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Oryza sativa
cluster # 2953 cluster # 2953       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2953#0 length = 2312 sequences # 2  

consensusID : consensus_2953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2312
fasta sequence
                              [CGGATCGAGGGCATTTCTCATACAATGGAGAAGCTATCAGAGAAAAACGTATTCCTGGAAAATTTGTTATCTGAAAACAATACCGAGCTTGAGATCCTCAGAAGGAAGCTGAATGACTCGGAAGAGTCCACACATGCACTACTTAATCAGAATTCTGTACTTCGATCTGAAAAGAGAACCCTTGTGCGTGAGGTGGATAGCATGAATGGTGCCCTACTCAATCTGGAGGCCCAGTTCACGGAGTTAGAAGGACACCACCTGGATCTTCAGCAGGAGAAAAACAAGGCAAGCAGTGAAGTGATCATGCTACAGGAGATGTTAAGGCTTGAGAGAGAGGCGCACAAAGAACTGAACTACTCAGGCAAGACTCAGTTCAGTGCTGTACAGAAGCAGTTAAGCTTCCTGCTCGAAGAAGGCCGTCGTAGGGAGAACCAGCTTCAAGATGAGGAGCATAAGATTGTTGAAGCTCAGATGGAGATTTTCGTCTTGCAGAAGTGCTTAGGTGACATGGCAGAGGCAAATTCTGATGTCTCAGGGCAACTGCAGAAGCAGAAAGAGCTATGCGAAATCCAGGAGGAGAAATTAACCTTTTTGACAGAAAACAACCAGAGGTTAACGGAAGGAATTGGTTCTGTGATGGAAGAACTACATTTGGATGATAAATATGGATCATTGGATCTAATGAAGCTTGATGTAATCGTGCAGCTCATCTTGCATGAGATCAAGTGCTTGCTGAATACTATTTCTGATGCTCAGGACGTGAAGCAAAACCAGATCCTCGAGAAGTCTCTTGTCGTCACGCTTTTGGAGCACTTTGGACGCGAGGTGGCTGATCTAAGGTCAGAGAGGAGTGTTCTGAGGCAAGAGTGGCAGGCGAAGAGCGAAGAGCTTCTGCAGCTGCAAAATGAAAGGCACGACCTCATGAAGATCAGCTGCGAGTTACGGAAGGAGATGGAGGCTCGTAACCGTAGGGTTGAGGAGATGAAAGGTGAGGCAAAATTCTTGGTTCGACAACTCTCAGAGCTGCAAGAGTCGCGGCAGTCATTGCAAGCTGAAGTCATCAAGCTGATTGAAGAGAACTCCTCACTGTCAGGCAAACTTTATGACTCCAGGGAGAAAGAGAAGACGGCCAACGATGATTTCAATACTCTCCTTGGTGAAGCAATCAGTACAGACATCCTCGGTGTCGTTTTCAAAAGTCTTCATGATGAGAGGACATCTCAGCTGCAGTCTTTGCATGAAGATTTCGGGTCTCTCCATGCAGCAGGCAATGAGCTTTACCAGGAGATCAAGCTGATGAACAAGAAGCTTGGAGACCTGCAACTCGAGAACAACTATCTCGAGAAGGAACTCAGTAAAACCATGAGCATCTGTGACAGCTCTGGTTCAGAAATCGGCGCTGGGAGAAGGCGTACTATGCGAAGAGACACAAAGCTATTGAAATCTGGCAGGAAGAGCCAGCAAGAGAGCACGGTGAACATCGAACAGCGCAAAGAGATCGACCACGCTGGCCTTGAGAAATCGAATGAGTTGTTGAGGGAGAAGCTCCACAAGCTGCAGAGCGAGGTGCAGGCACTCAGAAGCAAAGAACAGCCGGTGATCGATGTCAAGTCCTGCGATGCCGAGATCACAAAACTGCTTACCAACATGCAGATGGCCACTGCCAACGCGGCTCTCTTCAAGGAGAAGGTGCTTGAGCTCATCGCGTCGTGCGAGAGCTTCGAGATAAGCGAGATGGTGCAGAAGGAGGTCCTGAAGGAGGAGATCACCCGGAGGAACTCCTACGTGAATGCGCTCAAGGACAAGCTCAACGCCGTCGAGATCGAGAACAGTAGGCTGAAGGTTGATCTCAATGGTGACTTCACACTGTTGGGAGCGTTGCAAACTGAAGTCAGTGCCCTGGAGAAGCAAACCATGTCACTGGCCAAAGATTGCTTACCATCAAATAAGCTCAGGATGGAGGAATTCTCGGTGTCACCGCAGCTGTCCAAGATCGCGGTGAAGCCCATCCATGGTGAGCCGAACGCGACGAAGATGGTGAAGGACATGGAGCTGGAGAAGCTGCACGGGACGATCAAGGCGCTCCAGAAGGTGGTCACCGACACCGGCGTCGTCCTCGAGCAGGAGCGCCTCGACTTCAACGCCAACCTCCTCGACGCCCGCCGCCAGATCGACCTCCTCCGCCTCCGCGACGACATGGCCGCCGCCGTCGACGACAGCGACGCCGCCAGCGACCCAGCCGCCGCGGCCTACGACCGCCGCTTGCTCAAGGACATCCAGCTCGACCTCGTCCAGACCACAACTCCGACCAA]

[+] EMBL AY224547             [CGGATCGAGGGCATTTCTCATACAATGGAGAAGCTATCAGAGAAAAACGTATTCCTGGAAAATTTGTTATCTGAAAACAATACCGAGCTTGAGATCCTCAGAAGGAAGCTGAATGACTCGGAAGAGTCCACACATGCACTACTTAATCAGAATTCTGTACTTCGATCTGAAAAGAGAACCCTTGTGCGTGAGGTGGATAGCATGAATGGTGCCCTACTCAATCTGGAGGCCCAGTTCACGGAGTTAGAAGGACACCACCTGGATCTTCAGCAGGAGAAAAACAAGGCAAGCAGTGAAGTGATCATGCTACAGGAGATGTTAAGGCTTGAGAGAGAGGCGCACAAAGAACTGAACTACTCAGGCAAGACTCAGTTCAGTGCTGTACAGAAGCAGTTAAGCTTCCTGCTCGAAGAAGGCCGTCGTAGGGAGAACCAGCTTCAAGATGAGGAGCATAAGATTGTTGAAGCTCAGATGGAGATTTTCGTCTTGCAGAAGTGCTTAGGTGACATGGCAGAGGCAAATTCTGATGTCTCAGGGCAACTGCAGAAGCAGAAAGAGCTATGCGAAATCCAGGAGGAGAAATTAACCTTTTTGACAGAAAACAACCAGAGGTTAACGGAAGGAATTGGTTCTGTGATGGAAGAACTACATTTGGATGATAAATATGGATCATTGGATCTAATGAAGCTTGATGTAATCGTGCAGCTCATCTTGCATGAGATCAAGTGCTTGCTGAATACTATTTCTGATGCTCAGGACGTGAAGCAAAACCAGATCCTCGAGAAGTCTCTTGTCGTCACGCTTTTGGAGCACTTTGGACGCGAGGTGGCTGATCTAAGGTCAGAGAGGAGTGTTCTGAGGCAAGAGTGGCAGGCGAAGAGCGAAGAGCTTCTGCAGCTGCAAAATGAAAGGCACGACCTCATGAAGATCAGCTGCGAGTTACGGAAGGAGATGGAGGCTCGTAACCGTAGGGTTGAGGAGATGAAAGGTGAGGCAAAATTCTTGGTTCGACAACTCTCAGAGCTGCAAGAGTCGCGGCAGTCATTGCAAGCTGAAGTCATCAAGCTGATTGAAGAGAACTCCTCACTGTCAGGCAAACTTTATGACTCCAGGGAGAAAGAGAAGACGGCCAACGATGATTTCAATACTCTCCTTGGTGAAGCAATCAGTACAGACATCCTCGGTGTCGTTTTCAAAAGTCTTCATGATGAGAGGACATCTCAGCTGCAGTCTTTGCATGAAGATTTCGGGTCTCTCCATGCAGCAGGCAATGAGCTTTACCAGGAGATCAAGCTGATGAACAAGAAGCTTGGAGACCTGCAACTCGAGAACAACTATCTCGAGAAGGAACTCAGTAAAACCATGAGCATCTGTGACAGCTCTGGTTCAGAAATCGGCGCTGGGAGAAGGCGTACTATGCGAAGAGACACAAAGCTATTGAAATCTGGCAGGAAGAGCCAGCAAGAGAGCACGGTGAACATCGAACAGCGCAAAGAGATCGACCACGCTGGCCTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK106406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACACAAAGCTATTGAAATCTGGCAGGAAGAGCCAGCAAGAGAGCACGGTGAACATCGAACAGCGCAAAGAGATCGACCACGCTGGCCTTGAGAAATCGAATGAGTTGTTGAGGGAGAAGCTCCACAAGCTGCAGAGCGAGGTGCAGGCACTCAGAAGCAAAGAACAGCCGGTGATCGATGTCAAGTCCTGCGATGCCGAGATCACAAAACTGCTTACCAACATGCAGATGGCCACTGCCAACGCGGCTCTCTTCAAGGAGAAGGTGCTTGAGCTCATCGCGTCGTGCGAGAGCTTCGAGATAAGCGAGATGGTGCAGAAGGAGGTCCTGAAGGAGGAGATCACCCGGAGGAACTCCTACGTGAATGCGCTCAAGGACAAGCTCAACGCCGTCGAGATCGAGAACAGTAGGCTGAAGGTTGATCTCAATGGTGACTTCACACTGTTGGGAGCGTTGCAAACTGAAGTCAGTGCCCTGGAGAAGCAAACCATGTCACTGGCCAAAGATTGCTTACCATCAAATAAGCTCAGGATGGAGGAATTCTCGGTGTCACCGCAGCTGTCCAAGATCGCGGTGAAGCCCATCCATGGTGAGCCGAACGCGACGAAGATGGTGAAGGACATGGAGCTGGAGAAGCTGCACGGGACGATCAAGGCGCTCCAGAAGGTGGTCACCGACACCGGCGTCGTCCTCGAGCAGGAGCGCCTCGACTTCAACGCCAACCTCCTCGACGCCCGCCGCCAGATCGACCTCCTCCGCCTCCGCGACGACATGGCCGCCGCCGTCGACGACAGCGACGCCGCCAGCGACCCAGCCGCCGCGGCCTACGACCGCCGCTTGCTCAAGGACATCCAGCTCGACCTCGTCCAGACCACAACTCCGACCAA]


>consensus_2953#0 CGGATCGAGGGCATTTCTCATACAATGGAGAAGCTATCAGAGAAAAACGTATTCCTGGAA AATTTGTTATCTGAAAACAATACCGAGCTTGAGATCCTCAGAAGGAAGCTGAATGACTCG GAAGAGTCCACACATGCACTACTTAATCAGAATTCTGTACTTCGATCTGAAAAGAGAACC CTTGTGCGTGAGGTGGATAGCATGAATGGTGCCCTACTCAATCTGGAGGCCCAGTTCACG GAGTTAGAAGGACACCACCTGGATCTTCAGCAGGAGAAAAACAAGGCAAGCAGTGAAGTG ATCATGCTACAGGAGATGTTAAGGCTTGAGAGAGAGGCGCACAAAGAACTGAACTACTCA GGCAAGACTCAGTTCAGTGCTGTACAGAAGCAGTTAAGCTTCCTGCTCGAAGAAGGCCGT CGTAGGGAGAACCAGCTTCAAGATGAGGAGCATAAGATTGTTGAAGCTCAGATGGAGATT TTCGTCTTGCAGAAGTGCTTAGGTGACATGGCAGAGGCAAATTCTGATGTCTCAGGGCAA CTGCAGAAGCAGAAAGAGCTATGCGAAATCCAGGAGGAGAAATTAACCTTTTTGACAGAA AACAACCAGAGGTTAACGGAAGGAATTGGTTCTGTGATGGAAGAACTACATTTGGATGAT AAATATGGATCATTGGATCTAATGAAGCTTGATGTAATCGTGCAGCTCATCTTGCATGAG ATCAAGTGCTTGCTGAATACTATTTCTGATGCTCAGGACGTGAAGCAAAACCAGATCCTC GAGAAGTCTCTTGTCGTCACGCTTTTGGAGCACTTTGGACGCGAGGTGGCTGATCTAAGG TCAGAGAGGAGTGTTCTGAGGCAAGAGTGGCAGGCGAAGAGCGAAGAGCTTCTGCAGCTG CAAAATGAAAGGCACGACCTCATGAAGATCAGCTGCGAGTTACGGAAGGAGATGGAGGCT CGTAACCGTAGGGTTGAGGAGATGAAAGGTGAGGCAAAATTCTTGGTTCGACAACTCTCA GAGCTGCAAGAGTCGCGGCAGTCATTGCAAGCTGAAGTCATCAAGCTGATTGAAGAGAAC TCCTCACTGTCAGGCAAACTTTATGACTCCAGGGAGAAAGAGAAGACGGCCAACGATGAT TTCAATACTCTCCTTGGTGAAGCAATCAGTACAGACATCCTCGGTGTCGTTTTCAAAAGT CTTCATGATGAGAGGACATCTCAGCTGCAGTCTTTGCATGAAGATTTCGGGTCTCTCCAT GCAGCAGGCAATGAGCTTTACCAGGAGATCAAGCTGATGAACAAGAAGCTTGGAGACCTG CAACTCGAGAACAACTATCTCGAGAAGGAACTCAGTAAAACCATGAGCATCTGTGACAGC TCTGGTTCAGAAATCGGCGCTGGGAGAAGGCGTACTATGCGAAGAGACACAAAGCTATTG AAATCTGGCAGGAAGAGCCAGCAAGAGAGCACGGTGAACATCGAACAGCGCAAAGAGATC GACCACGCTGGCCTTGAGAAATCGAATGAGTTGTTGAGGGAGAAGCTCCACAAGCTGCAG AGCGAGGTGCAGGCACTCAGAAGCAAAGAACAGCCGGTGATCGATGTCAAGTCCTGCGAT GCCGAGATCACAAAACTGCTTACCAACATGCAGATGGCCACTGCCAACGCGGCTCTCTTC AAGGAGAAGGTGCTTGAGCTCATCGCGTCGTGCGAGAGCTTCGAGATAAGCGAGATGGTG CAGAAGGAGGTCCTGAAGGAGGAGATCACCCGGAGGAACTCCTACGTGAATGCGCTCAAG GACAAGCTCAACGCCGTCGAGATCGAGAACAGTAGGCTGAAGGTTGATCTCAATGGTGAC TTCACACTGTTGGGAGCGTTGCAAACTGAAGTCAGTGCCCTGGAGAAGCAAACCATGTCA CTGGCCAAAGATTGCTTACCATCAAATAAGCTCAGGATGGAGGAATTCTCGGTGTCACCG CAGCTGTCCAAGATCGCGGTGAAGCCCATCCATGGTGAGCCGAACGCGACGAAGATGGTG AAGGACATGGAGCTGGAGAAGCTGCACGGGACGATCAAGGCGCTCCAGAAGGTGGTCACC GACACCGGCGTCGTCCTCGAGCAGGAGCGCCTCGACTTCAACGCCAACCTCCTCGACGCC CGCCGCCAGATCGACCTCCTCCGCCTCCGCGACGACATGGCCGCCGCCGTCGACGACAGC GACGCCGCCAGCGACCCAGCCGCCGCGGCCTACGACCGCCGCTTGCTCAAGGACATCCAG CTCGACCTCGTCCAGACCACAACTCCGACCAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)