cluster # 3

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3 cluster # 3 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3#0 length = 876 sequences # 2

consensusID : consensus_3#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 876
fasta sequence

                              [GNAAGGCACAGCATCGTNTCCAGCGGAGTCAAACACAAAGACAAGTCGAGATCCGGCGGCCGGTGGCGTCCTCCTCCCTCTCCCTCCTCCCCAACCAACGGCGCTGATCCCCTCCGCCATCTCCGTCCATCTCCGCCTAAAAAAACTAAGCGATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGTCCCGGTTCCTGCCGATCGTCAACATCGG-CGCATCATGCGCCGGGCCGTTGCCGTAGAATCGGTAAGATCGTCAAAGGACTNCCAAGNAGTNCCGTTCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACCATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAGGCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATGGAGATCCTGGATCATCGTTTGAAGGCATGTAGGACGAGGAGTGTGATAGCATCTAGGAAGGAGAACCATCGTTTTTAGGGAAAGAACGCTCCAGCATCCTGTTATGTTGTAAGCAGGATGCTTCTAAAGTTCCAATACCTTGTTACCACGAATGTTAGTCGTCGTTCTTTTTGAAATGTTCTTGTGTTAGCCAGGATGTCCAAATTTGTTGTAGGTTCTAGTTCAGTCGTGTGTTGTGTGGTTGTGTCTAACCATATTTGGCCGTTTCCGGCTGTCCTGCATATGCTAAATTCAGAGGGGTAAAGAGATCTAAGAAAAA]

[+] EMBL D43203               [GNAAGGCACAGCATCGTNTCCAGCGGAGTCAAACACAAAGACAAGTCGAGATCCGGCGGCCGGTGGCGTCCTCCTCCCTCTCCCTCCTCCCCAACCAACGGCGCTGATCCCCTCCGCCATCTCCGTCCATCTCCGCCTAAAAAAACTAAGCGATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGTCCCGGTTCCTGCCGATCGTCAACATCGG CGCATCATGCGCCGGGCCGTTGCCGTAGAATCGGTAAGATCGTCAAAGGACTNCCAAGNAGTNCCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AB095440             [                                                     CGGCGGCCGGTGGCGTCCTCCTCCCTCTCCCTCCTCCCCAACCAACGGCGCTGATCCCCTCCGCCATCTCCGTCCATCTCCGCCTAAAAAAACTAAGCGATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGG ACCGGTTCCTGCCGATCGCCAACATCGGCCGCATCATGCGCCGGGCCG TGCCGGAGAA CGGCAAGATCG CCAAGGACT CCAAGGAGT CCGTCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACCATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAGGCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATGGAGATCCTGGATCATCGTTTGAAGGCATGTAGGACGAGGAGTGTGATAGCATCTAGGAAGGAGAACCATCGTTTTTAGGGAAAGAACGCTCCAGCATCCTGTTATGTTGTAAGCAGGATGCTTCTAAAGTTCCAATACCTTGTTACCACGAATGTTAGTCGTCGTTCTTTTTGAAATGTTCTTGTGTTAGCCAGGATGTCCAAATTTGTTGTAGGTTCTAGTTCAGTCGTGTGTTGTGTGGTTGTGTCTAACCATATTTGGCCGTTTCCGGCTGTCCTGCATATGCTAAATTCAGAGGGGTAAAGAGATCTAAGAAAAA]




>consensus_3#0
GNAAGGCACAGCATCGTNTCCAGCGGAGTCAAACACAAAGACAAGTCGAGATCCGGCGGC
CGGTGGCGTCCTCCTCCCTCTCCCTCCTCCCCAACCAACGGCGCTGATCCCCTCCGCCAT
CTCCGTCCATCTCCGCCTAAAAAAACTAAGCGATGTCGGAGGGGTTCGACGGGACGGAGA
ACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGTCCCGGTTCCTGCCGATC
GTCAACATCGGCGCATCATGCGCCGGGCCGTTGCCGTAGAATCGGTAAGATCGTCAAAGG
ACTNCCAAGNAGTNCCGTTCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGA
AGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACCATCAATGGGGACGACCTGATCTG
GTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAGGCT
CTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAA
AGATGTTGTACTTAATGGAGATCCTGGATCATCGTTTGAAGGCATGTAGGACGAGGAGTG
TGATAGCATCTAGGAAGGAGAACCATCGTTTTTAGGGAAAGAACGCTCCAGCATCCTGTT
ATGTTGTAAGCAGGATGCTTCTAAAGTTCCAATACCTTGTTACCACGAATGTTAGTCGTC
GTTCTTTTTGAAATGTTCTTGTGTTAGCCAGGATGTCCAAATTTGTTGTAGGTTCTAGTT
CAGTCGTGTGTTGTGTGGTTGTGTCTAACCATATTTGGCCGTTTCCGGCTGTCCTGCATA
TGCTAAATTCAGAGGGGTAAAGAGATCTAAGAAAAA

clustalw multiple alignements is not computed in this case