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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3180 cluster # 3180       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3180#0 length = 531 sequences # 2  

consensusID : consensus_3180#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 531
fasta sequence
                              [TTGATATCTGCCATGAAGGGCAGCAGCAGGCTNGTGCTGAGCAGAAGCGGCAGCAGCTGATGCTTAACAACATAATACTTCCTGTCATGGAGGTTGCGTTGTCTTGTGCTCTGGAGTCTCCTGATGAACGAAGCACCATGCGCGATGCTCTCTGTAGGTTGAAACGAATCAAGGAGGCTTTCTTGAAGAATCATAGCTTTTAATATGATAACCGAAGAGGTTACAAGCTGCCCATTTCTAAAGTACC-TTTTGTATTTGTATATTTAGATATTTTCCCTGAAAAATGAGGTCGGATCAGACACCAGATTAATTAAACTTATTTATTTTTTGTCATGTAGCTATTATTAATGAAACATATGTGTATTTCTAATGTGTCGCACTTGGACATCTGAAGTACATGGCAGTGACAATGGATCAAGCAGGAGTATGCATGTGTTGAAGTGAAGGAATGCTTCTTGATCTAAAGTTCTCACCAGTTATATATGCAAAGATATAAGTGTTATGCATGTGCCCTTACTGGCAGGGCAAATT]

[+] EMBL CA765816             [TTGATATCTGCCATGAAGGGCAGCAGCAGGCTNGTGCTGAGCAGAAGCGGCAGCAGCTGATGCTTAACAACATAATACTTCCTGTCATGGAGGTTGCGTTGTCTTGTGCTCTGGAGTCTCCTGATGAACGAAGCACCATGCGCGATGCTCTCTGTAGGTTGAAACGAATCAAGGAGGCTTTCTTGAAGAATCATAGCTTTTAATATGATAACCGAAGAGGTTACAAGCTGCCCATTTCTAAAGTACC TTTTGTATTTGTATATTTAGATATTTTCCCTGAAAAATGAGGTCGGATCAGACACCAGATTAATTAAACTTATTTAT                                                                                                                                                                                                               ]
[+] EMBL AK105220             [   ATATCTGCCATGAAGGGCAGCAGCAGGCTAGTGCTGAGCAGAAGCGGCAGCAGCTGATGCTTAACAACATAATACTTCCTGTCATGGAGGTTGCGTTGTCTTGTGCTCTGGAGTCTCCTGATGAACGAAGCACCATGCGCGATGCTCTCTGTAGATTGAAACGAATCAAGGAGGCTTTCTTGAAGAATCATAGCTTTTAATATGATAACCGAAGAGGTTACAAGCTGCCCATTTCTAAAGTACCTTTTTGTATTTGTATGTTTAGATATTTTCCCTGAAAAATGAGGTCGGATCAGACACCAGATTAATTAAACTTATTTATTTTTTGTCATGTAGCTATTATTAATGAAACATATGTGTATTTCTAATGTGTCGCACTTGGACATCTGAAGTACATGGCAGTGACAATGGATCAAGCAGGAGTATGCATGTGTTGAAGTGAAGGAATGCTTCTTGATCTAAAGTTCTCACCAGTTATATATGCAAAGATATAAGTGTTATGCATGTGCCCTTACTGGCAGGGCAAATT]


>consensus_3180#0 TTGATATCTGCCATGAAGGGCAGCAGCAGGCTNGTGCTGAGCAGAAGCGGCAGCAGCTGA TGCTTAACAACATAATACTTCCTGTCATGGAGGTTGCGTTGTCTTGTGCTCTGGAGTCTC CTGATGAACGAAGCACCATGCGCGATGCTCTCTGTAGGTTGAAACGAATCAAGGAGGCTT TCTTGAAGAATCATAGCTTTTAATATGATAACCGAAGAGGTTACAAGCTGCCCATTTCTA AAGTACCTTTTGTATTTGTATATTTAGATATTTTCCCTGAAAAATGAGGTCGGATCAGAC ACCAGATTAATTAAACTTATTTATTTTTTGTCATGTAGCTATTATTAATGAAACATATGT GTATTTCTAATGTGTCGCACTTGGACATCTGAAGTACATGGCAGTGACAATGGATCAAGC AGGAGTATGCATGTGTTGAAGTGAAGGAATGCTTCTTGATCTAAAGTTCTCACCAGTTAT ATATGCAAAGATATAAGTGTTATGCATGTGCCCTTACTGGCAGGGCAAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)