cluster # 3107

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Oryza sativa
cluster # 3107 cluster # 3107 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3107#0 length = 1879 sequences # 2
consensusID : consensus_3107#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1879
fasta sequence
                              [CCGTTGCAACCTCATCTCCGCTCCTCTTCCTCCTCCTCGTCGTCGTTGTCGTCGTCGGCGGCGCATCCAGCCTCGACGTGCCGGCGGCGGTGGGTGGCGGGGCAGCAGACGAGCAAGAAAGAGATCCCTAGTCTCTCTCGATGGCGACGGACGCTCCCCCAAGCCGGCGCCGCCGCGCCTCAACGTGCCGCCGGCGATGGCGGGGGGGCTCCGCCTCGATCCCGCCGTCGCCTCCCCGGCCCGCCTCCTCCTCGACGTCCCCAAGACGCCATCCCCTTCCAAGACCACGTACAGCGACCGCTTCATCCCCTGCCGCTCCTCCTCCCGCCTCCACAACCTCGCCCTCCTCGACCGCGACCGCGCCTCCCCCTCCTCCACCACCGACGACGCCCCCTACTCCCGCCTCCTCCGCGCCGAGATCTTCGGCCCGGACTCCCCCTCCCCGGCTCCCTCCTCCCCCAACACCAACCTCTTCCGCTTCAAGACCGACCACCCCTCGCCCAAATCGCCCTTCGCCGCCTCCGCCGCCGCCACCGCCGGCCACTACGACTGCACCGCCGGCTCCGCTGAATCCTCCACGCCGCGCAAGCCGCCCAGGAAGGTCCCCAAGACCCCGCACAAGGTCCTGGACGCGCCGTCGCTGCAGGACGACTTCTACCTCAATCTTGTCGACTGGTCGTCGCAGAACACGCTCGCCGTCGGCCTCGGGAATTGCGTCTACCTCTGGTCGGCTTCCAATTGCAAGGTCACCAAGCTCTGCGATTTGGGGCCCAGGGACAGCGTCTGCGCTGTGCACTGGACCCGAGAAGGCTCCTATCTTGCCATCGGCACCAGCCTTGGCGATGTCCAGATTTGGGATAGCTCTCGCTGTAAACGGATTAGGAACATGGGAGGACACCAAACACGGACTGGTGTATTAGCATGGAGCTCCCGAATCTTGTCCTCCGGTAGCAGGGACAAGAACATATTGCAGCATGACATCCGTGTCCCAAGTGACTATATCAGCAAGTTCTCAGGGCACAGATCAGAGGTCTGTGGACTGAAATGGTCGCACGACGACCGTGAGCTTGCATCCGGTGGAAATGATAATCAGCTGCTAGTATGGAACCAACGTTCGCAGCAGCCGATATTGAGGCTGACAGAACACACAGCTGCAGTTAAAGCAATAGCATGGTCACCACATCAGCAAGGCCTCCTGGCATCAGGTGGTGGAACCGCTGATAGGTGTATCAGGTTCTGGAACACGGTTAATGGAAACATGCTGAATTCAGTGGACACAGGCAGCCAGGTTTGTAATCTTGCCTGGTGTAAAAATGTAAATGAGCTTGTGAGCACTCATGGGTATTCCCAAAACCAAATCATGGTGTGGAAGTACCCATCTATGTCAAAGGTTGCTACTCTAACTGGACACACGCTGCGAGTGCTTTACCTTGCAATGTCACCTGATGGACAGACAATAGTAACAGGAGCCGGGGATGAAACCCTCAGATTTTGGAATATTTTTCCTTCAATGAAGACACAGGCTCCTGTTCGTGATATTGGGCTCTGGTCATTCTCGAGAAGCCACATACGGTGACCATAATAGGAGGCAAAGAAAATGCATATGTTTGTATGAAACATAATTTTCTGAACTTGTGCAGTTCTTCAGCGATTTGTAAATTGTGAGGCCTAATTATTCATTTATTGTTTGTGTGCGCGTGTGTGTCTGTGAGATCGAGAGAAAGGGAGGAGAACTCATATTAACATAACCAATTCTTTGTATTAGAAGCTCATAAGTCGGCTAGTTTCTTGTTTGGAATTTCATTGCAGAGAAACAAGGGCCTTGTAATTTATCACAAACTTATATGCTTGTATTATTCTCACACACTTTGTGGCCATT]

[+] EMBL AK109536             [CCGTTGCAACCTCATCTCCGCTCCTCTTCCTCCTCCTCGTCGTCGTTGTCGTCGTCGGCGGCGCATCCAGCCTCGACGTGCCGGCGGCGGTGGGTGGCGGGGCAGCAGACGAGCAAGAAAGAGATCCCTAGTCTCTCTCGATGGCGACGGACGCTCCCCCAAGCCGGCGCCGCCGCGCCTCAACGTGCCGCCGGCGATGGCGGGGGGGCTCCGCCTCGATCCCGCCGTCGCCTCCCCGGCCCGCCTCCTCCTCGACGTCCCCAAGACGCCATCCCCTTCCAAGACCACGTACAGCGACCGCTTCATCCCCTGCCGCTCCTCCTCCCGCCTCCACAACCTCGCCCTCCTCGACCGCGACCGCGCCTCCCCCTCCTCCACCACCGACGACGCCCCCTACTCCCGCCTCCTCCGCGCCGAGATCTTCGGCCCGGACTCCCCCTCCCCGGCTCCCTCCTCCCCCAACACCAACCTCTTCCGCTTCAAGACCGACCACCCCTCGCCCAAATCGCCCTTCGCCGCCTCCGCCGCCGCCACCGCCGGCCACTACGACTGCACCGCCGGCTCCGCTGAATCCTCCACGCCGCGCAAGCCGCCCAGGAAGGTCCCCAAGACCCCGCACAAGGTCCTGGACGCGCCGTCGCTGCAGGACGACTTCTACCTCAATCTTGTCGACTGGTCGTCGCAGAACACGCTCGCCGTCGGCCTCGGGAATTGCGTCTACCTCTGGTCGGCTTCCAATTGCAAGGTCACCAAGCTCTGCGATTTGGGGCCCAGGGACAGCGTCTGCGCTGTGCACTGGACCCGAGAAGGCTCCTATCTTGCCATCGGCACCAGCCTTGGCGATGTCCAGATTTGGGATAGCTCTCGCTGTAAACGGATTAGGAACATGGGAGGACACCAAACACGGACTGGTGTATTAGCATGGAGCTCCCGAATCTTGTCCTCCGGTAGCAGGGACAAGAACATATTGCAGCATGACATCCGTGTCCCAAGTGACTATATCAGCAAGTTCTCAGGGCACAGATCAGAGGTCTGTGGACTGAAATGGTCGCACGACGACCGTGAGCTTGCATCCGGTGGAAATGATAATCAGCTGCTAGTATGGAACCAACGTTCGCAGCAGCCGATATTGAGGCTGACAGAACACACAGCTGCAGTTAAAGCAATAGCATGGTCACCACATCAGCAAGGCCTCCTGGCATCAGGTGGTGGAACCGCTGATAGGTGTATCAGGTTCTGGAACACGGTTAATGGAAACATGCTGAATTCAGTGGACACAGGCAGCCAGGTTTGTAATCTTGCCTGGTGTAAAAATGTAAATGAGCTTGTGAGCACTCATGGGTATTCCCAAAACCAAATCATGGTGTGGAAGTACCCATCTATGTCAAAGGTTGCTACTCTAACTGGACACACGCTGCGAGTGCTTTACCTTGCAATGTCACCTGATGGACAGACAATAGTAACAGGAGCCGGGGATGAAACCCTCAGATTTTGGAATATTTTTCCTTCAATGAAGACACAGGCTCCTGTTCGTGATATTGGGCTCTGGTCATTCTCGAGAAGCCACATACGGTGACCATAATAGGAGGCAAAGAAAATGCATATGTTTGTATGAAACATAATTTTCTGAACTTGTGCAGTTCTTCAGCGATTTGTAAATTGTGAGGCCTAATTATTCATTTATTGTTTGTGTGCGCGTGTGTGTCTGTGAGATCGAGAGAAAGGGAGGAGAACTCATATTAACATAACCAATTCTTTGTATTAGAAGCTCATAAGTCGGCTAGTTTCTTGTTTGGAATTTCATTGCAGAGAAACAAGGGCCTTGTAATTTATCACAAACTTATATGCTTGTATTATTCTCACACACTTTGTGGCCATT]
[+] EMBL CA765455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAGCCAGGTTTGTAATCTTGCCTGGTGTAAAAATGTAAATGAGCTTGTGAGCACTCATGGGTATTCCCAAAACCAAATCATGGTGTGGAAGTACCCATCTATGTCAAAGGTTGCTACTCTAACTGGACACACGCTGCGAGTGCTTTACCTTGCAATGTCACCTGATGGACAGACAATAGTAACAGGAGCCGGGGATGAAACCCTCAGATTTTGGAATATTTTTCCTTCAATGAAGACACAGGCTCCTGTTCGTGATATTGGGCTCTGGTCATTCTCGAGAAGCCACATACGGTGACCATAATAGGAGGCAAAGAAAATGCATATGTTTGTATGAAACATAATTTTCTGAACTTGTGCAGTTCTTCAGCGATTTGTAAATTGTGAGGCCTAATTATTCATTTATTGTTTGTGTGCGCGTGTGTGTCTGTGAGATCGAGAGAAAGGGAGAAGAACTCATATTAACATAACCAATTCTTTGTATTAGAAGCTCATAAGTCGGCTAGTTTCTTGTTTGGAATTTCATTGCAGAGAAACAAGGGCCTTGTAATTTATCACAAAC                                       ]




>consensus_3107#0
CCGTTGCAACCTCATCTCCGCTCCTCTTCCTCCTCCTCGTCGTCGTTGTCGTCGTCGGCG
GCGCATCCAGCCTCGACGTGCCGGCGGCGGTGGGTGGCGGGGCAGCAGACGAGCAAGAAA
GAGATCCCTAGTCTCTCTCGATGGCGACGGACGCTCCCCCAAGCCGGCGCCGCCGCGCCT
CAACGTGCCGCCGGCGATGGCGGGGGGGCTCCGCCTCGATCCCGCCGTCGCCTCCCCGGC
CCGCCTCCTCCTCGACGTCCCCAAGACGCCATCCCCTTCCAAGACCACGTACAGCGACCG
CTTCATCCCCTGCCGCTCCTCCTCCCGCCTCCACAACCTCGCCCTCCTCGACCGCGACCG
CGCCTCCCCCTCCTCCACCACCGACGACGCCCCCTACTCCCGCCTCCTCCGCGCCGAGAT
CTTCGGCCCGGACTCCCCCTCCCCGGCTCCCTCCTCCCCCAACACCAACCTCTTCCGCTT
CAAGACCGACCACCCCTCGCCCAAATCGCCCTTCGCCGCCTCCGCCGCCGCCACCGCCGG
CCACTACGACTGCACCGCCGGCTCCGCTGAATCCTCCACGCCGCGCAAGCCGCCCAGGAA
GGTCCCCAAGACCCCGCACAAGGTCCTGGACGCGCCGTCGCTGCAGGACGACTTCTACCT
CAATCTTGTCGACTGGTCGTCGCAGAACACGCTCGCCGTCGGCCTCGGGAATTGCGTCTA
CCTCTGGTCGGCTTCCAATTGCAAGGTCACCAAGCTCTGCGATTTGGGGCCCAGGGACAG
CGTCTGCGCTGTGCACTGGACCCGAGAAGGCTCCTATCTTGCCATCGGCACCAGCCTTGG
CGATGTCCAGATTTGGGATAGCTCTCGCTGTAAACGGATTAGGAACATGGGAGGACACCA
AACACGGACTGGTGTATTAGCATGGAGCTCCCGAATCTTGTCCTCCGGTAGCAGGGACAA
GAACATATTGCAGCATGACATCCGTGTCCCAAGTGACTATATCAGCAAGTTCTCAGGGCA
CAGATCAGAGGTCTGTGGACTGAAATGGTCGCACGACGACCGTGAGCTTGCATCCGGTGG
AAATGATAATCAGCTGCTAGTATGGAACCAACGTTCGCAGCAGCCGATATTGAGGCTGAC
AGAACACACAGCTGCAGTTAAAGCAATAGCATGGTCACCACATCAGCAAGGCCTCCTGGC
ATCAGGTGGTGGAACCGCTGATAGGTGTATCAGGTTCTGGAACACGGTTAATGGAAACAT
GCTGAATTCAGTGGACACAGGCAGCCAGGTTTGTAATCTTGCCTGGTGTAAAAATGTAAA
TGAGCTTGTGAGCACTCATGGGTATTCCCAAAACCAAATCATGGTGTGGAAGTACCCATC
TATGTCAAAGGTTGCTACTCTAACTGGACACACGCTGCGAGTGCTTTACCTTGCAATGTC
ACCTGATGGACAGACAATAGTAACAGGAGCCGGGGATGAAACCCTCAGATTTTGGAATAT
TTTTCCTTCAATGAAGACACAGGCTCCTGTTCGTGATATTGGGCTCTGGTCATTCTCGAG
AAGCCACATACGGTGACCATAATAGGAGGCAAAGAAAATGCATATGTTTGTATGAAACAT
AATTTTCTGAACTTGTGCAGTTCTTCAGCGATTTGTAAATTGTGAGGCCTAATTATTCAT
TTATTGTTTGTGTGCGCGTGTGTGTCTGTGAGATCGAGAGAAAGGGAGGAGAACTCATAT
TAACATAACCAATTCTTTGTATTAGAAGCTCATAAGTCGGCTAGTTTCTTGTTTGGAATT
TCATTGCAGAGAAACAAGGGCCTTGTAATTTATCACAAACTTATATGCTTGTATTATTCT
CACACACTTTGTGGCCATT
clustalw multiple alignements is not computed in this case