cluster # 3171

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Oryza sativa
cluster # 3171 cluster # 3171 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3171#0 length = 827 sequences # 2

consensusID : consensus_3171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 827
fasta sequence

                              [AGCTTTGAGCAGAATGCATTGGAAACTGCTAGTGAAGAAAAAGCATCCAAAATCAGAACAATTGCTCAGTGGAGACAAAGNTTGGTTACTAAATGCACTGAGATGCTTCCTGAGACTGAGAGGGAGGATATGAGAACCATTGGCAGTGCAGAGAGAAACCAATTTGCTGTACAAACTATGCAAAACTCTTCTCCAGCTAATCACATGGNCAAATCACCAAATCCTGTCATTGCATTTAGCCTATCGGCCACCCCTATTCCTCAGAAGAAGTCAAGCCCTTTCCAATCAAGAAATATCAATGTGTTGAATGATTCTGTTGGCCTTAACAGCAGTGCCCGTTCAGAGTTTGGCAGAAAGGTTCCATCTATCCTCCAATGCAGACCAGTTCCCCTGAGTTCACCTATATCCAATGTGAGATCAACTGCAGGGGATCTATTCCCCTCCATGGGACAGAATGGTGAAGGTCCATATTTAAAGGGGACTAAAGAACTCAGTTTTACGAAAGGAGAGTCTGGTTTTAAAAAGGGAACTAGACCTGCTGGTTATGATTCACTCCCTATGTATTTCAACATG-GGNTCTGGTGATACACCTATGAAGGAGTACCCGATCAAGTTTGNTGAAGACTGAGGGTAACAAAACCACTCCTTTTTAAGTAAAAAAATTCTGTCGGNAAGGGGGGAGNTTGACNTTCGGNTCACGTGCTGAGAAAACCTTT-ATCTTAAGTGGGACAGGTGCTGGTCAAAATGGGTCACTCAAAGATATNCGATAATGGCTGGNTTTCATGANGGTCACATNCAGGAAAACAAAGTACCTNCTAAGAGNAAAGG]

[+] EMBL CA765764             [AGCTTTGAGCAGAATGCATTGGAAACTGCTAGTGAAGAAAAAGCATCCAAAATCAGAACAATTGCTCAGTGGAGACAAAGNTTGGTTACTAAATGCACTGAGATGCTTCCTGAGACTGAGAGGGAGGATATGAGAACCATTGGCAGTGCAGAGAGAAACCAATTTGCTGTACAAACTATGCAAAACTCTTCTCCAGCTAATCACATGGNCAAATCACCAAATCCTGTCATTGCATTTAGCCTATCGGCCACCCCTATTCCTCAGAAGAAGTCAAGCCCTTTCCAATCAAGAAATATCAATGTGTTGAATGATTCTGTTGGCCTTAACAGCAGTGCCCGTTCAGAGTTTGGCAGAAAGGTTCCATCTATCCTCCAATGCAGACCAGTTCCCCTGAGTTCACCTATATCCAATGTGAGATCAACTGCAGGGGATCTATTCCCCTCCATGGGACAGAATGGTGAAGGTCCATATTTAAAGGGGACTAAAGAACTCAGTTTTACGAAAGGAGAGTCTGGTTTTAAAAAGGGAACTAGACCTGCTGGTTATGATTCACTCCCTATGTATTTCAACATG GGNTCTGGTGATACACCTATGAAGGAGTACCCGATCAAGTTTGNTGAAGACTGAGGGTAACAAAACCACTCCTTTTTAAGTAAAAAAATTCTGTCGGNAAGGGGGGAGNTTGACNTTCGGNTCACGTGCTGAGAAAACCTTT ATCTTAAGTGGGACAGGTGCTGGTCAAAATGGGTCACTCAAAGATATNCGATAATGGCTGGNTTTCATGANGGTCACATNCAGGAAAACAAAGTACCTNCTAAGAGNAAAGG]
[+] EMBL CF311492             [                                                                                                                                                                                                                 CAAATCACCAAATCCTGTCATTGCATTTAGCTTATCGGCCACCCCTATTCCTCAGAAGAAGTCAAGCCCTCTCCAATCAAGAAATATCAATGTGTTGAATGATTCTGTTGGCCTTAACAGCAGTGCCCGTTCAGAGTTTGGCAGAAAGGTTCCATCTATCCTCCAATGCAGGCCAGTTCCCCTGAGTTCACCTATATCCAATGTGAGATCAACTGCAGGGGGTCTATTCCCCTCCATGGGACAGAATGGTGAAGGTCCATATTTAAAGGGGACTAAAGAACTCAGTTTTACGAAAGGAGAGTCTGGTTTAAAAAAGGGAACTAGACCTGCTGGTTATGATTCACTCCCTATGTATTTCAACATGNGGTTCTGTTGATACACCTATGAAGGAGTA CCGATCAAGTTTGTTGAAGACTGAGGTTAACAAAACCACTCCTTTTCAAGT AAAAGATTCTGTCGG AAGGGGGGAGTTTGAC TTCGGTTCACGTGCTGAG AAACCTTTCATCTTA                                                                                                          ]




>consensus_3171#0
AGCTTTGAGCAGAATGCATTGGAAACTGCTAGTGAAGAAAAAGCATCCAAAATCAGAACA
ATTGCTCAGTGGAGACAAAGNTTGGTTACTAAATGCACTGAGATGCTTCCTGAGACTGAG
AGGGAGGATATGAGAACCATTGGCAGTGCAGAGAGAAACCAATTTGCTGTACAAACTATG
CAAAACTCTTCTCCAGCTAATCACATGGNCAAATCACCAAATCCTGTCATTGCATTTAGC
CTATCGGCCACCCCTATTCCTCAGAAGAAGTCAAGCCCTTTCCAATCAAGAAATATCAAT
GTGTTGAATGATTCTGTTGGCCTTAACAGCAGTGCCCGTTCAGAGTTTGGCAGAAAGGTT
CCATCTATCCTCCAATGCAGACCAGTTCCCCTGAGTTCACCTATATCCAATGTGAGATCA
ACTGCAGGGGATCTATTCCCCTCCATGGGACAGAATGGTGAAGGTCCATATTTAAAGGGG
ACTAAAGAACTCAGTTTTACGAAAGGAGAGTCTGGTTTTAAAAAGGGAACTAGACCTGCT
GGTTATGATTCACTCCCTATGTATTTCAACATGGGNTCTGGTGATACACCTATGAAGGAG
TACCCGATCAAGTTTGNTGAAGACTGAGGGTAACAAAACCACTCCTTTTTAAGTAAAAAA
ATTCTGTCGGNAAGGGGGGAGNTTGACNTTCGGNTCACGTGCTGAGAAAACCTTTATCTT
AAGTGGGACAGGTGCTGGTCAAAATGGGTCACTCAAAGATATNCGATAATGGCTGGNTTT
CATGANGGTCACATNCAGGAAAACAAAGTACCTNCTAAGAGNAAAGG

clustalw multiple alignements is not computed in this case