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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2967 cluster # 2967       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2967#0 length = 1273 sequences # 2  

consensusID : consensus_2967#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1273
fasta sequence
                              [CTAGTTACACCAGCATCCTGCAAGAGACCCACCACAAATGCTGAACTCCTGTTTTTCCCTCCCTTTCTTCCAACACAATGATCTAATCCACAGAAGTGCTTCGGAAGCTTCCATCGATCGGGGCGCGTGCTACCTACGCTCGGCCTGGTGATCTTCCTGATTCTCCAGTTCCTCTGAAGAATTCAAGGTGAAGACCATTAGAAAACCAGAGTAAATAAAGGAAGGAATTGAAAGCCTGCAAGTATAATGTTCAAGGTGACACACATATATTGCTCTGATTGATGAGTAGTAGTTCGTTAAGGGTGCTAGATGCATGTTGGCTAATCATTTCAGATATGATAAGGTTCATGCAGGGTGTTCATTGGGTGGAGTAATTGTTTTCCTTTATTAAAAGGTTAGCATACATCATCATGAGCACTGTTTGTGTAGTGAATACAAATAGTGTGACCATCTTATACATTGTTTTCATTGTGCAATCAAATTTAAGTCATGCCTTTCAAACTTGTACAGTATTAAATTTCGATATGGCAAGCAAGCTTAATTCCATAAAGAAGTCATATTATGGAATGACATAGATATAGTTCATTTTATATTGAACAAATAGAGATTTCAAAAGCCAATCCAGCTTATACTCAGCAAGATGAAACAAAAAGCATGAACATAATTTGAAACATATATGCTCTTTAAATTAGACTGAAGTGGGATAGAAAGATTTCAGTATAAAACTTAAGGTGTTCTTGAACAAGACCGCACCTCAGATAACACGATTAGGCATCGACAATACTTTTCTGCTATATTAATCTTTTATTATCAATAAGAATTTCCAGAGATCCATGGAAGGTTAGTTAAAAGGCCATTAAAAAACTTGTAGTTGACACATCTCAAGCTAACATTCTGACTAAATTTGGTGAAACAGAAAAAAGGAGAAGAGGAACAAGAAAAAGAGCAGTACATCTCATGTTTGCACGCTATAAAAGTTACCTGTTGTGGATTGGATCTGGTCCATTTGGCACCCTCCTCTTCATGCTGCTGAAAGCATCACCAGCATTGAAATCTTCCAAGCTCCTGTGACTGTGAACTAGTCCTCCATTGATCATCATCCTTCTACCCCCAACACCAAGAACACTACTCCCCGGAGACGGCGGTTTCGCGCTTGTCTCCACCAACAATGACACCAAAATGAGGCCTCCAAATAGGATGGCCAATGTTGTCGCTGATACCCGCCTCGCTGACCTGGCAAACCTGCTCATAATACCCTAATTTCTATATCTTG]

[+] EMBL AK067485             [CTAGTTACACCAGCATCCTGCAAGAGACCCACCACAAATGCTGAACTCCTGTTTTTCCCTCCCTTTCTTCCAACACAATGATCTAATCCACAGAAGTGCTTCGGAAGCTTCCATCGATCGGGGCGCGTGCTACCTACGCTCGGCCTGGTGATCTTCCTGATTCTCCAGTTCCTCTGAAGAATTCAAGGTGAAGACCATTAGAAAACCAGAGTAAATAAAGGAAGGAATTGAAAGCCTGCAAGTATAATGTTCAAGGTGACACACATATATTGCTCTGATTGATGAGTAGTAGTTCGTTAAGGGTGCTAGATGCATGTTGGCTAATCATTTCAGATATGATAAGGTTCATGCAGGGTGTTCATTGGGTGGAGTAATTGTTTTCCTTTATTAAAAGGTTAGCATACATCATCATGAGCACTGTTTGTGTAGTGAATACAAATAGTGTGACCATCTTATACATTGTTTTCATTGTGCAATCAAATTTAAGTCATGCCTTTCAAACTTGTACAGTATTAAATTTCGATATGGCAAGCAAGCTTAATTCCATAAAGAAGTCATATTATGGAATGACATAGATATAGTTCATTTTATATTGAACAAATAGAGATTTCAAAAGCCAATCCAGCTTATACTCAGCAAGATGAAACAAAAAGCATGAACATAATTTGAAACATATATGCTCTTTAAATTAGACTGAAGTGGGATAGAAAGATTTCAGTATAAAACTTAAGGTGTTCTTGAACAAGACCGCACCTCAGATAACACGATTAGGCATCGACAATACTTTTCTGCTATATTAATCTTTTATTATCAATAAGAATTTCCAGAGATCCATGGAAGGTTAGTTAAAAGGCCATTAAAAAACTTGTAGTTGACACATCTCAAGCTAACATTCTGACTAAATTTGGTGAAACAGAAAAAAGGAGAAGAGGAACAAGAAAAAGAGCAGTACATCTCATGTTTGCACGCTATAAAAGTTACCTGTTGTGGATTGGATCTGGTCCATTTGGCACCCTCCTCTTCATGCTGCTGAAAGCATCACCAGCATTGAAATCTTCCAAGCTCCTGTGACTGTGAACTAGTCCTCCATTGATCATCATCCTTCTACCCCCAACACCAAGAACACTACTCCCCGGAGACGGCGGTTTCGCGCTTGTCTCCACCAACAATGACACCAAAATGAGGCCTCCAAATAGGATGGCCAATGTTGTCGCTGATACCCGCCTCGCTGACCTGGCAAACCTGCTCATAATACCCTAATTTCTATATCTTG]
[+] EMBL CA764700             [                          ACCCACCACAAATGCTGAACTCCTGTTTTTCCCTCCCTTTCTTCCAACACAATGATCTAATCCACAGAAGTGCTTCGGAAGCTTCCATCGATCGGGGCGCGTGCTACCTACGCTCGGCCTGGTGATCTTCCTGATTCTCCAGTTCCTCTGAAGAATTCAAGGTGAAGACCATTAGAAAACCAGAGTAAATAAAGGAAGGAATTGAAAGCCTGCAAGTATAATGTTCAAGGTGACACACATATATTGCTCTGATTGATGAGTAGTAGTTCGTTAAGGGTGCTAGATGCATGTTGGCTAATCATTTCAGATATGATAAGGTTCATGCAGGGTGTTCATTGGGTGGAGTAATTGTTTTCCTTTATTAAAAGGTTAGCATACATCATCATGAGCACTGTTTGTGTAGTGAATACAAATAGTGTGACCATCTTATACATTGTTTTCATTGTGCAATCAAATTTAAGTCATGCCTTTCAAACTTGTACAGTATTAAATTTCGATATGGCAGGCAAGCTTAATTCCATAAAGAAGTCATATTATGGAATGACATAGATATAGTTCATTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_2967#0 CTAGTTACACCAGCATCCTGCAAGAGACCCACCACAAATGCTGAACTCCTGTTTTTCCCT CCCTTTCTTCCAACACAATGATCTAATCCACAGAAGTGCTTCGGAAGCTTCCATCGATCG GGGCGCGTGCTACCTACGCTCGGCCTGGTGATCTTCCTGATTCTCCAGTTCCTCTGAAGA ATTCAAGGTGAAGACCATTAGAAAACCAGAGTAAATAAAGGAAGGAATTGAAAGCCTGCA AGTATAATGTTCAAGGTGACACACATATATTGCTCTGATTGATGAGTAGTAGTTCGTTAA GGGTGCTAGATGCATGTTGGCTAATCATTTCAGATATGATAAGGTTCATGCAGGGTGTTC ATTGGGTGGAGTAATTGTTTTCCTTTATTAAAAGGTTAGCATACATCATCATGAGCACTG TTTGTGTAGTGAATACAAATAGTGTGACCATCTTATACATTGTTTTCATTGTGCAATCAA ATTTAAGTCATGCCTTTCAAACTTGTACAGTATTAAATTTCGATATGGCAAGCAAGCTTA ATTCCATAAAGAAGTCATATTATGGAATGACATAGATATAGTTCATTTTATATTGAACAA ATAGAGATTTCAAAAGCCAATCCAGCTTATACTCAGCAAGATGAAACAAAAAGCATGAAC ATAATTTGAAACATATATGCTCTTTAAATTAGACTGAAGTGGGATAGAAAGATTTCAGTA TAAAACTTAAGGTGTTCTTGAACAAGACCGCACCTCAGATAACACGATTAGGCATCGACA ATACTTTTCTGCTATATTAATCTTTTATTATCAATAAGAATTTCCAGAGATCCATGGAAG GTTAGTTAAAAGGCCATTAAAAAACTTGTAGTTGACACATCTCAAGCTAACATTCTGACT AAATTTGGTGAAACAGAAAAAAGGAGAAGAGGAACAAGAAAAAGAGCAGTACATCTCATG TTTGCACGCTATAAAAGTTACCTGTTGTGGATTGGATCTGGTCCATTTGGCACCCTCCTC TTCATGCTGCTGAAAGCATCACCAGCATTGAAATCTTCCAAGCTCCTGTGACTGTGAACT AGTCCTCCATTGATCATCATCCTTCTACCCCCAACACCAAGAACACTACTCCCCGGAGAC GGCGGTTTCGCGCTTGTCTCCACCAACAATGACACCAAAATGAGGCCTCCAAATAGGATG GCCAATGTTGTCGCTGATACCCGCCTCGCTGACCTGGCAAACCTGCTCATAATACCCTAA TTTCTATATCTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)