cluster # 3109

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Oryza sativa
cluster # 3109 cluster # 3109 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3109#0 length = 2863 sequences # 1

consensus_3109#1 length = 637 sequences # 1

consensusID : consensus_3109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2863
fasta sequence

                              [TTCTACAATAGCCACTGCATCCTTCTGTTCAGAGGAAGCCAGGATGAGAATCCCAGCATCACGAAATGGAAACACCCCTATTACCACGTTGTCCGGTATTTCCATCTTCGTTTCCTTCCTACCATAGCAAGCAATTTGTCTAAAACTACCTGTCCTTTCATCCTTGGATTCTCACCACCAATGGTTTGTGTTCAGTGAATGATCTAACCATGCGTCATTCACAGTTCTTCGTTCTTGTCTTTACTCTCATGATTTTCTCTTTGTTCCAGACTTGCCAATCCAACCATGAGCATGTCGTTTGCTCTGAATGCTGAGCCAAACACTGTGTGGTATAATAACCGCTCCCTCCTCCAGAATACATTTTCAGATGACAATTTCTTGATGCGCATCTTCCTCCCTCATGACATTGCAGTTCCAAGTATAAATGATAGCATCGTTCCTTCATTTGCTTGCGGGTTCTTCTGTGCAGGATCTGCAACCAGCTGTGATGCCTACATTTTTTCCATCTTCTTTGTCTATGTTAGCACCGATTTCAGTCAGCGGCTGCGGTGGCCCGAGATAGTCTGGTTTGCCAACCGTGATCATCCAGTTGGAGAGAATGCTACTGTTCAATTTACTGAACTTGGGGATTTAGTGCTCTATGATGCAGATGGAACACTTGTTTGGTCCACCAATACAGCGAACAAGTCTGTTGTCAGCATGAACCTTACAGGGTCAGGAAATCTGGTATTGTTAGACCGCACAAATGTGGAGGTCTGGAGATCCTTCGATCACCCAACTGACACGCTTGTCATTTCTCAGACACTACAGATGGGTCAGAAGCTTGTGGCAAGAACTTCGTCGACAAACTGGACTGAGGGAAAATTGTACCTCACCGAGTCACCGTCCTCGCTGATGGCATGTATGCATTTGCATTGCATACTACCGGAGCCCCACTGGTGGAACTGTTGCAACAAACATGTCAGCTTACGTTGCACTCAAGAATGGTAGCCTTGAGGTGTTCACTTCTTTCCAGGAGACAAAGGCGCCTGATTACCACATCCAGCTGCCTGAGAATTCCTTTGGGCTGGAGTTTGCAAGGCTAGATTGGGATGGGCACATGAGACTATATCAGTGGATCAATTACAGTGCCTGGGTGCCTTCAGATATTTTTGACATAACTGACCCTTGTGCTTATCCTCTAGCTTGTGGAGAGTATGGTATTTGCTCGCATGGACAGTGCAGCTGCCCAGATGTAGCCATTGGGCAATCAGGATTGTTTGAGCTGGTCGATGCCAAGGGAGTTAACCATGGCTGCTTTCTGACGTCTTCATTGACTTGTGGGTCAGCCAGGAAGACTAGGTTTCTTGCTGTTCCCAATGTCACCCACTTCAATTTTGTCTACAATTGGACAACAAATGAAGATCATTGCAAACTATCATGCATGGATGATTGTTCTTGTCGGGCTTCATTTTTCCAGCATAAGGACATTTCTTCTGGTTTCTGTTTTCTTGCATTCAACATATTTTCGATGATAAATTTTAGTGCACAAAGTTATTCAAGTAACTTTAGTTCTTCTGCTTTTCTCAAAATTCAGGACTCTACCCACAAATCCTTATTATCTAAAGAGAAAAGAGCAATCGTTTTGGTTGCTGGTTCTTTGAGTTTTGTTACTTCAGTTATTGTTGCAGTGCTTATAGTTCTGAGAAGAAAGAGAGACAAACCATTAGAAGATGAATATTTTATTGATCAGCTTCCAGGGCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAAGATTGGGGCAGGGGGATTTGGTTCTGTTTTTGAAGGACAGATCGGTGATAAGCATGTTGCTGTCAAGAGATTGGATAGCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGTTCAGACAATTGGAAGCATTAACCACATACACCTGGTGAGGCTAATCGGATTTTGTGTTGAAAAAACTCATAGGCTTCTTGTCTATGAGTACATGCCTAATGGATCTTTGGATAAATGGATTTTTCAGAATCACCAAGCTGATCCACTTGATTGGAAAACCAGATTGAAGATTATCTCTGATGTAGCCAAGGCATTAGCTTATCTTCATAGTGATTGCCGACAAACAATAGCTCATCTGGACATCAAGCCAGAAAATATACTTTTGGATGAGGTGTTCACTGCAAAGATATCTGACTTTGGACTTGCCAAACTGATTGACCGTGAGCAAAGCAGTGTCATGACTAGATTAAGAGGCAGACTGGGTTACTTAGCCCCTGAGTGGTTGACATCTGTGATCACTGAAAAGGTTGATGTGTATAGCTTTGGCGTTGTGATAATGGAAATTTTATGCAGCAGAAGGAATTTGGACTACTCGCAGCCTGAAGAAAGCTGCCATCTCATCAGCATGTTGCAGGAGAAGGCCAAAAATAACCAGTTGATGGACCTTATCGATCCATGTTTCTTTGATATGGAATTACATATGGATGATGTTTTATGAATGATGAATTTAGCAATGTGGTGCTTGCAAGTCGATAACAATAGAAGGCCTTCCATGTCCATGGTGGTCAAAATCCTGGAAGGTACCATGGATGTTGAAACTGAACTTGATTTTGACCTGGTAAACATAGACCCGATGGTAGTAGCACATCGAGCAGCTCAAAGGAACAGTATTACTTTGCAGGTAGACTCTGTCCTTTCAGGGCCAAGATGAAATACAAGGAGCTCAAATATATTCTTCAAAGATATCAAGCTCAAGATTGAAAACACGTACTCCTGTTTTCCTATACTATGGCATTTAGATAAACAAAGATGTAGACATGTAGTGATGTACTATAGTGATAATGATTTT]

[+] EMBL AK065388             [TTCTACAATAGCCACTGCATCCTTCTGTTCAGAGGAAGCCAGGATGAGAATCCCAGCATCACGAAATGGAAACACCCCTATTACCACGTTGTCCGGTATTTCCATCTTCGTTTCCTTCCTACCATAGCAAGCAATTTGTCTAAAACTACCTGTCCTTTCATCCTTGGATTCTCACCACCAATGGTTTGTGTTCAGTGAATGATCTAACCATGCGTCATTCACAGTTCTTCGTTCTTGTCTTTACTCTCATGATTTTCTCTTTGTTCCAGACTTGCCAATCCAACCATGAGCATGTCGTTTGCTCTGAATGCTGAGCCAAACACTGTGTGGTATAATAACCGCTCCCTCCTCCAGAATACATTTTCAGATGACAATTTCTTGATGCGCATCTTCCTCCCTCATGACATTGCAGTTCCAAGTATAAATGATAGCATCGTTCCTTCATTTGCTTGCGGGTTCTTCTGTGCAGGATCTGCAACCAGCTGTGATGCCTACATTTTTTCCATCTTCTTTGTCTATGTTAGCACCGATTTCAGTCAGCGGCTGCGGTGGCCCGAGATAGTCTGGTTTGCCAACCGTGATCATCCAGTTGGAGAGAATGCTACTGTTCAATTTACTGAACTTGGGGATTTAGTGCTCTATGATGCAGATGGAACACTTGTTTGGTCCACCAATACAGCGAACAAGTCTGTTGTCAGCATGAACCTTACAGGGTCAGGAAATCTGGTATTGTTAGACCGCACAAATGTGGAGGTCTGGAGATCCTTCGATCACCCAACTGACACGCTTGTCATTTCTCAGACACTACAGATGGGTCAGAAGCTTGTGGCAAGAACTTCGTCGACAAACTGGACTGAGGGAAAATTGTACCTCACCGAGTCACCGTCCTCGCTGATGGCATGTATGCATTTGCATTGCATACTACCGGAGCCCCACTGGTGGAACTGTTGCAACAAACATGTCAGCTTACGTTGCACTCAAGAATGGTAGCCTTGAGGTGTTCACTTCTTTCCAGGAGACAAAGGCGCCTGATTACCACATCCAGCTGCCTGAGAATTCCTTTGGGCTGGAGTTTGCAAGGCTAGATTGGGATGGGCACATGAGACTATATCAGTGGATCAATTACAGTGCCTGGGTGCCTTCAGATATTTTTGACATAACTGACCCTTGTGCTTATCCTCTAGCTTGTGGAGAGTATGGTATTTGCTCGCATGGACAGTGCAGCTGCCCAGATGTAGCCATTGGGCAATCAGGATTGTTTGAGCTGGTCGATGCCAAGGGAGTTAACCATGGCTGCTTTCTGACGTCTTCATTGACTTGTGGGTCAGCCAGGAAGACTAGGTTTCTTGCTGTTCCCAATGTCACCCACTTCAATTTTGTCTACAATTGGACAACAAATGAAGATCATTGCAAACTATCATGCATGGATGATTGTTCTTGTCGGGCTTCATTTTTCCAGCATAAGGACATTTCTTCTGGTTTCTGTTTTCTTGCATTCAACATATTTTCGATGATAAATTTTAGTGCACAAAGTTATTCAAGTAACTTTAGTTCTTCTGCTTTTCTCAAAATTCAGGACTCTACCCACAAATCCTTATTATCTAAAGAGAAAAGAGCAATCGTTTTGGTTGCTGGTTCTTTGAGTTTTGTTACTTCAGTTATTGTTGCAGTGCTTATAGTTCTGAGAAGAAAGAGAGACAAACCATTAGAAGATGAATATTTTATTGATCAGCTTCCAGGGCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAAGATTGGGGCAGGGGGATTTGGTTCTGTTTTTGAAGGACAGATCGGTGATAAGCATGTTGCTGTCAAGAGATTGGATAGCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGTTCAGACAATTGGAAGCATTAACCACATACACCTGGTGAGGCTAATCGGATTTTGTGTTGAAAAAACTCATAGGCTTCTTGTCTATGAGTACATGCCTAATGGATCTTTGGATAAATGGATTTTTCAGAATCACCAAGCTGATCCACTTGATTGGAAAACCAGATTGAAGATTATCTCTGATGTAGCCAAGGCATTAGCTTATCTTCATAGTGATTGCCGACAAACAATAGCTCATCTGGACATCAAGCCAGAAAATATACTTTTGGATGAGGTGTTCACTGCAAAGATATCTGACTTTGGACTTGCCAAACTGATTGACCGTGAGCAAAGCAGTGTCATGACTAGATTAAGAGGCAGACTGGGTTACTTAGCCCCTGAGTGGTTGACATCTGTGATCACTGAAAAGGTTGATGTGTATAGCTTTGGCGTTGTGATAATGGAAATTTTATGCAGCAGAAGGAATTTGGACTACTCGCAGCCTGAAGAAAGCTGCCATCTCATCAGCATGTTGCAGGAGAAGGCCAAAAATAACCAGTTGATGGACCTTATCGATCCATGTTTCTTTGATATGGAATTACATATGGATGATGTTTTATGAATGATGAATTTAGCAATGTGGTGCTTGCAAGTCGATAACAATAGAAGGCCTTCCATGTCCATGGTGGTCAAAATCCTGGAAGGTACCATGGATGTTGAAACTGAACTTGATTTTGACCTGGTAAACATAGACCCGATGGTAGTAGCACATCGAGCAGCTCAAAGGAACAGTATTACTTTGCAGGTAGACTCTGTCCTTTCAGGGCCAAGATGAAATACAAGGAGCTCAAATATATTCTTCAAAGATATCAAGCTCAAGATTGAAAACACGTACTCCTGTTTTCCTATACTATGGCATTTAGATAAACAAAGATGTAGACATGTAGTGATGTACTATAGTGATAATGATTTT]




>consensus_3109#0
TTCTACAATAGCCACTGCATCCTTCTGTTCAGAGGAAGCCAGGATGAGAATCCCAGCATC
ACGAAATGGAAACACCCCTATTACCACGTTGTCCGGTATTTCCATCTTCGTTTCCTTCCT
ACCATAGCAAGCAATTTGTCTAAAACTACCTGTCCTTTCATCCTTGGATTCTCACCACCA
ATGGTTTGTGTTCAGTGAATGATCTAACCATGCGTCATTCACAGTTCTTCGTTCTTGTCT
TTACTCTCATGATTTTCTCTTTGTTCCAGACTTGCCAATCCAACCATGAGCATGTCGTTT
GCTCTGAATGCTGAGCCAAACACTGTGTGGTATAATAACCGCTCCCTCCTCCAGAATACA
TTTTCAGATGACAATTTCTTGATGCGCATCTTCCTCCCTCATGACATTGCAGTTCCAAGT
ATAAATGATAGCATCGTTCCTTCATTTGCTTGCGGGTTCTTCTGTGCAGGATCTGCAACC
AGCTGTGATGCCTACATTTTTTCCATCTTCTTTGTCTATGTTAGCACCGATTTCAGTCAG
CGGCTGCGGTGGCCCGAGATAGTCTGGTTTGCCAACCGTGATCATCCAGTTGGAGAGAAT
GCTACTGTTCAATTTACTGAACTTGGGGATTTAGTGCTCTATGATGCAGATGGAACACTT
GTTTGGTCCACCAATACAGCGAACAAGTCTGTTGTCAGCATGAACCTTACAGGGTCAGGA
AATCTGGTATTGTTAGACCGCACAAATGTGGAGGTCTGGAGATCCTTCGATCACCCAACT
GACACGCTTGTCATTTCTCAGACACTACAGATGGGTCAGAAGCTTGTGGCAAGAACTTCG
TCGACAAACTGGACTGAGGGAAAATTGTACCTCACCGAGTCACCGTCCTCGCTGATGGCA
TGTATGCATTTGCATTGCATACTACCGGAGCCCCACTGGTGGAACTGTTGCAACAAACAT
GTCAGCTTACGTTGCACTCAAGAATGGTAGCCTTGAGGTGTTCACTTCTTTCCAGGAGAC
AAAGGCGCCTGATTACCACATCCAGCTGCCTGAGAATTCCTTTGGGCTGGAGTTTGCAAG
GCTAGATTGGGATGGGCACATGAGACTATATCAGTGGATCAATTACAGTGCCTGGGTGCC
TTCAGATATTTTTGACATAACTGACCCTTGTGCTTATCCTCTAGCTTGTGGAGAGTATGG
TATTTGCTCGCATGGACAGTGCAGCTGCCCAGATGTAGCCATTGGGCAATCAGGATTGTT
TGAGCTGGTCGATGCCAAGGGAGTTAACCATGGCTGCTTTCTGACGTCTTCATTGACTTG
TGGGTCAGCCAGGAAGACTAGGTTTCTTGCTGTTCCCAATGTCACCCACTTCAATTTTGT
CTACAATTGGACAACAAATGAAGATCATTGCAAACTATCATGCATGGATGATTGTTCTTG
TCGGGCTTCATTTTTCCAGCATAAGGACATTTCTTCTGGTTTCTGTTTTCTTGCATTCAA
CATATTTTCGATGATAAATTTTAGTGCACAAAGTTATTCAAGTAACTTTAGTTCTTCTGC
TTTTCTCAAAATTCAGGACTCTACCCACAAATCCTTATTATCTAAAGAGAAAAGAGCAAT
CGTTTTGGTTGCTGGTTCTTTGAGTTTTGTTACTTCAGTTATTGTTGCAGTGCTTATAGT
TCTGAGAAGAAAGAGAGACAAACCATTAGAAGATGAATATTTTATTGATCAGCTTCCAGG
GCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAA
GATTGGGGCAGGGGGATTTGGTTCTGTTTTTGAAGGACAGATCGGTGATAAGCATGTTGC
TGTCAAGAGATTGGATAGCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGTTCAGAC
AATTGGAAGCATTAACCACATACACCTGGTGAGGCTAATCGGATTTTGTGTTGAAAAAAC
TCATAGGCTTCTTGTCTATGAGTACATGCCTAATGGATCTTTGGATAAATGGATTTTTCA
GAATCACCAAGCTGATCCACTTGATTGGAAAACCAGATTGAAGATTATCTCTGATGTAGC
CAAGGCATTAGCTTATCTTCATAGTGATTGCCGACAAACAATAGCTCATCTGGACATCAA
GCCAGAAAATATACTTTTGGATGAGGTGTTCACTGCAAAGATATCTGACTTTGGACTTGC
CAAACTGATTGACCGTGAGCAAAGCAGTGTCATGACTAGATTAAGAGGCAGACTGGGTTA
CTTAGCCCCTGAGTGGTTGACATCTGTGATCACTGAAAAGGTTGATGTGTATAGCTTTGG
CGTTGTGATAATGGAAATTTTATGCAGCAGAAGGAATTTGGACTACTCGCAGCCTGAAGA
AAGCTGCCATCTCATCAGCATGTTGCAGGAGAAGGCCAAAAATAACCAGTTGATGGACCT
TATCGATCCATGTTTCTTTGATATGGAATTACATATGGATGATGTTTTATGAATGATGAA
TTTAGCAATGTGGTGCTTGCAAGTCGATAACAATAGAAGGCCTTCCATGTCCATGGTGGT
CAAAATCCTGGAAGGTACCATGGATGTTGAAACTGAACTTGATTTTGACCTGGTAAACAT
AGACCCGATGGTAGTAGCACATCGAGCAGCTCAAAGGAACAGTATTACTTTGCAGGTAGA
CTCTGTCCTTTCAGGGCCAAGATGAAATACAAGGAGCTCAAATATATTCTTCAAAGATAT
CAAGCTCAAGATTGAAAACACGTACTCCTGTTTTCCTATACTATGGCATTTAGATAAACA
AAGATGTAGACATGTAGTGATGTACTATAGTGATAATGATTTT

consensusID : consensus_3109#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence

                              [ACCNGGNTNCTTGCTGTTCCCAACATCACATACTTCAATTTTGTCTACAATTGGNCAACAAATGAAGATCACTGCAAACTATCATGCATGGNTGATTGTTCTTGCCGGGCTTCATTTTTCCAATATGAGGATACTTCTTCTGGNTTCTGTTTTCTTGCNTCNGNNGTATTTTTGATGGCTTATAGTTCTGAGAAGAAAGAGAGATGAACCGTTAGAAGATGAATATTTTATTGATCAGCTTCCAGGGCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAAGATTGGGGCAGGGGGATTTGGTTCTATTTTTGAAGGACAGATCGGTGATAAGCATGTTGCTGTCNAGAGATTGGACATCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGGTCAGACCATTGGAAGCATTAACCACATACACCTGGNGAGGCTAATCGGATTTTGGGGTGAAAAAAACTCACAGGCTTCTTGNCTATCAGGACATGACTAATGGATCTTTTGGATAAATGGATTTTTCAAAATCAACAAGGCTGATCTACTTGANTGGGGAGCTAAATTGANGATATCTCTGATGNAGCNAANGGATTAACNTATNCTCACAGGACTG]

[+] EMBL CA765460             [ACCNGGNTNCTTGCTGTTCCCAACATCACATACTTCAATTTTGTCTACAATTGGNCAACAAATGAAGATCACTGCAAACTATCATGCATGGNTGATTGTTCTTGCCGGGCTTCATTTTTCCAATATGAGGATACTTCTTCTGGNTTCTGTTTTCTTGCNTCNGNNGTATTTTTGATGGCTTATAGTTCTGAGAAGAAAGAGAGATGAACCGTTAGAAGATGAATATTTTATTGATCAGCTTCCAGGGCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAAGATTGGGGCAGGGGGATTTGGTTCTATTTTTGAAGGACAGATCGGTGATAAGCATGTTGCTGTCNAGAGATTGGACATCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGGTCAGACCATTGGAAGCATTAACCACATACACCTGGNGAGGCTAATCGGATTTTGGGGTGAAAAAAACTCACAGGCTTCTTGNCTATCAGGACATGACTAATGGATCTTTTGGATAAATGGATTTTTCAAAATCAACAAGGCTGATCTACTTGANTGGGGAGCTAAATTGANGATATCTCTGATGNAGCNAANGGATTAACNTATNCTCACAGGACTG]




>consensus_3109#1
ACCNGGNTNCTTGCTGTTCCCAACATCACATACTTCAATTTTGTCTACAATTGGNCAACA
AATGAAGATCACTGCAAACTATCATGCATGGNTGATTGTTCTTGCCGGGCTTCATTTTTC
CAATATGAGGATACTTCTTCTGGNTTCTGTTTTCTTGCNTCNGNNGTATTTTTGATGGCT
TATAGTTCTGAGAAGAAAGAGAGATGAACCGTTAGAAGATGAATATTTTATTGATCAGCT
TCCAGGGCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTC
AAGAAAGATTGGGGCAGGGGGATTTGGTTCTATTTTTGAAGGACAGATCGGTGATAAGCA
TGTTGCTGTCNAGAGATTGGACATCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGG
TCAGACCATTGGAAGCATTAACCACATACACCTGGNGAGGCTAATCGGATTTTGGGGTGA
AAAAAACTCACAGGCTTCTTGNCTATCAGGACATGACTAATGGATCTTTTGGATAAATGG
ATTTTTCAAAATCAACAAGGCTGATCTACTTGANTGGGGAGCTAAATTGANGATATCTCT
GATGNAGCNAANGGATTAACNTATNCTCACAGGACTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3109#0      TTCTACAATAGCCACTGCATCCTTCTGTTCAGAGGAAGCCAGGATGAGAATCCCAGCATC 60
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      ACGAAATGGAAACACCCCTATTACCACGTTGTCCGGTATTTCCATCTTCGTTTCCTTCCT 120
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      ACCATAGCAAGCAATTTGTCTAAAACTACCTGTCCTTTCATCCTTGGATTCTCACCACCA 180
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      ATGGTTTGTGTTCAGTGAATGATCTAACCATGCGTCATTCACAGTTCTTCGTTCTTGTCT 240
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TTACTCTCATGATTTTCTCTTTGTTCCAGACTTGCCAATCCAACCATGAGCATGTCGTTT 300
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GCTCTGAATGCTGAGCCAAACACTGTGTGGTATAATAACCGCTCCCTCCTCCAGAATACA 360
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TTTTCAGATGACAATTTCTTGATGCGCATCTTCCTCCCTCATGACATTGCAGTTCCAAGT 420
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      ATAAATGATAGCATCGTTCCTTCATTTGCTTGCGGGTTCTTCTGTGCAGGATCTGCAACC 480
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      AGCTGTGATGCCTACATTTTTTCCATCTTCTTTGTCTATGTTAGCACCGATTTCAGTCAG 540
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      CGGCTGCGGTGGCCCGAGATAGTCTGGTTTGCCAACCGTGATCATCCAGTTGGAGAGAAT 600
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GCTACTGTTCAATTTACTGAACTTGGGGATTTAGTGCTCTATGATGCAGATGGAACACTT 660
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GTTTGGTCCACCAATACAGCGAACAAGTCTGTTGTCAGCATGAACCTTACAGGGTCAGGA 720
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      AATCTGGTATTGTTAGACCGCACAAATGTGGAGGTCTGGAGATCCTTCGATCACCCAACT 780
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GACACGCTTGTCATTTCTCAGACACTACAGATGGGTCAGAAGCTTGTGGCAAGAACTTCG 840
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TCGACAAACTGGACTGAGGGAAAATTGTACCTCACCGAGTCACCGTCCTCGCTGATGGCA 900
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TGTATGCATTTGCATTGCATACTACCGGAGCCCCACTGGTGGAACTGTTGCAACAAACAT 960
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GTCAGCTTACGTTGCACTCAAGAATGGTAGCCTTGAGGTGTTCACTTCTTTCCAGGAGAC 1020
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      AAAGGCGCCTGATTACCACATCCAGCTGCCTGAGAATTCCTTTGGGCTGGAGTTTGCAAG 1080
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GCTAGATTGGGATGGGCACATGAGACTATATCAGTGGATCAATTACAGTGCCTGGGTGCC 1140
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TTCAGATATTTTTGACATAACTGACCCTTGTGCTTATCCTCTAGCTTGTGGAGAGTATGG 1200
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TATTTGCTCGCATGGACAGTGCAGCTGCCCAGATGTAGCCATTGGGCAATCAGGATTGTT 1260
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TGAGCTGGTCGATGCCAAGGGAGTTAACCATGGCTGCTTTCTGACGTCTTCATTGACTTG 1320
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TGGGTCAGCCAGGAAGACTAGGTTTCTTGCTGTTCCCAATGTCACCCACTTCAATTTTGT 1380
consensus_3109#1      ----------------ACCNGGNTNCTTGCTGTTCCCAACATCACATACTTCAATTTTGT 44
                                      **  ** * **************  ****  *************

consensus_3109#0      CTACAATTGGACAACAAATGAAGATCATTGCAAACTATCATGCATGGATGATTGTTCTTG 1440
consensus_3109#1      CTACAATTGGNCAACAAATGAAGATCACTGCAAACTATCATGCATGGNTGATTGTTCTTG 104
                      ********** **************** ******************* ************

consensus_3109#0      TCGGGCTTCATTTTTCCAGCATAAGGACATTTCTTCTGGTTTCTGTTTTCTTGCATTCAA 1500
consensus_3109#1      CCGGGCTTCATTTTTCCAATATGAGGATACTTCTTCTGGNTTCTGTTTTCTTGCNTCNGN 164
                       *****************  ** **** * ********* ************** *    

consensus_3109#0      CATATTTTCGATGATAAATTTTAGTGCACAAAGTTATTCAAGTAACTTTAGTTCTTCTGC 1560
consensus_3109#1      NGTATTTTTGATG----------------------------------------------- 177
                        ****** ****                                               

consensus_3109#0      TTTTCTCAAAATTCAGGACTCTACCCACAAATCCTTATTATCTAAAGAGAAAAGAGCAAT 1620
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      CGTTTTGGTTGCTGGTTCTTTGAGTTTTGTTACTTCAGTTATTGTTGCAGTGCTTATAGT 1680
consensus_3109#1      ---------------------------------------------------GCTTATAGT 186
                                                                         *********

consensus_3109#0      TCTGAGAAGAAAGAGAGACAAACCATTAGAAGATGAATATTTTATTGATCAGCTTCCAGG 1740
consensus_3109#1      TCTGAGAAGAAAGAGAGATGAACCGTTAGAAGATGAATATTTTATTGATCAGCTTCCAGG 246
                      ******************  **** ***********************************

consensus_3109#0      GCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAA 1800
consensus_3109#1      GCTACCCACAAGATTTTCTTTTGTGGATTTGAAATCAGCAACAGGAGATTTCTCAAGAAA 306
                      ************************************************************

consensus_3109#0      GATTGGGGCAGGGGGATTTGGTTCTGTTTTTGAAGGACAGATCGGTGATAAGCATGTTGC 1860
consensus_3109#1      GATTGGGGCAGGGGGATTTGGTTCTATTTTTGAAGGACAGATCGGTGATAAGCATGTTGC 366
                      ************************* **********************************

consensus_3109#0      TGTCAAGAGATTGGATAGCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGTTCAGAC 1920
consensus_3109#1      TGTCNAGAGATTGGACATCATAGGTCAGGGGAAAAGAGAATTCTTAGCAGAGGGTCAGAC 426
                      **** ********** * *********************************** ******

consensus_3109#0      AATTGGAAGCATTAACCACATACACCTGGTGAGGCTAATCGGATTTTGTGTTGAAAAAA- 1979
consensus_3109#1      CATTGGAAGCATTAACCACATACACCTGGNGAGGCTAATCGGATTTTGGGGTGAAAAAAA 486
                       **************************** ****************** * ******** 

consensus_3109#0      CTCATAGGCTTCTTGTCTATGAGTACATGCCTAATGGATCTTT-GGATAAATGGATTTTT 2038
consensus_3109#1      CTCACAGGCTTCTTGNCTATCAGGACATGACTAATGGATCTTTTGGATAAATGGATTTTT 546
                      **** ********** **** ** ***** ************* ****************

consensus_3109#0      CAGAATCACCAAG-CTGATCCACTTGATTGGAAAACCAGATTGAAGATTATCTCTGATGT 2097
consensus_3109#1      CAAAATCAACAAGGCTGATCTACTTGANTGGGGAGCTAAATTGANGAT-ATCTCTGATGN 605
                      ** ***** **** ****** ****** ***  * * * ***** *** ********** 

consensus_3109#0      AGCCAAGGCATTAGCTTATCTTCATAGTGATTGCCGACAAACAATAGCTCATCTGGACAT 2157
consensus_3109#1      AGCNAANGGATTAACNTATNCTCACAG-GACTG--------------------------- 637
                      *** ** * **** * ***  *** ** ** **                           

consensus_3109#0      CAAGCCAGAAAATATACTTTTGGATGAGGTGTTCACTGCAAAGATATCTGACTTTGGACT 2217
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TGCCAAACTGATTGACCGTGAGCAAAGCAGTGTCATGACTAGATTAAGAGGCAGACTGGG 2277
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TTACTTAGCCCCTGAGTGGTTGACATCTGTGATCACTGAAAAGGTTGATGTGTATAGCTT 2337
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TGGCGTTGTGATAATGGAAATTTTATGCAGCAGAAGGAATTTGGACTACTCGCAGCCTGA 2397
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      AGAAAGCTGCCATCTCATCAGCATGTTGCAGGAGAAGGCCAAAAATAACCAGTTGATGGA 2457
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      CCTTATCGATCCATGTTTCTTTGATATGGAATTACATATGGATGATGTTTTATGAATGAT 2517
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GAATTTAGCAATGTGGTGCTTGCAAGTCGATAACAATAGAAGGCCTTCCATGTCCATGGT 2577
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      GGTCAAAATCCTGGAAGGTACCATGGATGTTGAAACTGAACTTGATTTTGACCTGGTAAA 2637
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      CATAGACCCGATGGTAGTAGCACATCGAGCAGCTCAAAGGAACAGTATTACTTTGCAGGT 2697
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      AGACTCTGTCCTTTCAGGGCCAAGATGAAATACAAGGAGCTCAAATATATTCTTCAAAGA 2757
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      TATCAAGCTCAAGATTGAAAACACGTACTCCTGTTTTCCTATACTATGGCATTTAGATAA 2817
consensus_3109#1      ------------------------------------------------------------
                                                                                  

consensus_3109#0      ACAAAGATGTAGACATGTAGTGATGTACTATAGTGATAATGATTTT 2863
consensus_3109#1      ----------------------------------------------