Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3176 cluster # 3176       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3176#0 length = 408 sequences # 2  
consensusID : consensus_3176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 408
fasta sequence 
                              [CCTCAGCCTCAGGTGGTCGAGAGGACTCCACCTCTCCGCTGCCGCTATCCCCGCCTCGCGCCGCGCCACCATGCCGCTCCTCGCCGCCGCCGC-GNGNTGGCGCCGCCGTTGTCTTCCTTCCACTCGCTCTCCCTCTCCTCACGCGGACTCCGGGTCCCCTCCCCCTGGCGAGGCCCGCCCGCGCGCGCCGCTCCGG-GNGNGGGACCTCGCCATCCGCATGGGCGGCGGCCCGCGCACGTTCCCCGGCGGCGTCTCCAAGTGGCAGTGGAAGCGGATGCAGGCGAGGAAGGCCAAGCAGCTGCTCAAGGCGCGCCTTCGCCCGGGAGCGCCAG-TCTTACGAGATGCGCAA-CGCGCCGAGCTCCGCGAACGCCGCCGCGCA-CTCGAGCGCCCCTGGGACCCCGACGCCTC]

[+] EMBL AU166085             [CCTCAGCCTCAGGTGGTCGAGAGGACTCCACCTCTCCGCTGCCGCTATCCCCGCCTCGCGCCGCGCCACCATGCCGCTCCTCGCCGCCGCCGC GNGNTGGCGCCGCCGTTGTCTTCCTTCCACTCGCTCTCCCTCTCCTCACGCGGACTCCGGGTCCCCTCCCCCTGGCGAGGCCCGCCCGCGCGCGCCGCTCCGG GNGNGGGACCTCGCCATCCGCATGGGCGGCGGCCCGCGCACGTTCCCCGGCGGCGTCTCCAAGTGGCAGTGGAAGCGGATGCAGGCGAGGAAGGCCAAGCAGCTGCTCAAGGCGCGCCTTCGCCCGGGAGCGCCAG TCTTACGAGATGCGCAA CGCGCCGAGCTCCGCGAACGCCGCCGCGCA CTCGAGCGCCCCTGGGACCCCGACG    ]
[+] EMBL CB674204             [                        ACTCCACCTCTCCGCTGCCGCTATCCCCGCCTCGCGCCGCGCCACCATGCCGCTCCTCGCCGCCGCCGCGGCGGTGGCGCCGCCGTTGTCTTCCTTCCACTCGCTCTCCCTCTCCTCACGCGGACTCCGGGTCCCCTCCCCCT GCGAGGCCCGCCCGCGCGCGCCGCTCCGGCGCG GGGACCTCGCCATCCGCATGGGCGGCGGCCCGCGCACGTTCCCCGGCGGCGTCTCCAAGTGGCAGTGGAAGCGGATGCAGGCGAGGAAGGCCAAGCAGCTGCTCAAGGCGCGCC TCGCCCGGGAGCGCCAGCTC TACGAGATGCGCAAGCGCGCCGAGCTCCGCG ACGCCGCCGCGCACCTCGAGCGCCCCTGGGACCCCGACGCCTC]




>consensus_3176#0
CCTCAGCCTCAGGTGGTCGAGAGGACTCCACCTCTCCGCTGCCGCTATCCCCGCCTCGCG
CCGCGCCACCATGCCGCTCCTCGCCGCCGCCGCGNGNTGGCGCCGCCGTTGTCTTCCTTC
CACTCGCTCTCCCTCTCCTCACGCGGACTCCGGGTCCCCTCCCCCTGGCGAGGCCCGCCC
GCGCGCGCCGCTCCGGGNGNGGGACCTCGCCATCCGCATGGGCGGCGGCCCGCGCACGTT
CCCCGGCGGCGTCTCCAAGTGGCAGTGGAAGCGGATGCAGGCGAGGAAGGCCAAGCAGCT
GCTCAAGGCGCGCCTTCGCCCGGGAGCGCCAGTCTTACGAGATGCGCAACGCGCCGAGCT
CCGCGAACGCCGCCGCGCACTCGAGCGCCCCTGGGACCCCGACGCCTC

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)