTAGGATGATTAATCATCAATTATTAATTAACTAATATTTAATCATGACAACTAATCACTAATTAATTATTTTTCAAAACGGTGTCGCTGTTTGGCAGTGCGAGACCGCGCGATCTCGCGTTAGACCGAGCGGTCTTGCTCAGTTACTGCGTGATACCATCGGTGTCGTCAACCCATATCATTTTCGCATATTTGTTGAGCGATACCGATGGTATATCTGTTAAATTGAAAAAAA]

[+] EMBL AK109555             [CACCCCCCTCCCCTCTCGCCCTCTCTCGCCTCCTCCTTCTCCTAGCAGCAACGCGCTGGCGGCGGGGGTGGCGGCGGCCTCTTCTCCAACGGAGGCGGCCCCTTCTCCAACGGAGGCGGTCCCCTTCTCTTTGAAGCGGCGGTGGCCCCTTCTTCCGGCAGCGGCAGCGGCCACAAGGAGGCAGCGGCGGCGGCCCCCTTCTCCTTGCAGCGGCAGCAGCCCCTTCTTCCGGCAGCGGCAGCGGCTGTAAGGAGGCATCAACGGTGGCCCCCTTATCCTTGCAGCGACGGCGGCCCCCTTCTTCCGGCAGCGGCAGCGGCCCCTTCTCCCAGCAATGGCAGTGGCCCCCTTCGCCGGCAGCGGCGGCGGTCCCCTCATCCAGATCCGGTGGAGGAAGCGAGAGGAGGCGGTGCTATGCACGGATAATTTTTGCTGTGTAATTTTTCCTCTTGTGGTTGA  ATGTGATGAAGTATGATTGATATGATCAAGAGGGGAGGAGAAGTGAAGCTAGCGCCCAGGAGGAGGGGGTGTGCGGCGCTTGCTTTTTTCCGCGTCCGATTATTTTCGCTCTTTTTTTTCGCGTCCGATTTTTTCTGCTATGACGAAAATCACTCTATTTTGTATTAAACGGACAAGGAAAACAACTTCAACTTTTTAAGTAGTAGAAATTATCTTAAAATACAGTAGAAATTTAAAGATACAAGTTTAACCTTATTTTCAAAGATTTTTTTGGCTTTGCCACTGCATCGACGACAATACCTACTCCTACCACATTCTACGTTTCCCAGCATTGTTTCTAACAGAACTAATACATTTATACATGTTATGACGGCCTAGCTGTTCATGGTCTGGGAGCAGTAGTAACTCAGCAAGTCACTGCCTTCTTTCATCAGGTTTTGCTTGATGTCTTGAACAGGAAGACATCTTCCCATCAAAAGAATTAAATTTGAAAATATATTGTTTGTTTTTTCTTAGAAATATTCGGGTTTTAAATTGTTTTGCACAAATATACGGTTGGTATCGCTCAACGGATGCACGAAAATGACGTGGGCTGATGATACTGACGATTGTCGCGTGACAACCGCATGAGACCGAGCGGTCTCGCACAACCGAGGGCTGATGATACTGACGGTGTCGCGTGACAACGGCACGAGACCGAGCGGTCTCGCACAACCGAAAAGCTACAACAGCTGAGCGAGACCGGCTATCTTGTTATCTGAGCTTTAATCAATCACTAATTAGGATGATTAATCATCAATTATTAATTAACTAATATTTAATCATGACAACTAATCACTAATTAATTATTTTTCAAAACGGTGTCGCTGTTTGGCAGTGCGAGACCGCGCGATCTCGCGTTAGACCGAGCGGTCTTGCTCAGTTACTGCGTGATACCATCGGTGTCGTCAACCCATATCATTTTCGCATATTTGTTGAGCGATACCGATGGTATATCTGTTAAATTGAAAAAAA]
[+] EMBL AK105218             [                     TCTCTCGCCTCCTCCTTCTCCTAGCAGCAACGCGCTGGCGGCGGGGGTGGCGGCGGCCTCTTCTCCAACGGAGGCGGCCCCTTCTCCAACGGAGGCGGTCCCCTTCTCTTTGAAGCGGCGGTGGCCCCTTCTTCCGGCAGCGGCAGCGGCCACAAGGAGGCAGCGGCGGCGGCCCCCTTCTCCTTGCAGCGGCAGCAGCCCCTTCTTCCGGCAGCGGCAGCGGCTGTAAGGAGGCATCAACGGTGGCCCCCTTATCCTTGCAGCGACGGCGGCCCCCTTCTTCCGGCAGCGGCAGCGGCCCCTTCTCCCAGCAATGGCAGTGGCCCCCTTCGCCGGCAGCGGCGGCGGTCCCCTCATCCAGATCCGGTGGAGGAAGCGAGAGGAGGCGGTGCTATGCACGGATAATTTTTGCTGTGTAATTTTTCCTCTTGTGGTTGAATATGTGATGAAGTATGATTGATATGATCAAGAGGGGAGGAGAAGTGAAGCTAGCGCCCAGGAGGAGGGGGTGTGCGGCGCTTGCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_2898#0 CACCCCCCTCCCCTCTCGCCCTCTCTCGCCTCCTCCTTCTCCTAGCAGCAACGCGCTGGC GGCGGGGGTGGCGGCGGCCTCTTCTCCAACGGAGGCGGCCCCTTCTCCAACGGAGGCGGT CCCCTTCTCTTTGAAGCGGCGGTGGCCCCTTCTTCCGGCAGCGGCAGCGGCCACAAGGAG GCAGCGGCGGCGGCCCCCTTCTCCTTGCAGCGGCAGCAGCCCCTTCTTCCGGCAGCGGCA GCGGCTGTAAGGAGGCATCAACGGTGGCCCCCTTATCCTTGCAGCGACGGCGGCCCCCTT CTTCCGGCAGCGGCAGCGGCCCCTTCTCCCAGCAATGGCAGTGGCCCCCTTCGCCGGCAG CGGCGGCGGTCCCCTCATCCAGATCCGGTGGAGGAAGCGAGAGGAGGCGGTGCTATGCAC GGATAATTTTTGCTGTGTAATTTTTCCTCTTGTGGTTGAATGTGATGAAGTATGATTGAT ATGATCAAGAGGGGAGGAGAAGTGAAGCTAGCGCCCAGGAGGAGGGGGTGTGCGGCGCTT GCTTTTTTCCGCGTCCGATTATTTTCGCTCTTTTTTTTCGCGTCCGATTTTTTCTGCTAT GACGAAAATCACTCTATTTTGTATTAAACGGACAAGGAAAACAACTTCAACTTTTTAAGT AGTAGAAATTATCTTAAAATACAGTAGAAATTTAAAGATACAAGTTTAACCTTATTTTCA AAGATTTTTTTGGCTTTGCCACTGCATCGACGACAATACCTACTCCTACCACATTCTACG TTTCCCAGCATTGTTTCTAACAGAACTAATACATTTATACATGTTATGACGGCCTAGCTG TTCATGGTCTGGGAGCAGTAGTAACTCAGCAAGTCACTGCCTTCTTTCATCAGGTTTTGC TTGATGTCTTGAACAGGAAGACATCTTCCCATCAAAAGAATTAAATTTGAAAATATATTG TTTGTTTTTTCTTAGAAATATTCGGGTTTTAAATTGTTTTGCACAAATATACGGTTGGTA TCGCTCAACGGATGCACGAAAATGACGTGGGCTGATGATACTGACGATTGTCGCGTGACA ACCGCATGAGACCGAGCGGTCTCGCACAACCGAGGGCTGATGATACTGACGGTGTCGCGT GACAACGGCACGAGACCGAGCGGTCTCGCACAACCGAAAAGCTACAACAGCTGAGCGAGA CCGGCTATCTTGTTATCTGAGCTTTAATCAATCACTAATTAGGATGATTAATCATCAATT ATTAATTAACTAATATTTAATCATGACAACTAATCACTAATTAATTATTTTTCAAAACGG TGTCGCTGTTTGGCAGTGCGAGACCGCGCGATCTCGCGTTAGACCGAGCGGTCTTGCTCA GTTACTGCGTGATACCATCGGTGTCGTCAACCCATATCATTTTCGCATATTTGTTGAGCG ATACCGATGGTATATCTGTTAAATTGAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)