cluster # 3010

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Oryza sativa
cluster # 3010 cluster # 3010 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3010#0 length = 1812 sequences # 2
consensusID : consensus_3010#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1812
fasta sequence
                              [GGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCAAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGTAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCGAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGATAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCTGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGATGGCAAGTGCTCTAGCTGGGTGCACCATCTTCAGTAGAACATGGCTGCTCTGCTCCCTCTGTAAATATAATCTTAGGCATCAGGAACTATGGCTTTTCTTTTGGTTGCAACGACAACAATGTGCTGGCTGGCCACCAGGTTGTGTGAAAGCCGCGGTTCTAGGCGCCCTCCACTACTGACGAGATGATGGTTCTTTTTGGGTTGGCTGTTGTGCTGCATACTTGTCCTGACCAATTGGTGTAATGTATATATATAGCCTTGCCGTCCAAGACGACAAGCTGACAATATTGTGGACTTCAACAATGCAAAGGTCAAGGCATTGAACTTGTGTTGAATACTTGAATAAGATGTTGGCACTTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK064402             [GGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCAAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGTAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCGAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGATAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCTGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGATGGCAAGTGCTCTAGCTGGGTGCACCATCTTCAGTAGAACATGGCTGCTCTGCTCCCTCTGTAAATATAATCTTAGGCATCAGGAACTATGGCTTTTCTTTTGGTTGCAACGACAACAATGTGCTGGCTGGCCACCAGGTTGTGTGAAAGCCGCGGTTCTAGGCGCCCTCCACTACTGACGAGATGATGGTTCTTTTTGGGTTGGCTGTTGTGCTGCATACTTGTCCTGACCAATTGGTGTAATGTATATATATAGCCTTGCCGTCCAAGACGACAAGCTGACAATATTGTGGACTTCAACAATGCAAAGGTCAAGGCATTGAACTTGTGTTGAATACTTGAATAAGATGTTGGCACT                                                                                                          ]
[+] EMBL CF315653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gagtagaaaTGTGTGAAAGCCGCGGTTCTAGGCGCCCTCCACTACTGACGAGATGATGGTTCTTTTTGGGTTGGCTGTTGTGCTGCATACTTGTCCTGACCAATTGGTGTAATGTATATATATAGCCTTGCCGTCCAAGACGACAAGCTGACAATATTGTGGACTTCAACAATGCAAAGGTCAAGGCATTGAACTTGTGTTGAATACTTGAATAAGATGTTGGCACTTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_3010#0
GGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCA
AACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCT
TGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGG
AAATTTGATCCTTGGAGAGCCCAAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAA
AACAAATGGATCTGAAATAACTCCAACCACCGGTGTAATTCCTTTAACACAAGAAAATAT
TGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGA
ATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTT
AGGACAGAAACATCGAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGATAAATA
TCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGC
GGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGA
TGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAA
TTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATAC
CTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATC
AATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGC
TACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAG
AAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCA
GATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCC
TGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTAC
CATTCAGAAATGGCTTGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAG
GTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTA
CCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCTGCAGCAAA
CAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGC
GTTCCAGGTTTATATCACAAGAAAGTGATGGCAAGTGCTCTAGCTGGGTGCACCATCTTC
AGTAGAACATGGCTGCTCTGCTCCCTCTGTAAATATAATCTTAGGCATCAGGAACTATGG
CTTTTCTTTTGGTTGCAACGACAACAATGTGCTGGCTGGCCACCAGGTTGTGTGAAAGCC
GCGGTTCTAGGCGCCCTCCACTACTGACGAGATGATGGTTCTTTTTGGGTTGGCTGTTGT
GCTGCATACTTGTCCTGACCAATTGGTGTAATGTATATATATAGCCTTGCCGTCCAAGAC
GACAAGCTGACAATATTGTGGACTTCAACAATGCAAAGGTCAAGGCATTGAACTTGTGTT
GAATACTTGAATAAGATGTTGGCACTTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
clustalw multiple alignements is not computed in this case