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Oryza sativa
cluster # 3012 cluster # 3012       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3012#0 length = 2417 sequences # 2  

consensusID : consensus_3012#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2417
fasta sequence
                              [CCAGCAAAAAAGGAGATCCCTTCCAGTGTAAAGCATGGCACATTTCCAGGTTCTGAGGAACAGCAGTTGCATATGCCGTCAAATGGCGGGATTATACCTGGACCTGCAAATGCAGCTTCTCTTCCTGCACCTGTTTTGATAGAGGATAATTGGGTATGCTGTGACATGTGTCATAAATGGCGTCTCCTCCCCTACGGGACAAACACTTCCATGCTTCCAAAAAAGTGGATATGCAGCATGCTTGACTGGCTACCTGGGATGAACAAATGCGACATTAGTGAGGATGAAACAACAAATGCTCTAAATGCACTTTATGTCGCTCAAATCCCTGCCGCTGGTGTTTCTTCAGGTGGCCCTCACACTGCGCATGCAAGTGTAGCAGCATCTAGCACCTACAATATAAGTGGACAACTGGGACAGAGTAGGAAAAGGAAAAATGCTCTGAAAGACGAAAACTGTTACGAGCATGATCAATAAGCCCCTGCAAAAATGACTCTCACGAGCAATCAACAAGCCCCTGCAAAAAATAGAGAAGTTGTTGATAGTGAACATTATACTAATGACAGAGATCCTGTAAGCACACATGATCTGGTGCCACAGAGCAAATCAGCTTCTGAAAGGCATAAGTCTAAGCACAAGAGTCGCAGTAGCCACTCAGATGGAGGAGATCTTACAGAAAAATCGAAGAAGCATTCAAAATCAAAAAACAGGAGAGGAATTGATCGAGATGAGCACAAAACATCTAAGAAGACAAAAAAAGAGGATCGACATTACTTTAACAAAGATTGGAAAAATGAATACGATTTAGCTGGCAACAAAGTTCGTGATGAAACCAAAGCTTTATCTGCAAAAGCAAAAATGTCAAAGGACTCATGTGAACAAGATGAGTTTTCTTTACGCAAGGAAAAAGCTTCAAGGTTTGATATTTTGGAAAAAACAAAGAGAATTAATGATGATGATGTGGCCTTTCATGAGAAGATGAAAGAACATCGTGCAGGCATAGAAACATTAGATTTGTCTGGCAAAAAGAAGACAGTGAAGGAATGGGAGGATAACCGGCTCAGTTCAATGGACCACACAAGCAAAGGGGGCGATAATGAGAATTTGAACGAGAGATTATCAAAGATAAAGAAGTCCGAAGCTAGGCCTGAAGAAGTTCAGGATGCAAATGCATTATTTTCTTCTGCTGGAAGGCGTCAAGATAATGAGCTAGTTGCTGACAACAAATTTGTTACTTGTAAAGAAGGTCCATCAGAACTATGGGATAATCAACCTCCCAGACAGGTCTTGAACTTGGCGGAACCCACTAGGAGGGATGTTGCCTGTCTTCAGTCTTCTACGGTTGCAACTTCAAGCTCTTCAAAGGTCTCAAGCTCTCGGAGAAACAAAAATTCTCGAGAAGCAAAGGGCTCTCCCGTTGAATCAGTATCTTCATCACCACTGAAAAATTCAAACACTGATAAGATTTCTAAGGCCAGGAAAACTGGAAAAGATGGAGAATTGAATGCTGATTCAAGCATCTTGCATACCCCAATGAAATATCCAACCCACGAAGTTGGTTTACTACATACTGGGCAGCAAGCTGTGGGTGAAGCCATTCTGCGTGGTTCTACAAATAACTCCGGTATGGGGAGAGTAGATAATCAATTGTACCCTGGTGATAAAAAGATCTTGGATATGCATGGCCCTACACTACAACCTGATCAGCAGGATTGTTTTAACCCGAGGGCTACAGCTGATTCCACTGGACATAAAAGTAAAAATAGTGCTCCTTCACGCCAAGGTAGAAATGGATCCAGTAACTTGATTTCAGAGGGAAATAAGCAGATAGAGATGTCATCCAGAAAAGAGAAATTACGTCCTAGTATTGATAATCAAGATATGCAAAAGTCTATTGGTCAAGATAATCATTCTCATATGAAAGAAGGCAAATCAGAGGTTCACACCACTAGAGTAAAACCAGGTGCTTCAAAAAACCACACACAATTAAGGTCCAATGTTGAAAATGGAGATTCTGCGAGTCCAATTAGGAGGGATGGTAATATGATTGCATTTGCACTCAAGGAAGCTCGGGATCTAAAACACAAGGCTAATCATTTGAAGGAAAAAGGACTTGAACTTGAAAGTATGGGCCTGTACTTTGAAGCGGCTTTGAAGTTTCTGCATGTTGCATCTCTTTGGGAAACTCCTAATCTGGACAATTCGAGATCAGGCGATGTTGCTCAGTCAATGAAGATGTATCCTGAAACTGCAAAACTCTGCAGCTTTTGTGCTCATGCCTATGAACGATGCAATAAAATGGCTTCTGCCGCTTTAGCATATAAATGTGTAGAAGTGGCTTACCTCAAAGCAGCGTATTACAAACACCCTAGTGCAAGCAAGGATCGACAAGAACTACAGTCGGTTGTACAGATAGC]

[+] EMBL AK062583             [CCAGCAAAAAAGGAGATCCCTTCCAGTGTAAAGCATGGCACATTTCCAGGTTCTGAGGAACAGCAGTTGCATATGCCGTCAAATGGCGGGATTATACCTGGACCTGCAAATGCAGCTTCTCTTCCTGCACCTGTTTTGATAGAGGATAATTGGGTATGCTGTGACATGTGTCATAAATGGCGTCTCCTCCCCTACGGGACAAACACTTCCATGCTTCCAAAAAAGTGGATATGCAGCATGCTTGACTGGCTACCTGGGATGAACAAATGCGACATTAGTGAGGATGAAACAACAAATGCTCTAAATGCACTTTATGTCGCTCAAATCCCTGCCGCTGGTGTTTCTTCAGGTGGCCCTCACACTGCGCATGCAAGTGTAGCAGCATCTAGCACCTACAATATAAGTGGACAACTGGGACAGAGTAGGAAAAGGAAAAATGCTCTGAAAGACGAAAACTGTTACGAGCATGATCAATAAGCCCCTGCAAAAATGACTCTCACGAGCAATCAACAAGCCCCTGCAAAAAATAGAGAAGTTGTTGATAGTGAACATTATACTAATGACAGAGATCCTGTAAGCACACATGATCTGGTGCCACAGAGCAAATCAGCTTCTGAAAGGCATAAGTCTAAGCACAAGAGTCGCAGTAGCCACTCAGATGGAGGAGATCTTACAGAAAAATCGAAGAAGCATTCAAAATCAAAAAACAGGAGAGGAATTGATCGAGATGAGCACAAAACATCTAAGAAGACAAAAAAAGAGGATCGACATTACTTTAACAAAGATTGGAAAAATGAATACGATTTAGCTGGCAACAAAGTTCGTGATGAAACCAAAGCTTTATCTGCAAAAGCAAAAATGTCAAAGGACTCATGTGAACAAGATGAGTTTTCTTTACGCAAGGAAAAAGCTTCAAGGTTTGATATTTTGGAAAAAACAAAGAGAATTAATGATGATGATGTGGCCTTTCATGAGAAGATGAAAGAACATCGTGCAGGCATAGAAACATTAGATTTGTCTGGCAAAAAGAAGACAGTGAAGGAATGGGAGGATAACCGGCTCAGTTCAATGGACCACACAAGCAAAGGGGGCGATAATGAGAATTTGAACGAGAGATTATCAAAGATAAAGAAGTCCGAAGCTAGGCCTGAAGAAGTTCAGGATGCAAATGCATTATTTTCTTCTGCTGGAAGGCGTCAAGATAATGAGCTAGTTGCTGACAACAAATTTGTTACTTGTAAAGAAGGTCCATCAGAACTATGGGATAATCAACCTCCCAGACAGGTCTTGAACTTGGCGGAACCCACTAGGAGGGATGTTGCCTGTCTTCAGTCTTCTACGGTTGCAACTTCAAGCTCTTCAAAGGTCTCAAGCTCTCGGAGAAACAAAAATTCTCGAGAAGCAAAGGGCTCTCCCGTTGAATCAGTATCTTCATCACCACTGAAAAATTCAAACACTGATAAGATTTCTAAGGCCAGGAAAACTGGAAAAGATGGAGAATTGAATGCTGATTCAAGCATCTTGCATACCCCAATGAAATATCCAACCCACGAAGTTGGTTTACTACATACTGGGCAGCAAGCTGTGGGTGAAGCCATTCTGCGTGGTTCTACAAATAACTCCGGTATGGGGAGAGTAGATAATCAATTGTACCCTGGTGATAAAAAGATCTTGGATATGCATGGCCCTACACTACAACCTGATCAGCAGGATTGTTTTAACCCGAGGGCTACAGCTGATTCCACTGGACATAAAAGTAAAAATAGTGCTCCTTCACGCCAAGGTAGAAATGGATCCAGTAACTTGATTTCAGAGGGAAATAAGCAGATAGAGATGTCATCCAGAAAAGAGAAATTACGTCCTAGTATTGATAATCAAGATATGCAAAAGTCTATTGGTCAAGATAATCATTCTCATATGAAAGAAGGCAAATCAGAGGTTCACACCACTAGAGTAAAACCAGGTGCTTCAAAAAACCACACACAATTAAGGTCCAATGTTGAAAATGGAGATTCTGCGAGTCCAATTAGGAGGGATGGTAATATGATTGCATTTGCACTCAAGGAAGCTCGGGATCTAAAACACAAGGCTAATCATTTGAAGGAAAAAGGACTTGAACTTGAAAGTATGGGCCTGTACTTTGAAGCGGCTTTGAAGTTTCTGCATGTTGCATCTCTTTGGGAAACTCCTAATCTGGACAATTCGAGATCAGGCGATGTTGCTCAGTCAATGAAGATGTATCCTGAAACTGCAAAACTCTGCAGCTTTTGTGCTCATGCCTATGAACGATGCAATAAAATGGCTTCTGCCGCTTTAGCATATAAATGTGTAGAAGTGGCTTACCTCAAAGCAGCGTATTACAAACACCCTAGTGCAAGCAAGGATCGACAAGAACTACAGTCGGTTGTACAGATAGC]
[+] EMBL CF197011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCTCCCAGACAGGTCTTGAACTTGGCGGAACCCACTAGGAGGGATGTTGCCTGTCTTCAGTCTTCTACGGTTGCAACTTCAAGCTCTTCAAAGGTCTCAAGCTCTCGGAGAAACAAAAATTCTCGAGAAGCAAAGGGCTCTCCCGTTGAATCAGTATCTTCATCACCACTGAAAAATTCAAACACTGATAAGATTTCTAAGGCCAGGAAAACTGGAAAAGATGGAGAATTGAATGCTGATTCAAGCATCTTGCATACCCCAATGAAATATCCAACCCACGAAGTTGGTTTACTACATACTGGGCAGCAAGCTGTGGGTGAAGCCATTCTGCGTGGTTCTACAAATAACTCCGGTATGGGGAGAGTAGATAATCAATNNNACCCTGGTGATAAAAAGATCTTGGATATGCATGGCCCTACACTACAACCTGATCAGCANGATTGTTTTAACCCGANNGCTANNGCTGATTCCACTNGACATAAAAGTAAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_3012#0 CCAGCAAAAAAGGAGATCCCTTCCAGTGTAAAGCATGGCACATTTCCAGGTTCTGAGGAA CAGCAGTTGCATATGCCGTCAAATGGCGGGATTATACCTGGACCTGCAAATGCAGCTTCT CTTCCTGCACCTGTTTTGATAGAGGATAATTGGGTATGCTGTGACATGTGTCATAAATGG CGTCTCCTCCCCTACGGGACAAACACTTCCATGCTTCCAAAAAAGTGGATATGCAGCATG CTTGACTGGCTACCTGGGATGAACAAATGCGACATTAGTGAGGATGAAACAACAAATGCT CTAAATGCACTTTATGTCGCTCAAATCCCTGCCGCTGGTGTTTCTTCAGGTGGCCCTCAC ACTGCGCATGCAAGTGTAGCAGCATCTAGCACCTACAATATAAGTGGACAACTGGGACAG AGTAGGAAAAGGAAAAATGCTCTGAAAGACGAAAACTGTTACGAGCATGATCAATAAGCC CCTGCAAAAATGACTCTCACGAGCAATCAACAAGCCCCTGCAAAAAATAGAGAAGTTGTT GATAGTGAACATTATACTAATGACAGAGATCCTGTAAGCACACATGATCTGGTGCCACAG AGCAAATCAGCTTCTGAAAGGCATAAGTCTAAGCACAAGAGTCGCAGTAGCCACTCAGAT GGAGGAGATCTTACAGAAAAATCGAAGAAGCATTCAAAATCAAAAAACAGGAGAGGAATT GATCGAGATGAGCACAAAACATCTAAGAAGACAAAAAAAGAGGATCGACATTACTTTAAC AAAGATTGGAAAAATGAATACGATTTAGCTGGCAACAAAGTTCGTGATGAAACCAAAGCT TTATCTGCAAAAGCAAAAATGTCAAAGGACTCATGTGAACAAGATGAGTTTTCTTTACGC AAGGAAAAAGCTTCAAGGTTTGATATTTTGGAAAAAACAAAGAGAATTAATGATGATGAT GTGGCCTTTCATGAGAAGATGAAAGAACATCGTGCAGGCATAGAAACATTAGATTTGTCT GGCAAAAAGAAGACAGTGAAGGAATGGGAGGATAACCGGCTCAGTTCAATGGACCACACA AGCAAAGGGGGCGATAATGAGAATTTGAACGAGAGATTATCAAAGATAAAGAAGTCCGAA GCTAGGCCTGAAGAAGTTCAGGATGCAAATGCATTATTTTCTTCTGCTGGAAGGCGTCAA GATAATGAGCTAGTTGCTGACAACAAATTTGTTACTTGTAAAGAAGGTCCATCAGAACTA TGGGATAATCAACCTCCCAGACAGGTCTTGAACTTGGCGGAACCCACTAGGAGGGATGTT GCCTGTCTTCAGTCTTCTACGGTTGCAACTTCAAGCTCTTCAAAGGTCTCAAGCTCTCGG AGAAACAAAAATTCTCGAGAAGCAAAGGGCTCTCCCGTTGAATCAGTATCTTCATCACCA CTGAAAAATTCAAACACTGATAAGATTTCTAAGGCCAGGAAAACTGGAAAAGATGGAGAA TTGAATGCTGATTCAAGCATCTTGCATACCCCAATGAAATATCCAACCCACGAAGTTGGT TTACTACATACTGGGCAGCAAGCTGTGGGTGAAGCCATTCTGCGTGGTTCTACAAATAAC TCCGGTATGGGGAGAGTAGATAATCAATTGTACCCTGGTGATAAAAAGATCTTGGATATG CATGGCCCTACACTACAACCTGATCAGCAGGATTGTTTTAACCCGAGGGCTACAGCTGAT TCCACTGGACATAAAAGTAAAAATAGTGCTCCTTCACGCCAAGGTAGAAATGGATCCAGT AACTTGATTTCAGAGGGAAATAAGCAGATAGAGATGTCATCCAGAAAAGAGAAATTACGT CCTAGTATTGATAATCAAGATATGCAAAAGTCTATTGGTCAAGATAATCATTCTCATATG AAAGAAGGCAAATCAGAGGTTCACACCACTAGAGTAAAACCAGGTGCTTCAAAAAACCAC ACACAATTAAGGTCCAATGTTGAAAATGGAGATTCTGCGAGTCCAATTAGGAGGGATGGT AATATGATTGCATTTGCACTCAAGGAAGCTCGGGATCTAAAACACAAGGCTAATCATTTG AAGGAAAAAGGACTTGAACTTGAAAGTATGGGCCTGTACTTTGAAGCGGCTTTGAAGTTT CTGCATGTTGCATCTCTTTGGGAAACTCCTAATCTGGACAATTCGAGATCAGGCGATGTT GCTCAGTCAATGAAGATGTATCCTGAAACTGCAAAACTCTGCAGCTTTTGTGCTCATGCC TATGAACGATGCAATAAAATGGCTTCTGCCGCTTTAGCATATAAATGTGTAGAAGTGGCT TACCTCAAAGCAGCGTATTACAAACACCCTAGTGCAAGCAAGGATCGACAAGAACTACAG TCGGTTGTACAGATAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)