cluster # 3019

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Oryza sativa
cluster # 3019 cluster # 3019 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3019#0 length = 1051 sequences # 2

consensusID : consensus_3019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1051
fasta sequence

                              [GACATTCAAGAGCATCGTTTGATACAGCGATGCCTTTTACCCCCAGGAGGCACACACAGTCAAGCCCAAGGAGTCCTGGAAGGCAATTTTCTGACAACCCCAGAAGACAAACTATTGCTGCTGCTGCTTCCCTATTTGGTGCTGATGATAGCTCCAATCCCAGACTTGATGAACTAAACAAGACCTTACAGGCACTCTGCATTGCAGCCCATGGATTGTGGATAGCATGGTTGTCCACTGAATTATCACAGCTTCTCTCATATGACCTCAACAAAGATGATTCATTGTCCTTATCAACCCCTTTACGGGGATGGGAAGTCACAGTCATCAAACAAGAGGAATCCACTGAGGGCCCCTTGGAGATGCAAATAGCACTTCCATCAATGCCTTCACTGTACATTATATCCTTTCTTTATCAAGCATGTTTGGAGATTCATAAAATTGGAGGGCACATCCTGGACAAATCTATATTGCAAAACTTTGCATGGGACTTGTTACAGAAGGTTATTGATATCTATGAAAGCTTTTTGGTATCAATCGAGTCTGGTAAATCTCTGGTTTCAGAAAAGGGGGTTCTGCAAATACTGCTCGATTTGCGCTTCATTGGCGATGTTCTGTCAGGAGGCAAAAGTTCTTCCACCAAAACTACTGAAACACAGAGAACACATGACTCTTCGCCAAGCGCCATTGCTAAGACTTCCTTCAGGAGAAAACAGTCACAATTGCAGGCAGATTCAGCTACCATAGAGCCTATAAACAAGCTGATCAATAAGTTCTCACAGAGATTGGATCCGATAGACTGGGCTACGTACGAACCTTATCTGTGGGAGAATGAGAAGCAATCTTACAAGCGCTATGTTGTTCTTTTCGGCTTCTTGGTTCAACTGAATCACATGTATACTGGAACTGTGCAAAAGTTACCAACTAAATCAAATACAGATTCAAACATTATGAGGTGCTCCCAAGTCCCAAGATTCAAATACCTACCGATCAGTGCCCCAGNTCTATCATCNNNNNNANANNNNTCATCATTACAGNNNNCNNNNGATGA]

[+] EMBL CF307226             [GACATTCAAGAGCATCGTTTGATACAGCGATGCCTTTTACCCCCAGGAGGCACACACAGTCAAGCCCAAGGAGTCCTGGAAGGCAATTTTCTGACAACCCCAGAAGACAAACTATTGCTGCTGCTGCTTCCCTATTTGGTGCTGATGATAGCTCCAATCCCAGACTTGATGAACTAAACAAGACCTTACAGGCACTCTGCATTGCAGCCCATGGATTGTGGATAGCATGGTTGTCCACTGAATTATCACAGCTTCTCTCATATGACCTCAACAAAGATGATTCATTGTCCTTATCAACCCCTTTACGGGGATGGGAAGTCACAGTCATCAAACAAGAGGAATCCACTGAGGGCCCCTTGGAGATGCAAATAGCACTTCCATCAATGCCTTCACTGTACATTATATCCTTTCTTTATCAAGCATGTTTGGAGATTCATAAAATTGGAGGGCACATCCTGGACAAATCTATATTGCAAAACTTTGCATGGGACTTGTTACAGAAGGTTATTGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF197127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTGCAAAACTTTGCATGGGACTTGTTACAGAAGGTTATTGATATCTATGAAAGCTTTTTGGTATCAATCGAGTCTGGTAAATCTCTGGTTTCAGAAAAGGGGGTTCTGCAAATACTGCTCGATTTGCGCTTCATTGGCGATGTTCTGTCAGGAGGCAAAAGTTCTTCCACCAAAACTACTGAAACACAGAGAACACATGACTCTTCGCCAAGCGCCATTGCTAAGACTTCCTTCAGGAGAAAACAGTCACAATTGCAGGCAGATTCAGCTACCATAGAGCCTATAAACAAGCTGATCAATAAGTTCTCACAGAGATTGGATCCGATAGACTGGGCTACGTACGAACCTTATCTGTGGGAGAATGAGAAGCAATCTTACAAGCGCTATGTTGTTCTTTTCGGCTTCTTGGTTCAACTGAATCACATGTATACTGGAACTGTGCAAAAGTTACCAACTAAATCAAATACAGATTCAAACATTATGAGGTGCTCCCAAGTCCCAAGATTCAAATACCTACCGATCAGTGCCCCAGNTCTATCATCNNNNNNANANNNNTCATCATTACAGNNNNCNNNNGATGA]




>consensus_3019#0
GACATTCAAGAGCATCGTTTGATACAGCGATGCCTTTTACCCCCAGGAGGCACACACAGT
CAAGCCCAAGGAGTCCTGGAAGGCAATTTTCTGACAACCCCAGAAGACAAACTATTGCTG
CTGCTGCTTCCCTATTTGGTGCTGATGATAGCTCCAATCCCAGACTTGATGAACTAAACA
AGACCTTACAGGCACTCTGCATTGCAGCCCATGGATTGTGGATAGCATGGTTGTCCACTG
AATTATCACAGCTTCTCTCATATGACCTCAACAAAGATGATTCATTGTCCTTATCAACCC
CTTTACGGGGATGGGAAGTCACAGTCATCAAACAAGAGGAATCCACTGAGGGCCCCTTGG
AGATGCAAATAGCACTTCCATCAATGCCTTCACTGTACATTATATCCTTTCTTTATCAAG
CATGTTTGGAGATTCATAAAATTGGAGGGCACATCCTGGACAAATCTATATTGCAAAACT
TTGCATGGGACTTGTTACAGAAGGTTATTGATATCTATGAAAGCTTTTTGGTATCAATCG
AGTCTGGTAAATCTCTGGTTTCAGAAAAGGGGGTTCTGCAAATACTGCTCGATTTGCGCT
TCATTGGCGATGTTCTGTCAGGAGGCAAAAGTTCTTCCACCAAAACTACTGAAACACAGA
GAACACATGACTCTTCGCCAAGCGCCATTGCTAAGACTTCCTTCAGGAGAAAACAGTCAC
AATTGCAGGCAGATTCAGCTACCATAGAGCCTATAAACAAGCTGATCAATAAGTTCTCAC
AGAGATTGGATCCGATAGACTGGGCTACGTACGAACCTTATCTGTGGGAGAATGAGAAGC
AATCTTACAAGCGCTATGTTGTTCTTTTCGGCTTCTTGGTTCAACTGAATCACATGTATA
CTGGAACTGTGCAAAAGTTACCAACTAAATCAAATACAGATTCAAACATTATGAGGTGCT
CCCAAGTCCCAAGATTCAAATACCTACCGATCAGTGCCCCAGNTCTATCATCNNNNNNAN
ANNNNTCATCATTACAGNNNNCNNNNGATGA

clustalw multiple alignements is not computed in this case