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Oryza sativa
cluster # 315 cluster # 315       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_315#0 length = 2121 sequences # 1  
consensus_315#1 length = 1878 sequences # 1  

consensusID : consensus_315#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2121
fasta sequence
                              [GGACTCGGAGCCGCGGGGTTGGTCCATTCGCAGAGCTCAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGCCTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTTAGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCAGAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCTATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGACAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCATAGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTAGGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAATAGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATTCTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGTGGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGGCTGAGATTTCTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGACAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCTTGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTCAATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAACAAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTAACACAGAACTTATCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTGAGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTTGGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGCTTGCATACGGCTTCAGGTAATTCTTCAAGGCGTGACCATCTGAGGTCTAGGTAACGCAAATGTATGAAGTTACTAACTGCTGCAAGTTGCTCTTTTCGGAAAGTGCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGAGCAACTGAGTAACTCGTTAAGGTACTCCTTTCCTACATCTTCCAATGTCTGATCCTCTCCAGGTGTTGGAACAAGGCCTTGTGCCATCCAAGCAAATATAAGCTCTTGCTCAGTGAACTTATAGCCTCTTGGAAATATGGCACAATAGGTGAAACATCGCTGCAAGCTTAGAGGGAGATGCTGATAACTCAACAACAAAACCGGCATAACGTCGTCAGGCTCTTGTTTTAGTTCCCATATGTTTCTATTCAGAAACTTGCACCAATGCTCCTCCTCGTGGTTTTCCGAAAGGAATCTCCCCATGGTCTTGGCAGCCAAGGGGTTGCCATACAACTTGAGAGCTATTTTCCTGCCTATTCGAGCCAAGCTGTGGTCCTCTGTGATGTTTGTGCACTGTAGGAAGAAAGCCCAAAATTCATTATCATGTAAACC]

[+] EMBL AK064023             [GGACTCGGAGCCGCGGGGTTGGTCCATTCGCAGAGCTCAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGCCTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTTAGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCAGAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCTATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGACAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCATAGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTAGGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAATAGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATTCTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGTGGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGGCTGAGATTTCTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGACAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCTTGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTCAATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAACAAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTAACACAGAACTTATCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTGAGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTTGGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGCTTGCATACGGCTTCAGGTAATTCTTCAAGGCGTGACCATCTGAGGTCTAGGTAACGCAAATGTATGAAGTTACTAACTGCTGCAAGTTGCTCTTTTCGGAAAGTGCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGAGCAACTGAGTAACTCGTTAAGGTACTCCTTTCCTACATCTTCCAATGTCTGATCCTCTCCAGGTGTTGGAACAAGGCCTTGTGCCATCCAAGCAAATATAAGCTCTTGCTCAGTGAACTTATAGCCTCTTGGAAATATGGCACAATAGGTGAAACATCGCTGCAAGCTTAGAGGGAGATGCTGATAACTCAACAACAAAACCGGCATAACGTCGTCAGGCTCTTGTTTTAGTTCCCATATGTTTCTATTCAGAAACTTGCACCAATGCTCCTCCTCGTGGTTTTCCGAAAGGAATCTCCCCATGGTCTTGGCAGCCAAGGGGTTGCCATACAACTTGAGAGCTATTTTCCTGCCTATTCGAGCCAAGCTGTGGTCCTCTGTGATGTTTGTGCACTGTAGGAAGAAAGCCCAAAATTCATTATCATGTAAACC]


>consensus_315#0 GGACTCGGAGCCGCGGGGTTGGTCCATTCGCAGAGCTCAGCGGTGGAATTAGCTCGAAGC TCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGCCTCCTACCTCCCGGATTTCCTCC TTCCCCAGGGCTTTCTCCACCGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAA ACTAGACACATGTTTTAGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGT ATTAGCATTGATTTCAGAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCC CCAAATTTGAATGTCTATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGA CAGCACCAATTCAGGACAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTT GTTTTCTCTACTCCATAGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGT CAAACTGGTCAGGCTAGGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGG CATTGTTTTGATAAATAGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATA GAACTCAGAGCCAATTCTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTG AGGGAGGAGTCCCAGTGGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATA TTCTAGTGAGCTAAGGCTGAGATTTCTAGCAAGCCATGATGGGGTAGTACTGCCCCTATA GCCTGTAATATGGAGACAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTA TTGTTCTGAAGGCTCTTGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAG GTGCCTTTTGTCACTCAATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAG ATTCTGAACTTTCAACAAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAA GCCCCTGGTTTTCCTAACACAGAACTTATCCAACAGAAGCAAGGAAGTCATATTGCCAAC ACATGGAACTCCTGTGAGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAA TAAGTTGGCTATCCTTGGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAAC TTGTAGTAGGTAAAGCTTGCATACGGCTTCAGGTAATTCTTCAAGGCGTGACCATCTGAG GTCTAGGTAACGCAAATGTATGAAGTTACTAACTGCTGCAAGTTGCTCTTTTCGGAAAGT GCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTC AGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAG ATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACA ATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTG ACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAAC AAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATG GAAGAATGAGCAACTGAGTAACTCGTTAAGGTACTCCTTTCCTACATCTTCCAATGTCTG ATCCTCTCCAGGTGTTGGAACAAGGCCTTGTGCCATCCAAGCAAATATAAGCTCTTGCTC AGTGAACTTATAGCCTCTTGGAAATATGGCACAATAGGTGAAACATCGCTGCAAGCTTAG AGGGAGATGCTGATAACTCAACAACAAAACCGGCATAACGTCGTCAGGCTCTTGTTTTAG TTCCCATATGTTTCTATTCAGAAACTTGCACCAATGCTCCTCCTCGTGGTTTTCCGAAAG GAATCTCCCCATGGTCTTGGCAGCCAAGGGGTTGCCATACAACTTGAGAGCTATTTTCCT GCCTATTCGAGCCAAGCTGTGGTCCTCTGTGATGTTTGTGCACTGTAGGAAGAAAGCCCA AAATTCATTATCATGTAAACC



consensusID : consensus_315#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1878
fasta sequence
                              [CAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGCCTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGCCTCTGATGATCAATTTTTCAAGCTTTTCCGGCAGCCCATTATTTGGCAATGACTCAACACATGGGCATGAATCAATCTCGAGCTGCTTGAGAGTGTATATTTTGTGCAGTTCACTGGGAAGAGAATGTAGATTGCAGCATTGTATAAACCCAAGATCTTGCAGAGAGGTTAAGAGTAGAAGTGCCTGCACCTGTTGTCTTGAGAGGGAAGTGACCCTGAAATCCGAATGAATTGTTAGCTTCTTCAGAGAAGTGAGCACTGCACACAAAGGGGAGTTGAGGAATAAGGTGCTGTCAACTGTAAGAGATTCCAGTGAGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTTAGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCAGAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCTATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGACAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCATAGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTAGGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAATAGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATTCTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGTGGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGGCTGAGATTACTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGACAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCTTGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTCAATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAACAAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTAACACAGAACTTGTCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTGAGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTTGGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGCTTGCATACGGCTTCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGA]

[+] EMBL AK121707             [CAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGCCTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGCCTCTGATGATCAATTTTTCAAGCTTTTCCGGCAGCCCATTATTTGGCAATGACTCAACACATGGGCATGAATCAATCTCGAGCTGCTTGAGAGTGTATATTTTGTGCAGTTCACTGGGAAGAGAATGTAGATTGCAGCATTGTATAAACCCAAGATCTTGCAGAGAGGTTAAGAGTAGAAGTGCCTGCACCTGTTGTCTTGAGAGGGAAGTGACCCTGAAATCCGAATGAATTGTTAGCTTCTTCAGAGAAGTGAGCACTGCACACAAAGGGGAGTTGAGGAATAAGGTGCTGTCAACTGTAAGAGATTCCAGTGAGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTTAGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCAGAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCTATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGACAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCATAGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTAGGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAATAGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATTCTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGTGGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGGCTGAGATTACTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGACAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCTTGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTCAATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAACAAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTAACACAGAACTTGTCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTGAGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTTGGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGCTTGCATACGGCTTCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGA]


>consensus_315#1 CAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGC CTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGCCTCTGATGATCAAT TTTTCAAGCTTTTCCGGCAGCCCATTATTTGGCAATGACTCAACACATGGGCATGAATCA ATCTCGAGCTGCTTGAGAGTGTATATTTTGTGCAGTTCACTGGGAAGAGAATGTAGATTG CAGCATTGTATAAACCCAAGATCTTGCAGAGAGGTTAAGAGTAGAAGTGCCTGCACCTGT TGTCTTGAGAGGGAAGTGACCCTGAAATCCGAATGAATTGTTAGCTTCTTCAGAGAAGTG AGCACTGCACACAAAGGGGAGTTGAGGAATAAGGTGCTGTCAACTGTAAGAGATTCCAGT GAGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTTAGC CAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCAGAA ACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCTATA TCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGACAG TATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCATAGA AAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTAGGG AAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAATAGC CCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATTCTT CTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGTGGA GGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGGCTG AGATTACTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGACAA CTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCTTGT ACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTCAAT CTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAACAAA CCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTAACA CAGAACTTGTCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTGAGT AAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTTGGA GGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGCTTG CATACGGCTTCAGGGCAGAGACAACAGTCTGATAGTACTAGGCCAATTGCTCTGGACAAA GACTACCTCAGAACCTGGAGACCAAATTGATGAAGAGGCAGAGAACATTATAGTCCGCAA ATTTTTTAGATGCAGCAAGCCAGCCCATGAGTTCTTTTGGATGCGGCGTTTCATCTGAAT ACCAGAACAATCGAGTGGATGACATAAGCCCATATCACGAGCATGATCAGAATGAGAGAT ATACAAGTGACAAGCCTCAACTGAGATAGGGAATTTACCATTAGTTGCCTGGAATTCCCC TTCTGCAACAAGTTGAGCAAGATCATGTAACAACCCAGGTATCATGTAGTGGCCACTCTC GATTATATGGAAGAATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_315#0      ------------------------------------------------------------
consensus_315#1      CAGCGGTGGAATTAGCTCGAAGCTCGATCATGGCCGCCGCCGCCGGGCTTGCCGCGCCGC 60
                                                                                 

consensus_315#0      ------------------------------------------------------------
consensus_315#1      CTCCTACCTCCCGGATTTCCTCCTTCCCCAGGGCTTTCTCCACCGCCTCTGATGATCAAT 120
                                                                                 

consensus_315#0      ------------------------------------------------------------
consensus_315#1      TTTTCAAGCTTTTCCGGCAGCCCATTATTTGGCAATGACTCAACACATGGGCATGAATCA 180
                                                                                 

consensus_315#0      ------------------------------------------------------------
consensus_315#1      ATCTCGAGCTGCTTGAGAGTGTATATTTTGTGCAGTTCACTGGGAAGAGAATGTAGATTG 240
                                                                                 

consensus_315#0      -------------------------------GGACTCGGAGCCGCGGGGTTGGTCCATTC 29
consensus_315#1      CAGCATTGTATAAACCCAAGATCTTGCAGAGAGGTTAAGAGTAGAAGTGCCTG--CACCT 298
                                                     *  *  ***  *  * *   *  **   

consensus_315#0      GCAGAGCTCAGCGGTGGAATTAGCTCGAAGCTCGATCA---TGGCCGCCGCCGCCGGGCT 86
consensus_315#1      GTTGTCTTGAGAGG-GAAGTGACCCTGAAATCCGAATGAATTGTTAGCTTCTTCAGAGAA 357
                     *  *   * ** ** * * * * *  ***   ***      **   **  *  * * *  

consensus_315#0      TGCCGCGCCGCCTCCTAC------CTCCCGGAT----TTCCTCCTTCCCCAGGGCTTTCT 136
consensus_315#1      GTGAGCACTGCACACAAAGGGGAGTTGAGGAATAAGGTGCTGTCAACTGTAAGAGATTCC 417
                         ** * **   * *        *   * **    * *   *  *   * *   *** 

consensus_315#0      CCACCGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTT 196
consensus_315#1      AGTGAGGGGTGTACAGAAAGACTGTCCTGTGCCCAAATATGAAAACTAGACACATGTTTT 477
                          *******************************************************

consensus_315#0      AGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCA 256
consensus_315#1      AGCCAATGCAATTGTAGAACAGCATTTATTGGGCCTGAGCTAGTATTAGCATTGATTTCA 537
                     ************************************************************

consensus_315#0      GAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCT 316
consensus_315#1      GAAACCTCAAGACAGCCACCACGCAAATTTATCACTGTTTGTCCCCAAATTTGAATGTCT 597
                     ************************************************************

consensus_315#0      ATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGA 376
consensus_315#1      ATATCAAGGAGCCAAGGCAAGCGTGGAATAAGGAGGGCTTCTGACAGCACCAATTCAGGA 657
                     ************************************************************

consensus_315#0      CAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCAT 436
consensus_315#1      CAGTATTTGATGTTGATTTTACCAAGCTTTGGGAACCAACACTTGTTTTCTCTACTCCAT 717
                     ************************************************************

consensus_315#0      AGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTA 496
consensus_315#1      AGAAAACTAGGAATTCTACTCAGCTTGGGACAATCTTCTACAGTCAAACTGGTCAGGCTA 777
                     ************************************************************

consensus_315#0      GGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAAT 556
consensus_315#1      GGGAAAACATTGGAGTCATCTACATTCCAGTCTTCCAATTCTGGCATTGTTTTGATAAAT 837
                     ************************************************************

consensus_315#0      AGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATT 616
consensus_315#1      AGCCCTTCCAAACATGGAAACCCCACCACCTGACCACTGCTATAGAACTCAGAGCCAATT 897
                     ************************************************************

consensus_315#0      CTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGT 676
consensus_315#1      CTTCTTAGCGCGTGCATATTGACTATATGCAGCTTCCTAAGGTGAGGGAGGAGTCCCAGT 957
                     ************************************************************

consensus_315#0      GGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGG 736
consensus_315#1      GGAGGAAGAATTTCCAATTCAGAACAATAATCTAGATAAAGATATTCTAGTGAGCTAAGG 1017
                     ************************************************************

consensus_315#0      CTGAGATTTCTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGA 796
consensus_315#1      CTGAGATTACTAGCAAGCCATGATGGGGTAGTACTGCCCCTATAGCCTGTAATATGGAGA 1077
                     ******** ***************************************************

consensus_315#0      CAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCT 856
consensus_315#1      CAACTTACATTTGAATGTGGTGCAAGACCTTCCAGGACGTGGTATTGTTCTGAAGGCTCT 1137
                     ************************************************************

consensus_315#0      TGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTC 916
consensus_315#1      TGTACACAAGAACCGGCACTCCATGACAGCCACAGCTCAGTTAGGTGCCTTTTGTCACTC 1197
                     ************************************************************

consensus_315#0      AATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAAC 976
consensus_315#1      AATCTAGCCTTTGCTGCTTCTTCATTGCCATCAACATTCTCGAGATTCTGAACTTTCAAC 1257
                     ************************************************************

consensus_315#0      AAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTA 1036
consensus_315#1      AAACCTCTTAGGTTCCTCAACCTTTTCAGTTGTCCAATGTCAAAGCCCCTGGTTTTCCTA 1317
                     ************************************************************

consensus_315#0      ACACAGAACTTATCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTG 1096
consensus_315#1      ACACAGAACTTGTCCAACAGAAGCAAGGAAGTCATATTGCCAACACATGGAACTCCTGTG 1377
                     *********** ************************************************

consensus_315#0      AGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTT 1156
consensus_315#1      AGTAAATGTTTTCCTTCATCAGCAATCAGATGCTCAAAGTTTAATAAGTTGGCTATCCTT 1437
                     ************************************************************

consensus_315#0      GGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGC 1216
consensus_315#1      GGAGGTAAATGAAGAAGGCACGGACAGTGCTTTATGTTCAAAACTTGTAGTAGGTAAAGC 1497
                     ************************************************************

consensus_315#0      TTGCATACGGCTTCAGGTAATTCTTCAAGGCGTGACCATCTGAGGTCTAGGTAACGCAAA 1276
consensus_315#1      TTGCATACGGCTTCAGG------------------------------------------- 1514
                     *****************                                           

consensus_315#0      TGTATGAAGTTACTAACTGCTGCAAGTTGCTCTTTTCGGAAAGTGCAGGGCAGAGACAAC 1336
consensus_315#1      -------------------------------------------------GCAGAGACAAC 1525
                                                                      ***********

consensus_315#0      AGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAA 1396
consensus_315#1      AGTCTGATAGTACTAGGCCAATTGCTCTGGACAAAGACTACCTCAGAACCTGGAGACCAA 1585
                     ************************************************************

consensus_315#0      ATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCC 1456
consensus_315#1      ATTGATGAAGAGGCAGAGAACATTATAGTCCGCAAATTTTTTAGATGCAGCAAGCCAGCC 1645
                     ************************************************************

consensus_315#0      CATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACAT 1516
consensus_315#1      CATGAGTTCTTTTGGATGCGGCGTTTCATCTGAATACCAGAACAATCGAGTGGATGACAT 1705
                     ************************************************************

consensus_315#0      AAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAG 1576
consensus_315#1      AAGCCCATATCACGAGCATGATCAGAATGAGAGATATACAAGTGACAAGCCTCAACTGAG 1765
                     ************************************************************

consensus_315#0      ATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCA 1636
consensus_315#1      ATAGGGAATTTACCATTAGTTGCCTGGAATTCCCCTTCTGCAACAAGTTGAGCAAGATCA 1825
                     ************************************************************

consensus_315#0      TGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGAGCAACTG 1696
consensus_315#1      TGTAACAACCCAGGTATCATGTAGTGGCCACTCTCGATTATATGGAAGAATGA------- 1878
                     *****************************************************       

consensus_315#0      AGTAACTCGTTAAGGTACTCCTTTCCTACATCTTCCAATGTCTGATCCTCTCCAGGTGTT 1756
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      GGAACAAGGCCTTGTGCCATCCAAGCAAATATAAGCTCTTGCTCAGTGAACTTATAGCCT 1816
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      CTTGGAAATATGGCACAATAGGTGAAACATCGCTGCAAGCTTAGAGGGAGATGCTGATAA 1876
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      CTCAACAACAAAACCGGCATAACGTCGTCAGGCTCTTGTTTTAGTTCCCATATGTTTCTA 1936
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      TTCAGAAACTTGCACCAATGCTCCTCCTCGTGGTTTTCCGAAAGGAATCTCCCCATGGTC 1996
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      TTGGCAGCCAAGGGGTTGCCATACAACTTGAGAGCTATTTTCCTGCCTATTCGAGCCAAG 2056
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      CTGTGGTCCTCTGTGATGTTTGTGCACTGTAGGAAGAAAGCCCAAAATTCATTATCATGT 2116
consensus_315#1      ------------------------------------------------------------
                                                                                 

consensus_315#0      AAACC 2121
consensus_315#1      -----
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)