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Oryza sativa
cluster # 295 cluster # 295       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_295#0 length = 1610 sequences # 2  

consensusID : consensus_295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1610
fasta sequence
                              [TTGAGTGGACCCTGTCCTATGACAAACTTTTCCAGATTAGGTGTAATTAGTTTGAGGTAATGCAAACAGCGAACATTGCTTAGAGCAGCAAGAACATCCCTGTTGAGCTTATCAGAGGATGATAGACACAGCTCAGTAAGACCTTTCAGCAAGGTTACAAATGGAGGTAATATGTTTATTTTGCCTTTTAGCTTCAGAGAGCTTAAGTAGCAGGAATCTTCCAGGGAAAACTTCAGCATATTCTCTTGGTCTTGGAAGCACCCCCCAAAATTCAGAGAAAGCGAGCGGACATCGTTCATATTGGTGCCCCTCTGGATGAAAACTTGAATGGCCTTTGAAAGGTGAATAGTGTTGCTGCTAGAATTGGAAGGGGTCTCGCTCTCGCACCATATTTTAACCTTGGCCAAGTTTTTCATATGATCAATGAGTTGAGGAAATCCTTGGTCATTATTGGCAAAAAATCCCGCTAGTGTCTCCAGCTTACTTTTCTCAGACAGATACTTCTGTAGCTTGCTAATTTTCTGGCCTACATCTTGAAGTTTGAAATTTCCAAATAGATGTGTCAAGCATGGCAGCTTGATGACTTGTATGGGCAGAACTTTTATCTTTGTTCTTCGTACATCGAGTGTCTCCAAAAATTTCAGTTTTGTGATCTCCTTTGGGAGCATTGTAACAGTGCCCCCAAGGCTTAAATACCTGAGCAGTAACAGCTTGCATATCTTCCTGAGATGTTCATCTTTCAAATTTTCACATTCTTCAAGATCCAAAACTCTCAGTAGTTCATAACTGGAGAATTCTAAAACAGAGTCTTCTGCCTCTCCGAAGATTGTCAAAGACCGAACATGAGATAAATCAATGTCTGAGTTCATTCTGCCCCTTCTGGTGCTGTTATGTTGCATAGTAAGGCAACGTATTTTGTCAGGCAGGCAAGCTTGATCATATAGCAACGTAATGAAGTCATCGCACATGGACTTATGCAGGATGAACTCAAGCATCATGCCGTGAGTTTGGCATGTCTTCACCTCAGTGTTACTGCTCGTAGCAACAGGCTGAATGATGCTCCGGTTGATCAGCTCGTTGAAGTAGT-CTGTAGCAACATCCAGAGAACTTCGGAGAGGGTCT-GCCTCAACAAG-CCCTTCAGCTGACCATCGCCTTATCA-GTTTTCCTCTCCT-GACCGGATGGCCACTGGGGAAAATACCAAAATAGAG-CAAG-CAGGCCTTGATAACATGGCCAGGAAGGCTGGTATAGTTGTGAACAAGTACATGCTTCATTCTTTCTAAAGTATCCTCTCTTTCCAGATGCATACCCAGATTGCCACACAACTTTGCATATTCTTGTGGTAGCTGTTGACCTTTACTTTTCAAGAATTGGGCTGTTGATACAAGGGCAAGTGGTAAACCATCACATTTAGTACTCAGCACTGTTTCTGAACCAGAGCTGCAGGCATTTGCTATGGAATGGATGGCCGTCGTCACCAGCACTATGCTGCTTGATCCTGTATCTACAGGGAAAGCATCTTTTATAGTACTGTTCCAATATTCCCTCTGGATGTCATCAATTACAATGAAGAACCTATAGAGATGTATTTAGAAATAAGGTAAATGGATCAG]

[+] EMBL AK064471             [TTGAGTGGACCCTGTCCTATGACAAACTTTTCCAGATTAGGTGTAATTAGTTTGAGGTAATGCAAACAGCGAACATTGCTTAGAGCAGCAAGAACATCCCTGTTGAGCTTATCAGAGGATGATAGACACAGCTCAGTAAGACCTTTCAGCAAGGTTACAAATGGAGGTAATATGTTTATTTTGCCTTTTAGCTTCAGAGAGCTTAAGTAGCAGGAATCTTCCAGGGAAAACTTCAGCATATTCTCTTGGTCTTGGAAGCACCCCCCAAAATTCAGAGAAAGCGAGCGGACATCGTTCATATTGGTGCCCCTCTGGATGAAAACTTGAATGGCCTTTGAAAGGTGAATAGTGTTGCTGCTAGAATTGGAAGGGGTCTCGCTCTCGCACCATATTTTAACCTTGGCCAAGTTTTTCATATGATCAATGAGTTGAGGAAATCCTTGGTCATTATTGGCAAAAAATCCCGCTAGTGTCTCCAGCTTACTTTTCTCAGACAGATACTTCTGTAGCTTGCTAATTTTCTGGCCTACATCTTGAAGTTTGAAATTTCCAAATAGATGTGTCAAGCATGGCAGCTTGATGACTTGTATGGGCAGAACTTTTATCTTTGTTCTTCGTACATCGAGTGTCTCCAAAAATTTCAGTTTTGTGATCTCCTTTGGGAGCATTGTAACAGTGCCCCCAAGGCTTAAATACCTGAGCAGTAACAGCTTGCATATCTTCCTGAGATGTTCATCTTTCAAATTTTCACATTCTTCAAGATCCAAAACTCTCAGTAGTTCATAACTGGAGAATTCTAAAACAGAGTCTTCTGCCTCTCCGAAGATTGTCAAAGACCGAACATGAGATAAATCAATGTCTGAGTTCATTCTGCCCCTTCTGGTGCTGTTATGTTGCATAGTAAGGCAACGTATTTTGTCAGGCAGGCAAGCTTGATCATATAGCAACGTAATGAAGTCATCGCACATGGACTTATGCAGGATGAACTCAAGCATCATGCCGTGAGTTTGGCATGTCTTCACCTCAGTGTTACTGCTCGTAGCAACAGGCTGAATGATGCTCCGGTTGATCAGCTCGTTGAAGTAGT CTGTAGCAACATCCAGAGAACTTCGGAGAGGGTCT GCCTCAACAAG CCCTTCAGCTGACCATCGCCTTATCA GTTTTCCTCTCCT GACCGGATGGCCACTGGGGAAAATACCAAAATAGAG CAAG CAGGCCTTGATAACATGGCCAGGAAGGCTGGTATAGTTGTGAACAAGTACATGCTTCATTCTTTCTAAAGTATCCTCTCTTTCCAGATGCATACCCAGATTGCCACACAACTTTGCATATTCTTGTGGTAGCTGTTGACCTTTACTTTTCAAGAATTGGGCTGTTGATACAAGGGCAAGTGGTAAACCATCACATTTAGTACTCAGCACTGTTTCTGAACCAGAGCTGCAGGCATTTGCTATGGAATGGATGGCCGTCGTCACCAGCACTATGCTGCTTGATCCTGTATCTACAGGGAAAGCATCTTTTATAGTACTGTTCCAATATTCCCTCTGGATGTCATCAATTACAATGAAGAACCTATAGAGATGTATTTAGAAATAAGGTAAATGGATCAG]
[+] EMBL CA764811             [                                                                                                                                                                                                                                                                                                                                                                                                                                           aagggGGAAATCCTTGGTCNTTATTGGCAAAAAATCCCGCTAGTGTCTCCAGCTTACTTTTCTCAGACAGATACTTCTGTAGCTTGCTAATTTTCTGGCCTACATCTTGAAGTTTGAAATTTCCAAATAGATGTGTCAAGCATGGCAGCTTGATGACTTGTATGGGCAGAACTTTTATCTTCGTTCTTCGTACATCGAGTGTCTCCAAAAATTTCAGTTTTGTGATCTCCTTTGGGAGCATTGTAACAGTGCCCCCAAGGCTTAAATACCTGAGCAGCAACAGCTTGCATATCTTCCTGAGATGTTCATCTTTCAAATTTTCACATTCTTCAAGATCCAAAACTCTCAGTAGTTCATAACTGGAGAATTCTAAAACAGAGTCTTCTGCCTCTCCGAAGATTGTCAAAGACCGAACATGAGATAAATCAATGTTTGAGTTCATTCTGCCCCTTCTGGTGCTGTTATGTTGCACAGTAAGGCAACGTATTTTGTCAGGCAGGCAAGCTTGATCATATAGCAACGTAATGAAGTCATCGCACATGGACCTATGCAGGATGAACTCAAGCATCATGCCGTGAGTTTGGCATGTCTTCACCTCAGTGNTACTGCTCGTAGCAACAGGCCGAATGATGCTCCGGTTGATCAGCTCGNTGAAGTAGTCCTGTAGCAACATCCAGAGAACTTCGGAGAGGGTCTGGCCTCAACAAGNCCCTTCAGCTGACCATCGNCTTATCAGGTTTTCCTCTNCTGGACCGGATGGCCACTGGGGNAAATACCCAAATAGAGCCAAGCCAGGCCTTGGTAACc                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_295#0 TTGAGTGGACCCTGTCCTATGACAAACTTTTCCAGATTAGGTGTAATTAGTTTGAGGTAA TGCAAACAGCGAACATTGCTTAGAGCAGCAAGAACATCCCTGTTGAGCTTATCAGAGGAT GATAGACACAGCTCAGTAAGACCTTTCAGCAAGGTTACAAATGGAGGTAATATGTTTATT TTGCCTTTTAGCTTCAGAGAGCTTAAGTAGCAGGAATCTTCCAGGGAAAACTTCAGCATA TTCTCTTGGTCTTGGAAGCACCCCCCAAAATTCAGAGAAAGCGAGCGGACATCGTTCATA TTGGTGCCCCTCTGGATGAAAACTTGAATGGCCTTTGAAAGGTGAATAGTGTTGCTGCTA GAATTGGAAGGGGTCTCGCTCTCGCACCATATTTTAACCTTGGCCAAGTTTTTCATATGA TCAATGAGTTGAGGAAATCCTTGGTCATTATTGGCAAAAAATCCCGCTAGTGTCTCCAGC TTACTTTTCTCAGACAGATACTTCTGTAGCTTGCTAATTTTCTGGCCTACATCTTGAAGT TTGAAATTTCCAAATAGATGTGTCAAGCATGGCAGCTTGATGACTTGTATGGGCAGAACT TTTATCTTTGTTCTTCGTACATCGAGTGTCTCCAAAAATTTCAGTTTTGTGATCTCCTTT GGGAGCATTGTAACAGTGCCCCCAAGGCTTAAATACCTGAGCAGTAACAGCTTGCATATC TTCCTGAGATGTTCATCTTTCAAATTTTCACATTCTTCAAGATCCAAAACTCTCAGTAGT TCATAACTGGAGAATTCTAAAACAGAGTCTTCTGCCTCTCCGAAGATTGTCAAAGACCGA ACATGAGATAAATCAATGTCTGAGTTCATTCTGCCCCTTCTGGTGCTGTTATGTTGCATA GTAAGGCAACGTATTTTGTCAGGCAGGCAAGCTTGATCATATAGCAACGTAATGAAGTCA TCGCACATGGACTTATGCAGGATGAACTCAAGCATCATGCCGTGAGTTTGGCATGTCTTC ACCTCAGTGTTACTGCTCGTAGCAACAGGCTGAATGATGCTCCGGTTGATCAGCTCGTTG AAGTAGTCTGTAGCAACATCCAGAGAACTTCGGAGAGGGTCTGCCTCAACAAGCCCTTCA GCTGACCATCGCCTTATCAGTTTTCCTCTCCTGACCGGATGGCCACTGGGGAAAATACCA AAATAGAGCAAGCAGGCCTTGATAACATGGCCAGGAAGGCTGGTATAGTTGTGAACAAGT ACATGCTTCATTCTTTCTAAAGTATCCTCTCTTTCCAGATGCATACCCAGATTGCCACAC AACTTTGCATATTCTTGTGGTAGCTGTTGACCTTTACTTTTCAAGAATTGGGCTGTTGAT ACAAGGGCAAGTGGTAAACCATCACATTTAGTACTCAGCACTGTTTCTGAACCAGAGCTG CAGGCATTTGCTATGGAATGGATGGCCGTCGTCACCAGCACTATGCTGCTTGATCCTGTA TCTACAGGGAAAGCATCTTTTATAGTACTGTTCCAATATTCCCTCTGGATGTCATCAATT ACAATGAAGAACCTATAGAGATGTATTTAGAAATAAGGTAAATGGATCAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)