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Oryza sativa
cluster # 3165 cluster # 3165       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3165#0 length = 1943 sequences # 2  
consensusID : consensus_3165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1943
fasta sequence 
                              [CCCAAATCCCAATCGCGCTCCCTCGCCCGTCGCCCGTCGCCGCGCCTTCCTCTACCCCGTACCACCGCCGAAACCCTAGACCCTCGTCGCATCCGTCCTCGGCGGCTAGATCGGCGCACGCATTCATCTCCGGCCCGGCTGACGCTTCTTCCCTGGCTCGATTCGCGACCCAGTTGGGCCGATTTGGATCAGCAGCGGCCCGGCCCTCTTCTTAGCCCAATTCCAACAAACCCCCACTCGCCGCCAGCCTCGTCGGCCGCCAGCGGCGGAGCTCTCCCCCCTCCGGATACTCTTTCGAGCTTTCTTGGTGAATACAATCTTGTTTCTAGTCATGGCGAAGCAGGCCTACGCGACGAGCAGCCTCGTGATAGGATATGCACTCTGCTCGAGCTTGCTCGCGATCATCAACAAGTATGCCATCACCAAGTTCAGCTACCCTGGCCTCCTCACTGCCCTGCAGTACTTGACATCAGTGGCTGGTGTCTGGACCCTCGGAAAGCTCGGACTCCTCTACCATGATCCCTTCAACCTCCAGACCGCAAAGAAGTTTGCGCCGGCTGCACTTGTGTTCTACCTTGCCATCTTCACCAACACCCATCTCCTGAAGCATGCCAATGTGGATACCTTCATAGTGTTCAGATCGTTGACCCCGCTTTTGGTCGCCATCGCTGATACTGCCTTCAGGAAGCAGCCATGTCCTTCCAAGCTCACATTTGTGTCCCTTGTCACTATTTTGGGAGGCGCTGTTGGTTACGTGATGACAGATTCGGGGTTCAGCCTCACAGCCTACTCATGGGCAGTCGCTTATCTGGTGACTATAACAACTGAGATGGTGTACATCAAGCACATGGTTACAAAGTTGGGCCTGAATACATGGGGTTTCGTGCTCTACAACAATCTTCTCTCGCTGATAATTGCTCCTGTATTTTGGTTTTTGACTGGAGAGCACTTGTCAGTCTTCAGAGCCATTGAATCAAGGGGCCAGAGTTGGTTTGAACTTGATGCCTTTGTGGCAGTTTCCTTGTCCTGTGTGTTTGGGCTGCTCATTAGCTTCTTTGGTTTCGCAGCAAGGAAAGCAATCTCCGCCACGGCTTTTACAGTAACAGGTGTTGTCAACAAGTTTCTCACAGTTGCAATCAATGTTATGATCTGGGATAAGCATGCGAGTTCATTTGGTCTGGTTTGCTTGCTCTTCACTCTGGCTGGCGGGGTACTCTATCAGCAATCAGTTACATTAAAAGGGAATTCTTCAGTGCAGCGTGAGGCTGTAGCTAAGCAAGGGAAGGCTGATAATGATACAGCTGAGTTAGATGAGGAGAAGCAAAGCTTGGTATCATCTCCAAAGGACTCTAATGTCTGAAGGCTGAACTACAATATTTCCAGCATATATGCAGTTTTGTTCTTTTGTTTGGATATGCATCGGATGCTTCAAGATTATCATAATCATATCCCATAGGAAATTCAAGAGGTAGTATTGTTGTTGTAGCATGGTACCTGCACTCACATTACAGTTACACTTTTACTTCAAAACTTAGATGTGTTCATGTTCCCTGTTGTTCTCTAAATTACTCATGTGGTTTTTATAGGATAACATGTTTTCTTCATGAAAGTGTCATACCTTTTTCTGTTTTTCTAGGTGTTCTATTGCTTATGGGATAGCTTAGTGCTCCCTCATCAACATACAGCTGTAATGGTTAATCATTTCCATCTTAGAAAAATCTCAAGCTAATAGAAGAGTGAGTTAGGTACTTAGGTTTATGGTATTACTTTGAAAACGCAAACATGAATACAACATTAGCTTGTCAATGATAATGCAAGAAGACACCATCTCCTTTCTGACATTGTATACCTATTGGAGTGATGATGCTTTTCGGACAATTTTAATTGTTCAGCACTACTTTGTATGGTTATATACTGTTTCAAAGTTCAAATGCCAATGATCT]

[+] EMBL AK101564             [CCCAAATCCCAATCGCGCTCCCTCGCCCGTCGCCCGTCGCCGCGCCTTCCTCTACCCCGTACCACCGCCGAAACCCTAGACCCTCGTCGCATCCGTCCTCGGCGGCTAGATCGGCGCACGCATTCATCTCCGGCCCGGCTGACGCTTCTTCCCTGGCTCGATTCGCGACCCAGTTGGGCCGATTTGGATCAGCAGCGGCCCGGCCCTCTTCTTAGCCCAATTCCAACAAACCCCCACTCGCCGCCAGCCTCGTCGGCCGCCAGCGGCGGAGCTCTCCCCCCTCCGGATACTCTTTCGAGCTTTCTTGGTGAATACAATCTTGTTTCTAGTCATGGCGAAGCAGGCCTACGCGACGAGCAGCCTCGTGATAGGATATGCACTCTGCTCGAGCTTGCTCGCGATCATCAACAAGTATGCCATCACCAAGTTCAGCTACCCTGGCCTCCTCACTGCCCTGCAGTACTTGACATCAGTGGCTGGTGTCTGGACCCTCGGAAAGCTCGGACTCCTCTACCATGATCCCTTCAACCTCCAGACCGCAAAGAAGTTTGCGCCGGCTGCACTTGTGTTCTACCTTGCCATCTTCACCAACACCCATCTCCTGAAGCATGCCAATGTGGATACCTTCATAGTGTTCAGATCGTTGACCCCGCTTTTGGTCGCCATCGCTGATACTGCCTTCAGGAAGCAGCCATGTCCTTCCAAGCTCACATTTGTGTCCCTTGTCACTATTTTGGGAGGCGCTGTTGGTTACGTGATGACAGATTCGGGGTTCAGCCTCACAGCCTACTCATGGGCAGTCGCTTATCTGGTGACTATAACAACTGAGATGGTGTACATCAAGCACATGGTTACAAAGTTGGGCCTGAATACATGGGGTTTCGTGCTCTACAACAATCTTCTCTCGCTGATAATTGCTCCTGTATTTTGGTTTTTGACTGGAGAGCACTTGTCAGTCTTCAGAGCCATTGAATCAAGGGGCCAGAGTTGGTTTGAACTTGATGCCTTTGTGGCAGTTTCCTTGTCCTGTGTGTTTGGGCTGCTCATTAGCTTCTTTGGTTTCGCAGCAAGGAAAGCAATCTCCGCCACGGCTTTTACAGTAACAGGTGTTGTCAACAAGTTTCTCACAGTTGCAATCAATGTTATGATCTGGGATAAGCATGCGAGTTCATTTGGTCTGGTTTGCTTGCTCTTCACTCTGGCTGGCGGGGTACTCTATCAGCAATCAGTTACATTAAAAGGGAATTCTTCAGTGCAGCGTGAGGCTGTAGCTAAGCAAGGGAAGGCTGATAATGATACAGCTGAGTTAGATGAGGAGAAGCAAAGCTTGGTATCATCTCCAAAGGACTCTAATGTCTGAAGGCTGAACTACAATATTTCCAGCATATATGCAGTTTTGTTCTTTTGTTTGGATATGCATCGGATGCTTCAAGATTATCATAATCATATCCCATAGGAAATTCAAGAGGTAGTATTGTTGTTGTAGCATGGTACCTGCACTCACATTACAGTTACACTTTTACTTCAAAACTTAGATGTGTTCATGTTCCCTGTTGTTCTCTAAATTACTCATGTGGTTTTTATAGGATAACATGTTTTCTTCATGAAAGTGTCATACCTTTTTCTGTTTTTCTAGGTGTTCTATTGCTTATGGGATAGCTTAGTGCTCCCTCATCAACATACAGCTGTAATGGTTAATCATTTCCATCTTAGAAAAATCTCAAGCTAATAGAAGAGTGAGTTAGGTACTTAGGTTTATGGTATTACTTTGAAAACGCAAACATGAATACAACATTAGCTTGTCAATGATAATGCAAGAAGACACCATCTCCTTTCTGACATTGTATACCTATTGGAGTGATGATGCTTTTCGGACAATTTTAATTGTTCAGCACTACTTTGTATGGTTATATACTGTTTCAAAGTTCAAATGCCAATGATCT]
[+] EMBL BI804994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCTGAACTACAATATTTCCAGCATATAT CAGTTTTGTTCTTTTGTTTGGATATGCATCGGATGCTTCAAGATTATCATAATCATATCCCATAGGAAATTCAAGAGGTAGTATTGTTGTTGTAGCATGGTACCTGCACTCACATTACAGTTACACTTTTACTTC AAACTTAGATGTGTTCATGTTCCCTGTTGTTCTCTAAATTACTCATGTGGTTTTTATAGGATAACATGTTTTCTTCATGAAAGTGTCATACCTATTTCTGTTTTTCTAGGTGTTCTATTGCTTATGGGATAGCTTAGTGCTCCCTCATCAACATACAGCTGTAATGGTTAATCATTTCCATCTTAGAAAAATCTCAAGCTAATAGAAGAGTGAGTTAGGTACTTAGGTTTATGGTATTACTTTGAAAACGC AACATGAATACAACATTAGCTTGTCAAaaaaaaaa                                                                                                                                 ]




>consensus_3165#0
CCCAAATCCCAATCGCGCTCCCTCGCCCGTCGCCCGTCGCCGCGCCTTCCTCTACCCCGT
ACCACCGCCGAAACCCTAGACCCTCGTCGCATCCGTCCTCGGCGGCTAGATCGGCGCACG
CATTCATCTCCGGCCCGGCTGACGCTTCTTCCCTGGCTCGATTCGCGACCCAGTTGGGCC
GATTTGGATCAGCAGCGGCCCGGCCCTCTTCTTAGCCCAATTCCAACAAACCCCCACTCG
CCGCCAGCCTCGTCGGCCGCCAGCGGCGGAGCTCTCCCCCCTCCGGATACTCTTTCGAGC
TTTCTTGGTGAATACAATCTTGTTTCTAGTCATGGCGAAGCAGGCCTACGCGACGAGCAG
CCTCGTGATAGGATATGCACTCTGCTCGAGCTTGCTCGCGATCATCAACAAGTATGCCAT
CACCAAGTTCAGCTACCCTGGCCTCCTCACTGCCCTGCAGTACTTGACATCAGTGGCTGG
TGTCTGGACCCTCGGAAAGCTCGGACTCCTCTACCATGATCCCTTCAACCTCCAGACCGC
AAAGAAGTTTGCGCCGGCTGCACTTGTGTTCTACCTTGCCATCTTCACCAACACCCATCT
CCTGAAGCATGCCAATGTGGATACCTTCATAGTGTTCAGATCGTTGACCCCGCTTTTGGT
CGCCATCGCTGATACTGCCTTCAGGAAGCAGCCATGTCCTTCCAAGCTCACATTTGTGTC
CCTTGTCACTATTTTGGGAGGCGCTGTTGGTTACGTGATGACAGATTCGGGGTTCAGCCT
CACAGCCTACTCATGGGCAGTCGCTTATCTGGTGACTATAACAACTGAGATGGTGTACAT
CAAGCACATGGTTACAAAGTTGGGCCTGAATACATGGGGTTTCGTGCTCTACAACAATCT
TCTCTCGCTGATAATTGCTCCTGTATTTTGGTTTTTGACTGGAGAGCACTTGTCAGTCTT
CAGAGCCATTGAATCAAGGGGCCAGAGTTGGTTTGAACTTGATGCCTTTGTGGCAGTTTC
CTTGTCCTGTGTGTTTGGGCTGCTCATTAGCTTCTTTGGTTTCGCAGCAAGGAAAGCAAT
CTCCGCCACGGCTTTTACAGTAACAGGTGTTGTCAACAAGTTTCTCACAGTTGCAATCAA
TGTTATGATCTGGGATAAGCATGCGAGTTCATTTGGTCTGGTTTGCTTGCTCTTCACTCT
GGCTGGCGGGGTACTCTATCAGCAATCAGTTACATTAAAAGGGAATTCTTCAGTGCAGCG
TGAGGCTGTAGCTAAGCAAGGGAAGGCTGATAATGATACAGCTGAGTTAGATGAGGAGAA
GCAAAGCTTGGTATCATCTCCAAAGGACTCTAATGTCTGAAGGCTGAACTACAATATTTC
CAGCATATATGCAGTTTTGTTCTTTTGTTTGGATATGCATCGGATGCTTCAAGATTATCA
TAATCATATCCCATAGGAAATTCAAGAGGTAGTATTGTTGTTGTAGCATGGTACCTGCAC
TCACATTACAGTTACACTTTTACTTCAAAACTTAGATGTGTTCATGTTCCCTGTTGTTCT
CTAAATTACTCATGTGGTTTTTATAGGATAACATGTTTTCTTCATGAAAGTGTCATACCT
TTTTCTGTTTTTCTAGGTGTTCTATTGCTTATGGGATAGCTTAGTGCTCCCTCATCAACA
TACAGCTGTAATGGTTAATCATTTCCATCTTAGAAAAATCTCAAGCTAATAGAAGAGTGA
GTTAGGTACTTAGGTTTATGGTATTACTTTGAAAACGCAAACATGAATACAACATTAGCT
TGTCAATGATAATGCAAGAAGACACCATCTCCTTTCTGACATTGTATACCTATTGGAGTG
ATGATGCTTTTCGGACAATTTTAATTGTTCAGCACTACTTTGTATGGTTATATACTGTTT
CAAAGTTCAAATGCCAATGATCT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)