cluster # 3048

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Oryza sativa
cluster # 3048 cluster # 3048 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3048#0 length = 557 sequences # 2

consensusID : consensus_3048#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 557
fasta sequence

                              [CCGCAGAAGCCGGCGTCCTCCCCCCTCCCGCGACCGCCGCCGCCGCTCCGG-GAGGATGCCCCCGCTTTAGGTGCATCCCTGCATCAGGGATTCAGTGAGTTTCTGATGAATTGAGGACGAGGTGAAGATTGATGAGATGGACGGTACCATTGCCGATGCTGTGGGTGCGCCGGGTATAGAGAAAGAGGTCAATGGAAAGCCTGCATTGCCTGATAGCATGGAGGAGCATGAGGAAGCACATGAGGTGCAAGCCAATGGTGACCATTCCGGGGAGAGCGATGTGATCAACCCGCCCGAAGAGGCGGGCGGGGAATCCACCTCGCATCTTGATGGCAAGAAGCCTCGCCCTGCCAAGGCAACCCAAAGTCATGGTCCTAAGGTTGTAAAGTCTAGGAGCCCGAAGAGTGGAGGCGAGGGTCAAGCTAGGAGAAGCACTCCTAGTTCCACTCTTTCTAAGCACCGGTTGCTCGAGTCTCTCATGCAGATTCAAGTACTGGATCAAAGATCAATGGTGACTCCAGTGTTGATAGGAATAAAGCTGAGAAGCAAGAGCCTCG]

[+] EMBL OSR27911A            [CCGCAGAAGCCGGCGTCCTCCCCCCTCCCGCGACCGCCGCCGCCGCTCCGG GAGGATGCCCCCGCTTTAGGTGCATCCCTGCATCAGGGATTCAGTGAGTTTCTGATGAATTGAGGACGAGGTGAAGATTGATGAGATGGACGGTACCATTGCCGATGCTGTGGGTGCGCCGGGTATAGAGAAAGAGGTCAATGGAAAGCCTGCATTGCCTGATAGCATGGAGGAGCATGAGGAAGCACATGAGGTGCAAGCCAATGGTGACCATTCCGGGGAGAGCGATGTGATCAACCCGCCCGAAGAGGCG                                                                                                                                                                                                                                                             ]
[+] EMBL CF277092             [         CCGGCGTCCTCCCCCCTCCCGCGACCGCCGCCGCCGCTCCGGCGAGGATGCCCCCGCTTTAGGTGCGTCCCTGCATCAGGGATTCAGTGAGTTTCTGATGAATTGAGGACGAGGTGAAGATTGATGAGATGGACGGTACCATTGCCGATGCTGTGGGTGCGCCGGGTATAGAGAAAGAGGTCAATGGAAAGCCTGCATTGCCTGATAGCATGGAGGAGCATGAGGAAGCACATGAGGTGCAAGCCAATGGTGACCATTCCGGGGAGAGCGATGTGATCAACCCGCCCGAAGAGGCGGGCGGGGAATCCACCTCGCATCTTGATGGCAAGAAGCCTCGCCCTGCCAAGGCAACCCAAAGTCATGGTCCTAAGGTTGTAAAGTCTAGGAGCCCGAAGAGTGGAGGCGAGGGTCAAGCTAGGAGAAGCACTCCTAGTTCCACTCTTTCTAAGCACCGGTTGCTCGAGTCTCTCATGCAGATTCAAGTACTGGATCAAAGATCAATGGTGACTCCAGTGTTGATAGGAATAAAGCTGAGAAGCAAGAGCCTCG]




>consensus_3048#0
CCGCAGAAGCCGGCGTCCTCCCCCCTCCCGCGACCGCCGCCGCCGCTCCGGGAGGATGCC
CCCGCTTTAGGTGCATCCCTGCATCAGGGATTCAGTGAGTTTCTGATGAATTGAGGACGA
GGTGAAGATTGATGAGATGGACGGTACCATTGCCGATGCTGTGGGTGCGCCGGGTATAGA
GAAAGAGGTCAATGGAAAGCCTGCATTGCCTGATAGCATGGAGGAGCATGAGGAAGCACA
TGAGGTGCAAGCCAATGGTGACCATTCCGGGGAGAGCGATGTGATCAACCCGCCCGAAGA
GGCGGGCGGGGAATCCACCTCGCATCTTGATGGCAAGAAGCCTCGCCCTGCCAAGGCAAC
CCAAAGTCATGGTCCTAAGGTTGTAAAGTCTAGGAGCCCGAAGAGTGGAGGCGAGGGTCA
AGCTAGGAGAAGCACTCCTAGTTCCACTCTTTCTAAGCACCGGTTGCTCGAGTCTCTCAT
GCAGATTCAAGTACTGGATCAAAGATCAATGGTGACTCCAGTGTTGATAGGAATAAAGCT
GAGAAGCAAGAGCCTCG

clustalw multiple alignements is not computed in this case