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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3061 cluster # 3061       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3061#0 length = 1033 sequences # 2  

consensusID : consensus_3061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1033
fasta sequence
                              [AGGCAACATCTGCATGTTAATATGATTAATGTCCAGTTTGCCATATCTATGTTTAAGTGCAAATCTAGTCAGTAATGTCTAATGAAAACTATCCCATTTCCAGTAATATGTGTTTCAAAGTGTGTGCTCGTTGAGGAGATCAAGACATGGTTATTGCAAATTTTTCACTCTCTGCCCCTAATGAAATACTTTGAAAGAGGTAAATTGGTTGTATTATGGATTTGGTAGGGGTATGCAAGGTGTTCTATCATTAACTTCTGCTTTTTAGATTCAAAGGGCACAGCCGCACAGCTTCCCAGGCATCAAATCCAAGAACAAGAAGTAACGCTTACAGACCATGAAGTGCATACAAGACACATCACAAGGCGTACTTCAGAAAAAACAACATAACCCAAAACAAGAGCATGGCCAAGCATGTGTCTGTGCAGGACCAAAACACCAACCATAGATACCCAAAACCCCAGAAACCTCAACAAGACCAAAACTATTGTCCATACACTCCAGCATCAATCAATCTAGGAGGCTCTGAAATCTTTCTCAATGAGCGAGGAAGTAATCCATCTGCGGCAGCATCTTAACAAGGATTCCTTAGTGTGTGCTTGCAGTGGGCCATGGACAAAAAATGCAAAACAGAGGGGGTAACATAATTTTGNTTTAAATCTAGATTAGAGGATGGTAGGTAAGGTGTGGTTTAAAGAACAGAAAATTNAAGGGTCCCTTCCAAAGGGCAATGCAATAACAAGNTGAGACTAAATCAACTAGCAGGGTTGATGNCANTTAGNGGTTTTCAAACAGGAAATAAACGAAAAAATTGTAACATCTTTGGTCAAGAAGTAACAGAGATACAAAATGGAATTCAGTATCTCTAAAAGAAAATTTATGTCCTTAAAGCAAAAGTTGTCACTTGNTAATTTAGTAGAGCACACATCACCGGGAGATAGTTGCAAGAAAACAAGTCCAGACAATAATTGGTAAAGATAGGTAAATACACCAACCNTAACAGAGTGGCTGTCAAGCTGAATAGCTGNTCTAC]

[+] EMBL CA765227             [AGGCAACATCTGCATGTTAATATGATTAATGTCCAGTTTGCCATATCTATGTTTAAGTGCAAATCTAGTCAGTAATGTCTAATGAAAACTATCCCATTTCCAGTAATATGTGTTTCAAAGTGTGTGCTCGTTGAGGAGATCAAGACATGGTTATTGCAAATTTTTCACTCTCTGCCCCTAATGAAATACTTTGAAAGAGGTAAATTGGTTGTATTATGGATTTGGTAGGGGTATGCAAGGTGTTCTATCATTAACTTCTGCTTTTTAGATTCAAAGGGCACAGCCGCACAGCTTCCCAGGCATCAAATCCAAGAACAAGAAGTAACGCTTACAGACCATGAAGTGCATACAAGACACATCACAAGGCGTACTTCAGAAAAAACAACATAACCCAAAACAAGAGCATGGCCAAGCATGTGTCTGTGCAGGACCAAAACACCAACCATAGATACCCAAAACCCCAGAAACCTCAACAAGACCAAAACTATTGTCCATACACTCCAGCATCAATCAATCTAGGAGGCTCTGAAATCTTTCTCAATGAGCGAGGAAGTAATCCATCTGCGGCAGCATCTTAACAAGGATTCCTTAGTGTGTGCTTGCAGTGGGCCATGGACAAAAAATGCAAAACAGAGGGGGTAACATAATTTTGNTTTAAATCTAGATTAGAGGATGGTAGGTAAGGTGTGGTTTAAAGAACAGAAAATTNAAGGGTCCCTTCCAAAGGGCAATGCAATAACAAGNTGAGACTAAATCAACTAGCAGGGTTGATGNCANTTAGNGGTTT                                                                                                                                                                                                                                                      ]
[+] EMBL CB096783             [                                                                                                                                                                                                                                               GTGTTCTATNATTAACTTCTGCTTTTTAGATT NAAGGGCACAGCCGCACAGCTCCCCAGGCATCAAATCCAAGAACAAGAAGTAACGCTTACAGACCATGAAGTGCATACAAGACACATCACAAGGCGTACTTCAGAAAAAACAACATAACCCAAAACAAGAGCATGGCCAAGCATGTGTCTGTGCAGGACCAAAACACCAACCATAGATACCCAAGACCCCAGAAACCTCAACAAGACCAAAACTATTGTCCATACACTCCAGCATCAATCAATCTAGGAGGCTCTGAAAACTTTCTCAATGAGCGAGGAAGTAATCCATCTGCGGCAGCATCTTAACAAGGATTCCTTAGTGTGTGCTTGCAGTGGGCCATGGACAAAAAATGCAAAACAGAGGGGGTAACATAATTTTGTTTTAAATCTAGATTAGAGGATGTTAGGT AGGTGT GTTTAAAGAACAGAAAATTAAAGGGTCCC TCCAAAAGGCAATGCAATAACAAGTTGAGACTAAATCAACTAGCA GGTTGATGTCA TTAGTGTTTCTCAAACAGGAAATAAACGAAAAAATTGTAACATCTTTGGTCAAGAAGTAACAGAGATACAAAATGGAATTCAGTATCTCTAAAAGAAAATTTATGTCCTTAAAGCAAAAGTTGTCACTTGNTAATTTAGTAGAGCACACATCACCGGGAGATAGTTGCAAGAAAACAAGTCCAGACAATAATTGGTAAAGATAGGTAAATACACCAACCNTAACAGAGTGGCTGTCAAGCTGAATAGCTGNTCTAC]


>consensus_3061#0 AGGCAACATCTGCATGTTAATATGATTAATGTCCAGTTTGCCATATCTATGTTTAAGTGC AAATCTAGTCAGTAATGTCTAATGAAAACTATCCCATTTCCAGTAATATGTGTTTCAAAG TGTGTGCTCGTTGAGGAGATCAAGACATGGTTATTGCAAATTTTTCACTCTCTGCCCCTA ATGAAATACTTTGAAAGAGGTAAATTGGTTGTATTATGGATTTGGTAGGGGTATGCAAGG TGTTCTATCATTAACTTCTGCTTTTTAGATTCAAAGGGCACAGCCGCACAGCTTCCCAGG CATCAAATCCAAGAACAAGAAGTAACGCTTACAGACCATGAAGTGCATACAAGACACATC ACAAGGCGTACTTCAGAAAAAACAACATAACCCAAAACAAGAGCATGGCCAAGCATGTGT CTGTGCAGGACCAAAACACCAACCATAGATACCCAAAACCCCAGAAACCTCAACAAGACC AAAACTATTGTCCATACACTCCAGCATCAATCAATCTAGGAGGCTCTGAAATCTTTCTCA ATGAGCGAGGAAGTAATCCATCTGCGGCAGCATCTTAACAAGGATTCCTTAGTGTGTGCT TGCAGTGGGCCATGGACAAAAAATGCAAAACAGAGGGGGTAACATAATTTTGNTTTAAAT CTAGATTAGAGGATGGTAGGTAAGGTGTGGTTTAAAGAACAGAAAATTNAAGGGTCCCTT CCAAAGGGCAATGCAATAACAAGNTGAGACTAAATCAACTAGCAGGGTTGATGNCANTTA GNGGTTTTCAAACAGGAAATAAACGAAAAAATTGTAACATCTTTGGTCAAGAAGTAACAG AGATACAAAATGGAATTCAGTATCTCTAAAAGAAAATTTATGTCCTTAAAGCAAAAGTTG TCACTTGNTAATTTAGTAGAGCACACATCACCGGGAGATAGTTGCAAGAAAACAAGTCCA GACAATAATTGGTAAAGATAGGTAAATACACCAACCNTAACAGAGTGGCTGTCAAGCTGA ATAGCTGNTCTAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)