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Oryza sativa
cluster # 3096 cluster # 3096       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3096#0 length = 2917 sequences # 1  
 consensus_3096#1 length = 1675 sequences # 1  
consensusID : consensus_3096#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2917
fasta sequence 
                              [AACGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGGCGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTGCCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTCCCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCATCGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATTGTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATATTTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCCATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAAAAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACTTACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCCTTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCGAAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTATATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGATTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGATCATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTGGAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCATCCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGGTATTTGTTTTTTTAGTTTATTATTTAAGAGTTTGTCCTAAAATATAGCTACTTCTCAATATGCTTTTTTTTTTGTCTCAACTAATAATAACCATCCTTCATGTAATTTCTTCACTTACTCATCTAAACCAATCACATTTATTCTCATTTAATTTTACCTCTATTCTTAATTCTGTAAAAAAAATTTAAAGGTACCTATATTTTTAAGATGGAAATAGAATCTATTTGGATGCTGATGTATGGTTTCAAGCTTATGATTAGCACATAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCCTGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGTCTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGTGAATCCCAATGTACAAATTATTACTCGAGTGCTATTTGTAGAAGTAATTCAAAGGACAATGATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGCTGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAATCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTCCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCCTCACAAATGAGCCCTTCTAAACGTCCTCAATGTGACCTGGCGTGTCCATAATGAGTCAGGACACGATAAGCAATCAGATCACCTGCACCGATGCATTGCACAGGCACAGCTCCAAAGAATATATTAGTTGTCCTCCGTTTCATTTGGATTCTCCGCAAGGGGATCGCACATTGAGATGAACGTGGATTGTCCGTACTACTCGTCGGCGCGAGCGCGACGCCTCCTCCCTCCTCCGCGCCATCTCCCGTCGCACCAGGTCAGGAGCCTGACGCGTCGCCGTCGATCCGCGGGAGGAAGAGAGGCGGCAGCGTACCACTACTAGTCTACTACCGCTGCGCTGCCGTCCTCGACGTCGACACCGCGCGCGCGCAAGCAGGTGAGACGCCGCTGCTCCTGGTGGCCACGTTCGGCCACACCGCGAGACGCGGCGGCCGGCCTACCTACCTCCTGGAGCGCGCCGCCGGCCCGTCCACGCCTGACCCCGACGTACGGCGGCGACATCACAACGCCGCCGCCGCCTCCTGTCTCGCTCTCCAGGCGGTGAGCCACGGCGCGCCATAAGCCAGCGTGCTCAGCGCCGGCCCCTTGGTTCCCCGCGAACAATCCTGACCCCACGGCGAGTCGGCGACGTCGACGGATACTGAGAGTGCATCCACCCCCGTCAGCCACAGCTGCCTCGGTGTCCACCAGCCTAGCAAGCAAGCCATGTCGCCCATGGCCATGCCGGCTGCCAATCTGCCCGGCGCCCCACGGCGCGTCGTCAGCGAGTCGGCGGCTCGGCGCCGTGCTGGCTTGGGCATGGGCTGTCGGACCAGAAAGAACGGTTTGCATAATTGCATTGTCGTGTACTCGTTCGTATCGGGTGAGAATGTCACCAATGGAAGCGTAAAGAGAGCAAGTACGTTTTCTTCTTCAGAATTCGCCTAGATTCGTCCGTTCGTTTTCTTTGAGTGTGCTTGTTCAGTTGTATATCCTCCTTTCTACATGGCTACATCTGTAAATGCAAAGTACTCCTACATGGAACTAGTATGGATGGAACTGCTGCCCCATCCTTGAT]

[+] EMBL AK109475             [AACGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGGCGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTGCCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTCCCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCATCGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATTGTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATATTTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCCATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAAAAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACTTACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCCTTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCGAAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTATATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGATTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGATCATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTGGAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCATCCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGGTATTTGTTTTTTTAGTTTATTATTTAAGAGTTTGTCCTAAAATATAGCTACTTCTCAATATGCTTTTTTTTTTGTCTCAACTAATAATAACCATCCTTCATGTAATTTCTTCACTTACTCATCTAAACCAATCACATTTATTCTCATTTAATTTTACCTCTATTCTTAATTCTGTAAAAAAAATTTAAAGGTACCTATATTTTTAAGATGGAAATAGAATCTATTTGGATGCTGATGTATGGTTTCAAGCTTATGATTAGCACATAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCCTGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGTCTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGTGAATCCCAATGTACAAATTATTACTCGAGTGCTATTTGTAGAAGTAATTCAAAGGACAATGATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGCTGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAATCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTCCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCCTCACAAATGAGCCCTTCTAAACGTCCTCAATGTGACCTGGCGTGTCCATAATGAGTCAGGACACGATAAGCAATCAGATCACCTGCACCGATGCATTGCACAGGCACAGCTCCAAAGAATATATTAGTTGTCCTCCGTTTCATTTGGATTCTCCGCAAGGGGATCGCACATTGAGATGAACGTGGATTGTCCGTACTACTCGTCGGCGCGAGCGCGACGCCTCCTCCCTCCTCCGCGCCATCTCCCGTCGCACCAGGTCAGGAGCCTGACGCGTCGCCGTCGATCCGCGGGAGGAAGAGAGGCGGCAGCGTACCACTACTAGTCTACTACCGCTGCGCTGCCGTCCTCGACGTCGACACCGCGCGCGCGCAAGCAGGTGAGACGCCGCTGCTCCTGGTGGCCACGTTCGGCCACACCGCGAGACGCGGCGGCCGGCCTACCTACCTCCTGGAGCGCGCCGCCGGCCCGTCCACGCCTGACCCCGACGTACGGCGGCGACATCACAACGCCGCCGCCGCCTCCTGTCTCGCTCTCCAGGCGGTGAGCCACGGCGCGCCATAAGCCAGCGTGCTCAGCGCCGGCCCCTTGGTTCCCCGCGAACAATCCTGACCCCACGGCGAGTCGGCGACGTCGACGGATACTGAGAGTGCATCCACCCCCGTCAGCCACAGCTGCCTCGGTGTCCACCAGCCTAGCAAGCAAGCCATGTCGCCCATGGCCATGCCGGCTGCCAATCTGCCCGGCGCCCCACGGCGCGTCGTCAGCGAGTCGGCGGCTCGGCGCCGTGCTGGCTTGGGCATGGGCTGTCGGACCAGAAAGAACGGTTTGCATAATTGCATTGTCGTGTACTCGTTCGTATCGGGTGAGAATGTCACCAATGGAAGCGTAAAGAGAGCAAGTACGTTTTCTTCTTCAGAATTCGCCTAGATTCGTCCGTTCGTTTTCTTTGAGTGTGCTTGTTCAGTTGTATATCCTCCTTTCTACATGGCTACATCTGTAAATGCAAAGTACTCCTACATGGAACTAGTATGGATGGAACTGCTGCCCCATCCTTGAT]




>consensus_3096#0
AACGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGG
CGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTG
CCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTC
CCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCAT
CGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATT
GTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATAT
TTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCC
ATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAA
AAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACT
TACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCC
TTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCG
AAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTAT
ATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGA
TTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGAT
CATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTG
GAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCAT
CCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGGTATTTGTTTTTTT
AGTTTATTATTTAAGAGTTTGTCCTAAAATATAGCTACTTCTCAATATGCTTTTTTTTTT
GTCTCAACTAATAATAACCATCCTTCATGTAATTTCTTCACTTACTCATCTAAACCAATC
ACATTTATTCTCATTTAATTTTACCTCTATTCTTAATTCTGTAAAAAAAATTTAAAGGTA
CCTATATTTTTAAGATGGAAATAGAATCTATTTGGATGCTGATGTATGGTTTCAAGCTTA
TGATTAGCACATAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCC
TGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGT
CTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGT
GAATCCCAATGTACAAATTATTACTCGAGTGCTATTTGTAGAAGTAATTCAAAGGACAAT
GATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGC
TGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAA
TCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTCCG
GTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGC
GTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATG
TTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCC
TCACAAATGAGCCCTTCTAAACGTCCTCAATGTGACCTGGCGTGTCCATAATGAGTCAGG
ACACGATAAGCAATCAGATCACCTGCACCGATGCATTGCACAGGCACAGCTCCAAAGAAT
ATATTAGTTGTCCTCCGTTTCATTTGGATTCTCCGCAAGGGGATCGCACATTGAGATGAA
CGTGGATTGTCCGTACTACTCGTCGGCGCGAGCGCGACGCCTCCTCCCTCCTCCGCGCCA
TCTCCCGTCGCACCAGGTCAGGAGCCTGACGCGTCGCCGTCGATCCGCGGGAGGAAGAGA
GGCGGCAGCGTACCACTACTAGTCTACTACCGCTGCGCTGCCGTCCTCGACGTCGACACC
GCGCGCGCGCAAGCAGGTGAGACGCCGCTGCTCCTGGTGGCCACGTTCGGCCACACCGCG
AGACGCGGCGGCCGGCCTACCTACCTCCTGGAGCGCGCCGCCGGCCCGTCCACGCCTGAC
CCCGACGTACGGCGGCGACATCACAACGCCGCCGCCGCCTCCTGTCTCGCTCTCCAGGCG
GTGAGCCACGGCGCGCCATAAGCCAGCGTGCTCAGCGCCGGCCCCTTGGTTCCCCGCGAA
CAATCCTGACCCCACGGCGAGTCGGCGACGTCGACGGATACTGAGAGTGCATCCACCCCC
GTCAGCCACAGCTGCCTCGGTGTCCACCAGCCTAGCAAGCAAGCCATGTCGCCCATGGCC
ATGCCGGCTGCCAATCTGCCCGGCGCCCCACGGCGCGTCGTCAGCGAGTCGGCGGCTCGG
CGCCGTGCTGGCTTGGGCATGGGCTGTCGGACCAGAAAGAACGGTTTGCATAATTGCATT
GTCGTGTACTCGTTCGTATCGGGTGAGAATGTCACCAATGGAAGCGTAAAGAGAGCAAGT
ACGTTTTCTTCTTCAGAATTCGCCTAGATTCGTCCGTTCGTTTTCTTTGAGTGTGCTTGT
TCAGTTGTATATCCTCCTTTCTACATGGCTACATCTGTAAATGCAAAGTACTCCTACATG
GAACTAGTATGGATGGAACTGCTGCCCCATCCTTGAT

consensusID : consensus_3096#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1675
fasta sequence 
                              [CGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGGCGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTGCCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTCCCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCATCGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATTGTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATATTTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCCATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAAAAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACTTACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCCTTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCGAAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTATATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGATTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGATCATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTGGAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCATCCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCCTGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGTCTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGTGAATCCCAATGTACAAATTATTACTCGAGTGCTTTTTGTAGAAGTAATTCAAAGGACAATGATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGCTGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAATCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTTAATGATTGTCTTTCATTACTTCTTCTCAATGCTGTAATGCTAGTAGATTAATACTATCTTAATGTGTGACACAGGTCCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCCTCACAAAT]

[+] EMBL AK107515             [CGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGGCGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTGCCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTCCCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCATCGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATTGTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATATTTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCCATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAAAAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACTTACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCCTTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCGAAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTATATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGATTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGATCATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTGGAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCATCCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCCTGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGTCTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGTGAATCCCAATGTACAAATTATTACTCGAGTGCTTTTTGTAGAAGTAATTCAAAGGACAATGATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGCTGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAATCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTTAATGATTGTCTTTCATTACTTCTTCTCAATGCTGTAATGCTAGTAGATTAATACTATCTTAATGTGTGACACAGGTCCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCCTCACAAAT]




>consensus_3096#1
CGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGGCG
CTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTGCC
GCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTCCC
CCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCATCG
GCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATTGT
CAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATATTT
CTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCCAT
GTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAAAA
GGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACTTA
CTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCCTT
TTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCGAA
GGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTATAT
TCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGATT
TGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGATCA
TCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTGGA
GATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCATCC
AGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGTTACTGGTGTAGGCAT
GATACCACTTGAAGATGCACTAGGAACCCCTGAAACTGATGATTTTATAGCTGTACTCAC
TCATGAGCCCCAGGTGCCCCAGTTCGAGGTCTCTTACCTGATTTTGCAAGTGAGGAATGA
GTTTGAAATTTACTCTCTTAGATCCATGGTGAATCCCAATGTACAAATTATTACTCGAGT
GCTTTTTGTAGAAGTAATTCAAAGGACAATGATGCGGATTGAGCGTGACCACTACATTCA
AATTCTTTTACAAGCCTCGGGGATAGCTGCTGCAGAACCATACCCATTGATGCTTAGGGA
TGTTGAAATTCACTACCAGACCATCCGTAATCAGCATGAAGCTCTCCCGTAATAGAGCTG
CAACACTGGCATGCACTTCTTCTCAGTTAATGATTGTCTTTCATTACTTCTTCTCAATGC
TGTAATGCTAGTAGATTAATACTATCTTAATGTGTGACACAGGTCCGGTGCCAAGGCACA
GAAACTTGAGGCGAAGAGATATGACAACTGATTGAACTGAGTTGAGCGTATAGGAGTGGA
GATGTGACGACAGAATTCAGAAGAGAGATGTGTTCTCCGTTTGGATGTTGCAGTAGTATG
CTTGTACGGTTCTACCACATACTACTCCGTATTGTAGTAGTATGTCCTCACAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3096#0      AACGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGG 60
consensus_3096#1      --CGCAAGCGCGATGGGCTACGGCTTCTCCACCAAGCTCACGGCCTTCTTCTGGCCATGG 58
                        **********************************************************

consensus_3096#0      CGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTG 120
consensus_3096#1      CGCTTCTCGCCGTGGCGCTTCTCGCCGCCGCCCTCCACGCCGATGCCGCGCCCGCATCTG 118
                      ************************************************************

consensus_3096#0      CCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTC 180
consensus_3096#1      CCGCCCCCGGGAGCTCCTTCCCCGACGCCTATGGCGACCGCGCCCGCGCTGCACAACTTC 178
                      ************************************************************

consensus_3096#0      CCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCAT 240
consensus_3096#1      CCCCACGCAAGCAGCAGCCGCAGGTCGCCTACGCTCTGCGACGGGCTTCCGCTACCTCAT 238
                      ************************************************************

consensus_3096#0      CGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATT 300
consensus_3096#1      CGGCACATCTCCACGGCGCCACCTCCCGGTCCTTCACCGGCGTCGCCACCGAAGACCATT 298
                      ************************************************************

consensus_3096#0      GTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATAT 360
consensus_3096#1      GTCAAGCTCGCATCATCTATTGGCACGGTGGTCCCTGTGGCTTTATCTATAGTACCATAT 358
                      ************************************************************

consensus_3096#0      TTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCC 420
consensus_3096#1      TTCTACCAAGTCTACACAGGAAATTTTGAGAGGACAATAGAAGTGTATGGTGCCCCCGCC 418
                      ************************************************************

consensus_3096#0      ATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAA 480
consensus_3096#1      ATGTTGGCTGGATCAATTAACAGCATAATTTGGTTGACGTATTCAATAATGGCCAGCAAA 478
                      ************************************************************

consensus_3096#0      AAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACT 540
consensus_3096#1      AAGGATCTTAACCTTGCTCTTATCCTGATGCATGCATTACTTTGCATGTCGACATTCACT 538
                      ************************************************************

consensus_3096#0      TACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCC 600
consensus_3096#1      TACTTGATGTGTATCTGTGCTTGTAAAAGAGCCACTAAAGAGGGTTATATTCTTGGAGCC 598
                      ************************************************************

consensus_3096#0      TTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCG 660
consensus_3096#1      TTTTTCATAGGATGCTTATCAGCCATATCCATTGTTGTGCACTGGGACTTAAACCCATCG 658
                      ************************************************************

consensus_3096#0      AAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTAT 720
consensus_3096#1      AAGGTTGTGAAGATTATATTCAGATGTTTTGGTGGAATTAGTTTGCTGTCTTGCCACTAT 718
                      ************************************************************

consensus_3096#0      ATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGA 780
consensus_3096#1      ATTCTGCTGAATGATATTTTGGGGAGTGTTCCCAAAAGATCTCAGAAAGTTGCTACTGGA 778
                      ************************************************************

consensus_3096#0      TTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGAT 840
consensus_3096#1      TTTGACCTTATTCTAAGTTGTATAACGAACTTGGTGACTTTCATCATAACTTTTCATGAT 838
                      ************************************************************

consensus_3096#0      CATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTG 900
consensus_3096#1      CATCCTGAGCACACTACTTCTCTGATCACTTCTGGAGTAGGGTTTGTCCTCAATGTTGTG 898
                      ************************************************************

consensus_3096#0      GAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCAT 960
consensus_3096#1      GAGATCGTACTTCTTGTCATAGTAACAATTATGGGCTACTTCTTTCCATTGTCTGAGCAT 958
                      ************************************************************

consensus_3096#0      CCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAGGTATTTGTTTTTTT 1020
consensus_3096#1      CCAGATGCTGATGTTGAAGCGTCACGTCACATATCAGCCACAAGAG-------------- 1004
                      **********************************************              

consensus_3096#0      AGTTTATTATTTAAGAGTTTGTCCTAAAATATAGCTACTTCTCAATATGCTTTTTTTTTT 1080
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GTCTCAACTAATAATAACCATCCTTCATGTAATTTCTTCACTTACTCATCTAAACCAATC 1140
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      ACATTTATTCTCATTTAATTTTACCTCTATTCTTAATTCTGTAAAAAAAATTTAAAGGTA 1200
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CCTATATTTTTAAGATGGAAATAGAATCTATTTGGATGCTGATGTATGGTTTCAAGCTTA 1260
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      TGATTAGCACATAGTTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCC 1320
consensus_3096#1      --------------TTACTGGTGTAGGCATGATACCACTTGAAGATGCACTAGGAACCCC 1050
                                    **********************************************

consensus_3096#0      TGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGT 1380
consensus_3096#1      TGAAACTGATGATTTTATAGCTGTACTCACTCATGAGCCCCAGGTGCCCCAGTTCGAGGT 1110
                      ************************************************************

consensus_3096#0      CTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGT 1440
consensus_3096#1      CTCTTACCTGATTTTGCAAGTGAGGAATGAGTTTGAAATTTACTCTCTTAGATCCATGGT 1170
                      ************************************************************

consensus_3096#0      GAATCCCAATGTACAAATTATTACTCGAGTGCTATTTGTAGAAGTAATTCAAAGGACAAT 1500
consensus_3096#1      GAATCCCAATGTACAAATTATTACTCGAGTGCTTTTTGTAGAAGTAATTCAAAGGACAAT 1230
                      ********************************* **************************

consensus_3096#0      GATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGC 1560
consensus_3096#1      GATGCGGATTGAGCGTGACCACTACATTCAAATTCTTTTACAAGCCTCGGGGATAGCTGC 1290
                      ************************************************************

consensus_3096#0      TGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAA 1620
consensus_3096#1      TGCAGAACCATACCCATTGATGCTTAGGGATGTTGAAATTCACTACCAGACCATCCGTAA 1350
                      ************************************************************

consensus_3096#0      TCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGT--- 1677
consensus_3096#1      TCAGCATGAAGCTCTCCCGTAATAGAGCTGCAACACTGGCATGCACTTCTTCTCAGTTAA 1410
                      *********************************************************   

consensus_3096#0      ------------------------------------------------------------
consensus_3096#1      TGATTGTCTTTCATTACTTCTTCTCAATGCTGTAATGCTAGTAGATTAATACTATCTTAA 1470
                                                                                  

consensus_3096#0      --------------CCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTG 1723
consensus_3096#1      TGTGTGACACAGGTCCGGTGCCAAGGCACAGAAACTTGAGGCGAAGAGATATGACAACTG 1530
                                    **********************************************

consensus_3096#0      ATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATG 1783
consensus_3096#1      ATTGAACTGAGTTGAGCGTATAGGAGTGGAGATGTGACGACAGAATTCAGAAGAGAGATG 1590
                      ************************************************************

consensus_3096#0      TGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGT 1843
consensus_3096#1      TGTTCTCCGTTTGGATGTTGCAGTAGTATGCTTGTACGGTTCTACCACATACTACTCCGT 1650
                      ************************************************************

consensus_3096#0      ATTGTAGTAGTATGTCCTCACAAATGAGCCCTTCTAAACGTCCTCAATGTGACCTGGCGT 1903
consensus_3096#1      ATTGTAGTAGTATGTCCTCACAAAT----------------------------------- 1675
                      *************************                                   

consensus_3096#0      GTCCATAATGAGTCAGGACACGATAAGCAATCAGATCACCTGCACCGATGCATTGCACAG 1963
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GCACAGCTCCAAAGAATATATTAGTTGTCCTCCGTTTCATTTGGATTCTCCGCAAGGGGA 2023
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      TCGCACATTGAGATGAACGTGGATTGTCCGTACTACTCGTCGGCGCGAGCGCGACGCCTC 2083
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CTCCCTCCTCCGCGCCATCTCCCGTCGCACCAGGTCAGGAGCCTGACGCGTCGCCGTCGA 2143
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      TCCGCGGGAGGAAGAGAGGCGGCAGCGTACCACTACTAGTCTACTACCGCTGCGCTGCCG 2203
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      TCCTCGACGTCGACACCGCGCGCGCGCAAGCAGGTGAGACGCCGCTGCTCCTGGTGGCCA 2263
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CGTTCGGCCACACCGCGAGACGCGGCGGCCGGCCTACCTACCTCCTGGAGCGCGCCGCCG 2323
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GCCCGTCCACGCCTGACCCCGACGTACGGCGGCGACATCACAACGCCGCCGCCGCCTCCT 2383
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GTCTCGCTCTCCAGGCGGTGAGCCACGGCGCGCCATAAGCCAGCGTGCTCAGCGCCGGCC 2443
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CCTTGGTTCCCCGCGAACAATCCTGACCCCACGGCGAGTCGGCGACGTCGACGGATACTG 2503
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      AGAGTGCATCCACCCCCGTCAGCCACAGCTGCCTCGGTGTCCACCAGCCTAGCAAGCAAG 2563
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CCATGTCGCCCATGGCCATGCCGGCTGCCAATCTGCCCGGCGCCCCACGGCGCGTCGTCA 2623
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GCGAGTCGGCGGCTCGGCGCCGTGCTGGCTTGGGCATGGGCTGTCGGACCAGAAAGAACG 2683
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GTTTGCATAATTGCATTGTCGTGTACTCGTTCGTATCGGGTGAGAATGTCACCAATGGAA 2743
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      GCGTAAAGAGAGCAAGTACGTTTTCTTCTTCAGAATTCGCCTAGATTCGTCCGTTCGTTT 2803
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      TCTTTGAGTGTGCTTGTTCAGTTGTATATCCTCCTTTCTACATGGCTACATCTGTAAATG 2863
consensus_3096#1      ------------------------------------------------------------
                                                                                  

consensus_3096#0      CAAAGTACTCCTACATGGAACTAGTATGGATGGAACTGCTGCCCCATCCTTGAT 2917
consensus_3096#1      ------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)