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Oryza sativa
cluster # 2932 cluster # 2932       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2932#0 length = 1747 sequences # 2  

consensusID : consensus_2932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1747
fasta sequence
                              [GTTGCAGCAGGAGAGGGGATAAGAATCACAGATTCCCATCACCTCAAATCCACCCCCATGAAAAGCCGCATTAGCTGAGCAATTTATCAGTGTTGCACTGTACTCCTCTCCTAATTAAGATCGTGTCATGCTTCCTTACATTCCTTGGCATTTGTCAGTGTTGTTGTCATTGTCGTTGTCATCATCATCATACATCCTCTCTCTGAACTTCTCTTCTCTTCTCTGAACACTGTCTGGTAGCTTCATACACCTTGGCTTGGCTCTTGGCTCTCTGCTTCTCCTACAGCTCAACGACACGACATGCCATTCCTTCTTCCTTGAGATCGAGGAGAGAATTGAGATAAGTCGATAAGAAGAAGAAGAAGAAGGGTCTTGTCTCCTCTTGTTTCTATATGGGAATCAGGCGGCGGTCAGAGAGGTTGCTAAGGGCAATGGCGTGCTGCAGGATAGTTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGTCTGCGTCTTGGTGGCGACGACAACGACGATGGATGCTGTGAAGGGTACGAGTGCTGCGGCCGCTGGCGGCGGCGGCGGCGGGAGGTGGACGGAGTTGACGGCGGGGTCGCCGGCGAGGTACTCGGCCGGTGCAGACGAGTTCAGAGGCAGCAAGAGGAGGATCCCCAAGGGGCCTGACCCTATTCACAACAGGCGTGCCGGGAAGACGACGGTTGCGCCGCGGCGGAGAGACTAGCCGGAGAAGAAGAAGAAAGCCCTTCTTCCAGTGAGCATCTGGATGAGACTGAAGGAGCTATATGATGTGCACTAGCCAGCTCTACCGGCAATGCATAAGATGGAGGATCATTGGCTTTGTGCAAAGAGGTAGCTAGCTTCTCCTTTACTGAAGAGGATTTTGGTAGTGGGGGTATGTACAAAAGTTGCAATCTTCCCTCTCAAGAAATCTGCCATTTTTTTGACCAATCTTTCGCATATTCTTCCATGATTTGATTTGAATCTATGGTGATTCCTCTTTTTTCTTTCTTTCTTTCCCTTTTTTCTTGTGTGTAATTAAGAAGCCAGAGATGCCGAATTGGCCATCATTCTCTTGCCAAGAGTCCCTTCTGTTCTTATTGTCAGTATAGGTTCAGACTTCAGAGCGGCCAACCTGACAAGCTGTTCGATGATGTATATTCAACTCAGTTCGTGTGTGTGTGTGTGTGAACAATTCATTGTTGTTTTGCAATTTCACTGCATCAAATGTTACTATTCATCAAAAGTGAAATTCCTCAACAAAAAAAAAAGAGAAAAAAAAATCTGCACTGCATGGTATGACGCATGAATCATCTGAAGCGATAGGGGAAAGCAAAAGAGGAGCAGGAAATGAGAGAAGCAGGGAAACTAAAGCTAACTGGGAGAAGTATGGTCGGCTTGTGTTTGTGTGTGTCTCTGCGTGGTGCTTTTCCTTTTTTTACTTCTTTTGTTGCAGGGGTGCTATTTTTTTGAAGTAACCGAGGAGCAGCAAGAAAAAGAATACAAAAGAAAAGAAACATGTTGCTGTATGAGTGAAGTGTGAAGAAGCCAGCTTAGCATTGCTTATTGATCAGCAGGCACAGAAGAAAAGGGAAAATGTTGCTAATTTCTCAACAAACATAAGAAGTGTGAAAAATTGATATTTTTTTTTCAGACTTGTAGTAATTTGCTAAAATTTTGAGGGTGAACACTGCTAGTACTTTATTCGACTACAAATATGTGATTACAATATTCCTCAAGAAAAGAAAC]

[+] EMBL AK105820             [GTTGCAGCAGGAGAGGGGATAAGAATCACAGATTCCCATCACCTCAAATCCACCCCCATGAAAAGCCGCATTAGCTGAGCAATTTATCAGTGTTGCACTGTACTCCTCTCCTAATTAAGATCGTGTCATGCTTCCTTACATTCCTTGGCATTTGTCAGTGTTGTTGTCATTGTCGTTGTCATCATCATCATACATCCTCTCTCTGAACTTCTCTTCTCTTCTCTGAACACTGTCTGGTAGCTTCATACACCTTGGCTTGGCTCTTGGCTCTCTGCTTCTCCTACAGCTCAACGACACGACATGCCATTCCTTCTTCCTTGAGATCGAGGAGAGAATTGAGATAAGTCGATAAGAAGAAGAAGAAGAAGGGTCTTGTCTCCTCTTGTTTCTATATGGGAATCAGGCGGCGGTCAGAGAGGTTGCTAAGGGCAATGGCGTGCTGCAGGATAGTTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGTCTGCGTCTTGGTGGCGACGACAACGACGATGGATGCTGTGAAGGGTACGAGTGCTGCGGCCGCTGGCGGCGGCGGCGGCGGGAGGTGGACGGAGTTGACGGCGGGGTCGCCGGCGAGGTACTCGGCCGGTGCAGACGAGTTCAGAGGCAGCAAGAGGAGGATCCCCAAGGGGCCTGACCCTATTCACAACAGGCGTGCCGGGAAGACGACGGTTGCGCCGCGGCGGAGAGACTAGCCGGAGAAGAAGAAGAAAGCCCTTCTTCCAGTGAGCATCTGGATGAGACTGAAGGAGCTATATGATGTGCACTAGCCAGCTCTACCGGCAATGCATAAGATGGAGGATCATTGGCTTTGTGCAAAGAGGTAGCTAGCTTCTCCTTTACTGAAGAGGATTTTGGTAGTGGGGGTATGTACAAAAGTTGCAATCTTCCCTCTCAAGAAATCTGCCATTTTTTTGACCAATCTTTCGCATATTCTTCCATGATTTGATTTGAATCTATGGTGATTCCTCTTTTTTCTTTCTTTCTTTCCCTTTTTTCTTGTGTGTAATTAAGAAGCCAGAGATGCCGAATTGGCCATCATTCTCTTGCCAAGAGTCCCTTCTGTTCTTATTGTCAGTATAGGTTCAGACTTCAGAGCGGCCAACCTGACAAGCTGTTCGATGATGTATATTCAACTCAGTTCGTGTGTGTGTGTGTGTGAACAATTCATTGTTGTTTTGCAATTTCACTGCATCAAATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK106936             [                                                                                                                                                                                                                                                             GGCTTGGCTCTTGGCTCTCTGCTTCTCCTACAGCTCAACGACACGACATGCCATTCCTTCTTCCTTGAGATCGAGGAGAGAATTGAGATAAGTCGATAAGAAGAAGAAGAAGAAGGGTCTTGTCTCCTCTTGTTTCTATATGGGAATCAGGCGGCGGTCAGAGAGGTTGCTAAGGGCAATGGCGTGCTGCAGGATAGTTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGTCTGCGTCTTGGTGGCGACGACAACGACGATGGATGCTGTGAAGGGTACGAGTGCTGCGGCCGCTGGCGGCGGCGGCGGCGGGAGGTGGACGGAGTTGACGGCGGGGTCGCCGGTGAGGTACTCGGCCGGTGCAGACGAGTTCAGAGGCAGCAAGAGGAGGATCCCCAAGGGGCCTGACCCTATTCACAACAGGCGTGCCGGGAAGACGACGGTTGCGCCGCGGCGGAGAGACTAGCCGGAGAAGAAGAAGAAAGCCCTTCTTCCAGTGAGCATCTGGATGAGACTGAAGGAGCTATATGATGTGCACTAGCCAGCTCTACCGGCAATGCATAAGATGGAGGATCATTGGCTTTGTGCAAAGAGGTAGCTAGCTTCTCCTTTACTGAAGAGGATTTTGGTAGTGGGGGTATGTACAAAAGTTGCAATCTTCCCTCTCAAGAAATCTGCCATTTTTTTGACCAATCTTTCGCATATTCTTCCATGATTTGATTTGAATCTATGGTGATTCCTCTTTTTTCTTTCTTTCTTTCCCTTTTTTCTTGTGTGTAATTAAGAAGCCAGAGATGCCGAATTGGCCATCATTCTCTTGCCAAGAGTCCCTTCTGTTCTTATTGTCAGTATAGGTTCAGACTTCAGAGCGGCCAACCTAACAAGCTGTTCGATGATGTATATTCAACTCAGTTCGTGTGTGTGTGTGTGTGAACAATTCATTGTTGTTTTGCAATTTCACTGCATCAAATGTTACTATTCATCAAAAGTGAAATTCCTCAACAAAAAAAAAAGAGAAAAAAAAATCTGCACTGCATGGTATGACGCATGAATCATCTGAAGCGATAGGGGAAAGCAAAAGAGGAGCAGGAAATGAGAGAAGCAGGGAAACTAAAGCTAACTGGGAGAAGTATGGTCGGCTTGTGTTTGTGTGTGTCTCTGCGTGGTGCTTTTCCTTTTTTTACTTCTTTTGTTGCAGGGGTGCTATTTTTTTGAAGTAACCGAGGAGCAGCAAGAAAAAGAATACAAAAGAAAAGAAACATGTTGCTGTATGAGTGAAGTGTGAAGAAGCCAGCTTAGCATTGCTTATTGATCAGCAGGCACAGAAGAAAAGGGAAAATGTTGCTAATTTCTCAACAAACATAAGAAGTGTGAAAAATTGATATTTTTTTTTCAGACTTGTAGTAATTTGCTAAAATTTTGAGGGTGAACACTGCTAGTACTTTATTCGACTACAAATATGTGATTACAATATTCCTCAAGAAAAGAAAC]


>consensus_2932#0 GTTGCAGCAGGAGAGGGGATAAGAATCACAGATTCCCATCACCTCAAATCCACCCCCATG AAAAGCCGCATTAGCTGAGCAATTTATCAGTGTTGCACTGTACTCCTCTCCTAATTAAGA TCGTGTCATGCTTCCTTACATTCCTTGGCATTTGTCAGTGTTGTTGTCATTGTCGTTGTC ATCATCATCATACATCCTCTCTCTGAACTTCTCTTCTCTTCTCTGAACACTGTCTGGTAG CTTCATACACCTTGGCTTGGCTCTTGGCTCTCTGCTTCTCCTACAGCTCAACGACACGAC ATGCCATTCCTTCTTCCTTGAGATCGAGGAGAGAATTGAGATAAGTCGATAAGAAGAAGA AGAAGAAGGGTCTTGTCTCCTCTTGTTTCTATATGGGAATCAGGCGGCGGTCAGAGAGGT TGCTAAGGGCAATGGCGTGCTGCAGGATAGTTCTTGTCTTCTTCTTCTTCTTCTTCTTCT TCTGCGTCTGCGTCTTGGTGGCGACGACAACGACGATGGATGCTGTGAAGGGTACGAGTG CTGCGGCCGCTGGCGGCGGCGGCGGCGGGAGGTGGACGGAGTTGACGGCGGGGTCGCCGG CGAGGTACTCGGCCGGTGCAGACGAGTTCAGAGGCAGCAAGAGGAGGATCCCCAAGGGGC CTGACCCTATTCACAACAGGCGTGCCGGGAAGACGACGGTTGCGCCGCGGCGGAGAGACT AGCCGGAGAAGAAGAAGAAAGCCCTTCTTCCAGTGAGCATCTGGATGAGACTGAAGGAGC TATATGATGTGCACTAGCCAGCTCTACCGGCAATGCATAAGATGGAGGATCATTGGCTTT GTGCAAAGAGGTAGCTAGCTTCTCCTTTACTGAAGAGGATTTTGGTAGTGGGGGTATGTA CAAAAGTTGCAATCTTCCCTCTCAAGAAATCTGCCATTTTTTTGACCAATCTTTCGCATA TTCTTCCATGATTTGATTTGAATCTATGGTGATTCCTCTTTTTTCTTTCTTTCTTTCCCT TTTTTCTTGTGTGTAATTAAGAAGCCAGAGATGCCGAATTGGCCATCATTCTCTTGCCAA GAGTCCCTTCTGTTCTTATTGTCAGTATAGGTTCAGACTTCAGAGCGGCCAACCTGACAA GCTGTTCGATGATGTATATTCAACTCAGTTCGTGTGTGTGTGTGTGTGAACAATTCATTG TTGTTTTGCAATTTCACTGCATCAAATGTTACTATTCATCAAAAGTGAAATTCCTCAACA AAAAAAAAAGAGAAAAAAAAATCTGCACTGCATGGTATGACGCATGAATCATCTGAAGCG ATAGGGGAAAGCAAAAGAGGAGCAGGAAATGAGAGAAGCAGGGAAACTAAAGCTAACTGG GAGAAGTATGGTCGGCTTGTGTTTGTGTGTGTCTCTGCGTGGTGCTTTTCCTTTTTTTAC TTCTTTTGTTGCAGGGGTGCTATTTTTTTGAAGTAACCGAGGAGCAGCAAGAAAAAGAAT ACAAAAGAAAAGAAACATGTTGCTGTATGAGTGAAGTGTGAAGAAGCCAGCTTAGCATTG CTTATTGATCAGCAGGCACAGAAGAAAAGGGAAAATGTTGCTAATTTCTCAACAAACATA AGAAGTGTGAAAAATTGATATTTTTTTTTCAGACTTGTAGTAATTTGCTAAAATTTTGAG GGTGAACACTGCTAGTACTTTATTCGACTACAAATATGTGATTACAATATTCCTCAAGAA AAGAAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)