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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3108 cluster # 3108       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3108#0 length = 908 sequences # 2  

consensusID : consensus_3108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 908
fasta sequence
                              [AGGAACCCAGAACACTCTTCTCAATCTTTAACCCGAAGATGTTTGATCCATTTCTTGTCTTCTCTGGTGATCTTAGGCGCATTTCATCCATGGAAACGTGATCTTCTACCTCTACCTGATCCATCTGTGTGTGAAATCTCATTTTGCACAGGTCGAACACCCTGCGTCGAGCTCATCGTCGCTCCCGACGTCGCGATGCCGTTCCCGTCCATCCGGTGGGTCTCTGGCCGAACCACTGCGCCATCATCATCACAAAGGTTCCAGAAAGCTGCTTACTGAAGCAATCGACCCAAGACACCGCCGTTGAAGAGATCGCCGTCGTCTTCCTCAAGTCCGGCTACCGGCTATCGTCGTCGAATCCTTGCATCCGAGCCGAAGCATGGGGAGTGGTCGTCGCCGTCGCTCTGCCATTCTTTGCCGCCGCCGGAGTACTTCTAAGGTCGCCATCGCCGTCCATCCATCACCGACCTACAGGCGACCTTCCACTAGTGGTCACCGCCGCTCGCGCTGTTTCCGGCATCCATCCCGGCCATCTCCGGCGACAAGACGAACATCGTCGGATGCGCAAGAGCCTGGTGCACTTTTCTCCTTTTGGGTGCGACGTCAGAATCCCCGCCGTTCGCCGCCGACGTCGACGTCAAGCCCGCCGGCCGGTGAAGCTCTGCTGCTGCTGCTGTTTCCTCCTCTGCCGAGCCTATGACAGGTGGTCCCCACTTCATTAAGCATTAAGAACTGTGATTAGAAATAGATCAAAGCATATGGGGTTCTATTTGTAAATAACTAGAGCATGACATGTGGGACCTAGACCTAATTATAAATACATAAAACTTTGAGTAGTCTTAATGAAGATTCAATTAAAACGAGCTAGGTACCTCGGGACCTATTCCTAGAACCTCGAGGGACCTTTC]

[+] EMBL AK108068             [AGGAACCCAGAACACTCTTCTCAATCTTTAACCCGAAGATGTTTGATCCATTTCTTGTCTTCTCTGGTGATCTTAGGCGCATTTCATCCATGGAAACGTGATCTTCTACCTCTACCTGATCCATCTGTGTGTGAAATCTCATTTTGCACAGGTCGAACACCCTGCGTCGAGCTCATCGTCGCTCCCGACGTCGCGATGCCGTTCCCGTCCATCCGGTGGGTCTCTGGCCGAACCACTGCGCCATCATCATCACAAAGGTTCCAGAAAGCTGCTTACTGAAGCAATCGACCCAAGACACCGCCGTTGAAGAGATCGCCGTCGTCTTCCTCAAGTCCGGCTACCGGCTATCGTCGTCGAATCCTTGCATCCGAGCCGAAGCATGGGGAGTGGTCGTCGCCGTCGCTCTGCCATTCTTTGCCGCCGCCGGAGTACTTCTAAGGTCGCCATCGCCGTCCATCCATCACCGACCTACAGGCGACCTTCCACTAGTGGTCACCGCCGCTCGCGCTGTTTCCGGCATCCATCCCGGCCATCTCCGGCGACAAGACGAACATCGTCGGATGCGCAAGAGCCTGGTGCACTTTTCTCCTTTTGGGTGCGACGTCAGAATCCCCGCCGTTCGCCGCCGACGTCGACGTCAAGCCCGCCGGCCGGTGAAGCTCTGCTGCTGCTGCTGTTTCCTCCTCTGCCGAGCCTATGACAGGTGGTCCCCACTTCATTAAGCATTAAGAACTGTGATTAGAAATAGATCAAAGCATATGGGGTTCTATTTGTAAATAACTAGAGCATGACATGTGGGACCTAGACCTAATTATAAATACATAA                                                                                   ]
[+] EMBL CA765458             [                                                                                                                                                                                                                                                                                                                                                                                                         TCGCCGTCGCTCTGCCATTCTTTGCCGACGCCGGAGTACTTCTAAGGTCGCCATCGCCGTCCATCCATCACCGACCTACAGGCGACCTTCCACTAGTGGTCACCGCCGCTCGCGCTGTTTCCGGCATCCATCCCGGCCATCTCCGGCGACAAGACGAACATCGTCGGATGCGCAAGAGCCTGGTTCAGTTTTCTCCTTTTGGGTGCGACGTCAGAGTCCCCGCCGTTCGCCGCCGACGTCGACGTCAAGCCCGCCGGCCGGTGAAGCTCTGCTGCTGCTGCTGTTTCCTCCTCTGCCGAGCCTATGACAGGTGGTCCCCACTTCATTAAGCATTAAGAACTGTGATTAGAAATAGATCAAAGCATATGGGGTTCTATTTGTAAATAACTAGAGCATGACATGTGGGACCTAGACCTCATTATAAATACATAAAACTTTGAGTAGTCTTAATGAAGATTCAATTAAAACGAGCTAGGTACCTCGGGACCTATTCCTAGAACCTCGAGGGACCTTTC]


>consensus_3108#0 AGGAACCCAGAACACTCTTCTCAATCTTTAACCCGAAGATGTTTGATCCATTTCTTGTCT TCTCTGGTGATCTTAGGCGCATTTCATCCATGGAAACGTGATCTTCTACCTCTACCTGAT CCATCTGTGTGTGAAATCTCATTTTGCACAGGTCGAACACCCTGCGTCGAGCTCATCGTC GCTCCCGACGTCGCGATGCCGTTCCCGTCCATCCGGTGGGTCTCTGGCCGAACCACTGCG CCATCATCATCACAAAGGTTCCAGAAAGCTGCTTACTGAAGCAATCGACCCAAGACACCG CCGTTGAAGAGATCGCCGTCGTCTTCCTCAAGTCCGGCTACCGGCTATCGTCGTCGAATC CTTGCATCCGAGCCGAAGCATGGGGAGTGGTCGTCGCCGTCGCTCTGCCATTCTTTGCCG CCGCCGGAGTACTTCTAAGGTCGCCATCGCCGTCCATCCATCACCGACCTACAGGCGACC TTCCACTAGTGGTCACCGCCGCTCGCGCTGTTTCCGGCATCCATCCCGGCCATCTCCGGC GACAAGACGAACATCGTCGGATGCGCAAGAGCCTGGTGCACTTTTCTCCTTTTGGGTGCG ACGTCAGAATCCCCGCCGTTCGCCGCCGACGTCGACGTCAAGCCCGCCGGCCGGTGAAGC TCTGCTGCTGCTGCTGTTTCCTCCTCTGCCGAGCCTATGACAGGTGGTCCCCACTTCATT AAGCATTAAGAACTGTGATTAGAAATAGATCAAAGCATATGGGGTTCTATTTGTAAATAA CTAGAGCATGACATGTGGGACCTAGACCTAATTATAAATACATAAAACTTTGAGTAGTCT TAATGAAGATTCAATTAAAACGAGCTAGGTACCTCGGGACCTATTCCTAGAACCTCGAGG GACCTTTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)