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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2980 cluster # 2980       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2980#0 length = 1282 sequences # 2  

consensusID : consensus_2980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1282
fasta sequence
                              [CTCCTCCTCCTCCTCAGCCCTTACCAACCAAAGCAAACCTTCCCCCTCCTCCTCCTCCGGCCACCGCGGCGAGAGGCCCCGATGGCGCCAACGGTGGAGATCAGCCACCTCTCCTTCACCTACCCGGGCATCGACGGCCGCCCGCCGCCCGGCGCGCCGCCGCTCATCGAGGACGTCTGCTTCTCCCTCGACGCCGGCCACCGCTGCCTCCTCCTCGGCTCCAACGGCGCCGGCAAGACGACGATACTGAAGATACTGGGCGGGAAGCACATGGTGGATCCGAGCATGGTGCGGGTCCTGGGCAGGTCGGCCTTCCACGACACGGCGCTCACATCATCTGGCGACCTCTGCTACCTAGGCGGTGAGTGGAGGCGCGATGTTGCCTTTGCGGGCTACCAGGTAAATATACAGATGGACATTTCAGCAGAGAAGATGATATTTGGTGTTGTGGGCGTTGATCCTCAAAGGAGAGATGAGCTTATCAAGATTTTGGATATTGACCTTGCCTGGCGCATGCACAAGGCATCCGATGGTCAAAGGAGACGGGTCCAAATTTGCATGGGGCTTCTCAAGCCATTCAAAGTTCTTCTTCTTGATGAGATCACAGTAGATCTGGATGTGTTGGCAAGAGCAAATCTATTGACATATTTAAAGAAGGAATGCGAGGAACGGGGTGCTACAATCATCTACGCAACACATATTTTTGACGGACTTGATGATTGGCCAACACACATTGTGTACATTGCCCGTGGGAAGTTGCAACTAGCACTGCCTTTAGAGAAGGTGAAAGAAATGAGCCAGTTATCTCTCATGAGAACAGTGGAGAGCTGGCTGAGGAAAGAGAGAGATGAGGATAGGCGGAGAAGAAAGGAACGGAAGGAGAAGGGCCTCCCAGAGTTTGACAAGGTTACTGAGGGGAGTCGGGTTATAGGTGATCCCGCTGCCAGAGCGGTGAACAATGGGTGGGCAGCAGGGAGGCTCGCCTCAACGGTTGCTGGTGAAGAGAATTTCATTTTCAGCTCTAACAGCGTTCTTAGGCAATAATCCTACCCTGCAATTTGGCTTTGTAATGATGAATAACGATCCTATAGATCCAATAGATCACACCATCCCACAGGAGTTTTTGCAGTAACAGCCTAACAGGCTAACAGCAAAGTTCTTGTATACAACTGCTCAAAGATTATTTTCAAAAATTTCGCCTTCTTTTATGTATACAACTGTAATTTGGGTTTCATGATCTGATACTAGTTGCTGAATAAGTCAATATTGTTGTATATCTAAA]

[+] EMBL AK069044             [CTCCTCCTCCTCCTCAGCCCTTACCAACCAAAGCAAACCTTCCCCCTCCTCCTCCTCCGGCCACCGCGGCGAGAGGCCCCGATGGCGCCAACGGTGGAGATCAGCCACCTCTCCTTCACCTACCCGGGCATCGACGGCCGCCCGCCGCCCGGCGCGCCGCCGCTCATCGAGGACGTCTGCTTCTCCCTCGACGCCGGCCACCGCTGCCTCCTCCTCGGCTCCAACGGCGCCGGCAAGACGACGATACTGAAGATACTGGGCGGGAAGCACATGGTGGATCCGAGCATGGTGCGGGTCCTGGGCAGGTCGGCCTTCCACGACACGGCGCTCACATCATCTGGCGACCTCTGCTACCTAGGCGGTGAGTGGAGGCGCGATGTTGCCTTTGCGGGCTACCAGGTAAATATACAGATGGACATTTCAGCAGAGAAGATGATATTTGGTGTTGTGGGCGTTGATCCTCAAAGGAGAGATGAGCTTATCAAGATTTTGGATATTGACCTTGCCTGGCGCATGCACAAGGCATCCGATGGTCAAAGGAGACGGGTCCAAATTTGCATGGGGCTTCTCAAGCCATTCAAAGTTCTTCTTCTTGATGAGATCACAGTAGATCTGGATGTGTTGGCAAGAGCAAATCTATTGACATATTTAAAGAAGGAATGCGAGGAACGGGGTGCTACAATCATCTACGCAACACATATTTTTGACGGACTTGATGATTGGCCAACACACATTGTGTACATTGCCCGTGGGAAGTTGCAACTAGCACTGCCTTTAGAGAAGGTGAAAGAAATGAGCCAGTTATCTCTCATGAGAACAGTGGAGAGCTGGCTGAGGAAAGAGAGAGATGAGGATAGGCGGAGAAGAAAGGAACGGAAGGAGAAGGGCCTCCCAGAGTTTGACAAGGTTACTGAGGGGAGTCGGGTTATAGGTGATCCCGCTGCCAGAGCGGTGAACAATGGGTGGGCAGCAGGGAGGCTCGCCTCAACGGTTGCTGGTGAAGAGAATTTCATTTTCAGCTCTAACAGCGTTCTTAGGCAATAATCCTACCCTGCAATTTGGCTTTGTAATGATGAATAACGATCCTATAGATCCAATAGATCACACCATCCCACAGGAGTTTTTGCAGTAACAGCCTAACAGGCTAACAGCAAAGTTCTTGTATACAACTGCTCAAAGATTATTTTCAAAAATTTCGCC                                                                                  ]
[-] EMBL CF196280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCTGCCAGAGCNGTGNACAATNNNNNGGCAGCAGGGAGGCNNNNCTCAACGGTTGCTGGTGAAGAGAATTTCATTTTCAGCTCTAACAGCGTTCTTAGGCAATAATCCTACCCTGCAATTTGGCTTTGTAATGATGAATAACGATCCTATAGATCCAATAGATCACACCATCCCACAGGAGTTTTTGCAGTAACAGCCTAACAGGCTAACAGCAAAGTTCTTGTATACAACTGCTCAAAGATTATTTTCAAAAATTCCGCCTTCTTTTATGTATACAACTGTAATTTGGGTTTCATGATCTGATACTAGTTGCTGAATAAGTCAATATTGTTGTATATCTAAA]


>consensus_2980#0 CTCCTCCTCCTCCTCAGCCCTTACCAACCAAAGCAAACCTTCCCCCTCCTCCTCCTCCGG CCACCGCGGCGAGAGGCCCCGATGGCGCCAACGGTGGAGATCAGCCACCTCTCCTTCACC TACCCGGGCATCGACGGCCGCCCGCCGCCCGGCGCGCCGCCGCTCATCGAGGACGTCTGC TTCTCCCTCGACGCCGGCCACCGCTGCCTCCTCCTCGGCTCCAACGGCGCCGGCAAGACG ACGATACTGAAGATACTGGGCGGGAAGCACATGGTGGATCCGAGCATGGTGCGGGTCCTG GGCAGGTCGGCCTTCCACGACACGGCGCTCACATCATCTGGCGACCTCTGCTACCTAGGC GGTGAGTGGAGGCGCGATGTTGCCTTTGCGGGCTACCAGGTAAATATACAGATGGACATT TCAGCAGAGAAGATGATATTTGGTGTTGTGGGCGTTGATCCTCAAAGGAGAGATGAGCTT ATCAAGATTTTGGATATTGACCTTGCCTGGCGCATGCACAAGGCATCCGATGGTCAAAGG AGACGGGTCCAAATTTGCATGGGGCTTCTCAAGCCATTCAAAGTTCTTCTTCTTGATGAG ATCACAGTAGATCTGGATGTGTTGGCAAGAGCAAATCTATTGACATATTTAAAGAAGGAA TGCGAGGAACGGGGTGCTACAATCATCTACGCAACACATATTTTTGACGGACTTGATGAT TGGCCAACACACATTGTGTACATTGCCCGTGGGAAGTTGCAACTAGCACTGCCTTTAGAG AAGGTGAAAGAAATGAGCCAGTTATCTCTCATGAGAACAGTGGAGAGCTGGCTGAGGAAA GAGAGAGATGAGGATAGGCGGAGAAGAAAGGAACGGAAGGAGAAGGGCCTCCCAGAGTTT GACAAGGTTACTGAGGGGAGTCGGGTTATAGGTGATCCCGCTGCCAGAGCGGTGAACAAT GGGTGGGCAGCAGGGAGGCTCGCCTCAACGGTTGCTGGTGAAGAGAATTTCATTTTCAGC TCTAACAGCGTTCTTAGGCAATAATCCTACCCTGCAATTTGGCTTTGTAATGATGAATAA CGATCCTATAGATCCAATAGATCACACCATCCCACAGGAGTTTTTGCAGTAACAGCCTAA CAGGCTAACAGCAAAGTTCTTGTATACAACTGCTCAAAGATTATTTTCAAAAATTTCGCC TTCTTTTATGTATACAACTGTAATTTGGGTTTCATGATCTGATACTAGTTGCTGAATAAG TCAATATTGTTGTATATCTAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)