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Oryza sativa
cluster # 3173 cluster # 3173       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3173#0 length = 1021 sequences # 2  

consensusID : consensus_3173#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1021
fasta sequence
                              [AGCATCGCCGCGCGCCATCGCCCACCTGACTACCTGAGATCAGCTAAGCTAAGCTAAGCTTGCTTCCGCGCCATGGCGACCGTCGGGCCGTACGGCGAGGCCGAGAAGAACGAGCCGGCGAGGCCGCTCGCGCTCCCGTCGCCGTCCGTCCACCCGGCGGCCAACGACGACGAGGAGGCCGCCCGCGCGGCGGCGGCGGCGGCGGGGGACACCGCCGCCAACAAGCGCCCGCGCTCCCCGCAGTACCTCCGCAGGCGGCGCTGCGTGATCTGGTGCGGCGGCTGCTGCGTCACCTCGGCGGTCGTCGTCGGCATCGTCATCCTGGTGCTGGCGCTCACGGTGTTCAAGGTGAAGGACCCGGAGCTGACCATGAACCGCGTCACGCTGGAGGGCCTCGACGGCGACCTCGGCACGTCGAGGCACCCGGTGTCCGTGAACGCCACGCTCAACGCCGACGTCTCCCTCCGGAACCCCAACGTGGCGTCGTTCCGGTTCGACCGCAGCGAGACGGACTTCTACTACGCCGGGGAGACCGTCGGCGTGGCGTACGCGCCCGAAGGCGAGGTCGGCGCCGACAGCACCGTGCGGATGAACGTCACGCTCGACGTGCTCGCCGACCGCATCTCCCCCAACGTCAACGCCACCGACCTCATCTTCGGCCAGGGCTACAACCTCACCAGCTACACGGAGATCAGCGGGAGGGTGAACGTGCTGGGGATCTACAAGAGGAACCTCGACATCAAGATGAACTGCTCCATCACGCTGGAGGTCAGCGCCCTGTCCACCGTGCAGAGCAAGAGCACGAACTGTGTCGCCAGCGTCAGCTGATCGCTCGCTCGCTCGCGAGATGGGATTTGGGGATCCATCGATCGTGTTCTATAATTATAATCTCTTGGTGGACTGATATTTTCGTGTCACTTAGATTTAATTACTTGGGGTTTTTTTTCTGTATTAATTAAACTTGGACTCTTGTGTGATTGACTTTTTGAGTTATTATTATATGAGTTCAAATGGCAAAAAA]

[+] EMBL AK111351             [AGCATCGCCGCGCGCCATCGCCCACCTGACTACCTGAGATCAGCTAAGCTAAGCTAAGCTTGCTTCCGCGCCATGGCGACCGTCGGGCCGTACGGCGAGGCCGAGAAGAACGAGCCGGCGAGGCCGCTCGCGCTCCCGTCGCCGTCCGTCCACCCGGCGGCCAACGACGACGAGGAGGCCGCCCGCGCGGCGGCGGCGGCGGCGGGGGACACCGCCGCCAACAAGCGCCCGCGCTCCCCGCAGTACCTCCGCAGGCGGCGCTGCGTGATCTGGTGCGGCGGCTGCTGCGTCACCTCGGCGGTCGTCGTCGGCATCGTCATCCTGGTGCTGGCGCTCACGGTGTTCAAGGTGAAGGACCCGGAGCTGACCATGAACCGCGTCACGCTGGAGGGCCTCGACGGCGACCTCGGCACGTCGAGGCACCCGGTGTCCGTGAACGCCACGCTCAACGCCGACGTCTCCCTCCGGAACCCCAACGTGGCGTCGTTCCGGTTCGACCGCAGCGAGACGGACTTCTACTACGCCGGGGAGACCGTCGGCGTGGCGTACGCGCCCGAAGGCGAGGTCGGCGCCGACAGCACCGTGCGGATGAACGTCACGCTCGACGTGCTCGCCGACCGCATCTCCCCCAACGTCAACGCCACCGACCTCATCTTCGGCCAGGGCTACAACCTCACCAGCTACACGGAGATCAGCGGGAGGGTGAACGTGCTGGGGATCTACAAGAGGAACCTCGACATCAAGATGAACTGCTCCATCACGCTGGAGGTCAGCGCCCTGTCCACCGTGCAGAGCAAGAGCACGAACTGTGTCGCCAGCGTCAGCTGATCGCTCGCTCGCTCGCGAGATGGGATTTGGGGATCCATCGATCGTGTTCTATAATTATAATCTCTTGGTGGACTGATATTTTCGTGTCACTTAGATTTAATTACTTGGGGTTTTTTTTCTGTATTAATTAAACTTGGACTCTTGTGTGATTGACTTTTTGAGTTATTATTATATGAG                ]
[-] EMBL CF317271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACCGTGCAGAGCAAGAGCACGAACTGTGTCGCCAGCGTCAGCTGATCGCTCGCTCGCTCGCGAGATGGGATTTGGGGATCCATCGATCGTGTTCTATAATTATAATCTCTTGGTGGGCTGATATTTTCGTGTCACTTAGATTTAATTACTTGGGGTTTTTTTTCTGTATTAATTAAACTTGGATTCTTGTGTGATTGACTTTTTGAGTTATTATTATATGAGTTCAAATGGCAAAAAA]


>consensus_3173#0 AGCATCGCCGCGCGCCATCGCCCACCTGACTACCTGAGATCAGCTAAGCTAAGCTAAGCT TGCTTCCGCGCCATGGCGACCGTCGGGCCGTACGGCGAGGCCGAGAAGAACGAGCCGGCG AGGCCGCTCGCGCTCCCGTCGCCGTCCGTCCACCCGGCGGCCAACGACGACGAGGAGGCC GCCCGCGCGGCGGCGGCGGCGGCGGGGGACACCGCCGCCAACAAGCGCCCGCGCTCCCCG CAGTACCTCCGCAGGCGGCGCTGCGTGATCTGGTGCGGCGGCTGCTGCGTCACCTCGGCG GTCGTCGTCGGCATCGTCATCCTGGTGCTGGCGCTCACGGTGTTCAAGGTGAAGGACCCG GAGCTGACCATGAACCGCGTCACGCTGGAGGGCCTCGACGGCGACCTCGGCACGTCGAGG CACCCGGTGTCCGTGAACGCCACGCTCAACGCCGACGTCTCCCTCCGGAACCCCAACGTG GCGTCGTTCCGGTTCGACCGCAGCGAGACGGACTTCTACTACGCCGGGGAGACCGTCGGC GTGGCGTACGCGCCCGAAGGCGAGGTCGGCGCCGACAGCACCGTGCGGATGAACGTCACG CTCGACGTGCTCGCCGACCGCATCTCCCCCAACGTCAACGCCACCGACCTCATCTTCGGC CAGGGCTACAACCTCACCAGCTACACGGAGATCAGCGGGAGGGTGAACGTGCTGGGGATC TACAAGAGGAACCTCGACATCAAGATGAACTGCTCCATCACGCTGGAGGTCAGCGCCCTG TCCACCGTGCAGAGCAAGAGCACGAACTGTGTCGCCAGCGTCAGCTGATCGCTCGCTCGC TCGCGAGATGGGATTTGGGGATCCATCGATCGTGTTCTATAATTATAATCTCTTGGTGGA CTGATATTTTCGTGTCACTTAGATTTAATTACTTGGGGTTTTTTTTCTGTATTAATTAAA CTTGGACTCTTGTGTGATTGACTTTTTGAGTTATTATTATATGAGTTCAAATGGCAAAAA A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)