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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3228 cluster # 3228       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3228#0 length = 693 sequences # 2  

consensusID : consensus_3228#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 693
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAGCTGGCATTGCAAATCCAATCTGAATTGCCATGGGAAAATATTGAGAGAACACTCTCATTTTACAACAATTACCCAAAGCAGGTCACATTATAATCAGCAAAAACAGGCTCCAAACAATGCAGGGCACTAATTACGTGCACACATACCCCAATGATAGGAATTCACGGTAAGTAAGTACAGCTCGTTATTAAGCTTCTGTTAAGGGAAAATCACTTCAGTTCGCCCCTGTCTGATATGAGGACTTTGGACCGGGGAGTACCACTCTGACTGCCTTCAGCTTCAATCTTGGAAACCACGTCCATTCCAAAAAGCACCTTGCCAAACACAACATGCTTCCCATCCAACCGGGTTAGCTTTACGGGGGGGATAAAAAACTGGGATCCGTTTGTATCTTTCGCATAGTTGGCCATGGACAGCAACCCTGGTGCAAAGGGGTTGATCTTGAAGTTCTCATCAGGGAACATTCCACCATAGATCGAATCACAGCCGGTTCCATTGCCAATCACGGTGTCCCCTCCTTGGATCATGAAACCTGGGATGATCCTGTGGAATGGCGTTCCTTTGTAGGAAAGAGGTTTGCCACTCTTGCCAAGGCCTTTCTCACCTGTGCAAATTGCTCGGAAGTTCTCTGCTGTTTTAGGAACAGTGTTTCC]

[+] EMBL CA759859             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAGCTGGCATTGCAAATCCAATCTGAATTGCCATGGGAAAATATTGAGAGAACACTCTCATTTTACAACAATTACCCAAAGCAGGTCACATTATAATCAGCAAAAACAGGCTCCAAACAATGCAGGGCACTAATTACGTGCACACATACCCCAATGATAGGAATTCACGGTAAGTAAGTACAGCTCGTTATTAAGCTTCTGTTAAGGGAAAATCACTTCAGTTCGCCCCTGTCTGATATGAGGACTTTGGACCGGGGAGTACCACTCTGACTGCCTTCAGCTTCAATCTTGGAAACCACGTCCATTCCAAAAAGCACCTTGCCAAACACAACATGCTTCCCATCCAACCGGGTTAGCTTTACGGGGGGGATAAAAAACTGGGATCCGTTTGTATCTTTCGCATAGTTGGCCATGGACAGCAACCCTGGTGCAAAGGGGTTGATCTTGAAGTTCTCATCAGGGAACATTCCACCATAGATCGAATCACAGCCGGTTCCATTGCCAATCACGGTGTCCCCTCCTTGGATCATGAAACCTGGGATGATCCTGTGGAATGGCGTTCCTTTGTAGGAAAGAGGTTTGCCACTCTTGCCAAGGCCTTTCTCACCTGTGCAAATTGCTCGGAAGTTCTCTGCTGTTTTAGGAACAGTGTTTCC]
[-] EMBL AU069815             [                                tttttAAGCTTGCATTGCATATCCAATCTGAATTGCCATGGGNAAATATTGAGAGAACACTCTCATTTTACNANAATTACACAAAGCAGGTCACATTATAATCAGCAGAAACAGGCTCCAAACAATGCATGGCACTAATGACGTGCACACATACTCCAATGATAGGAATTCACGGTAAGTAAGTACAGCTCGTTATTAAGCTTCTGTTAATGGAAGATCACTTCAGTTCGCCGCTGTCTGATATGAGGACTTTGGACCGTGGAGTACCACT                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_3228#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAGCTGGCATTGCAAATCCAATC TGAATTGCCATGGGAAAATATTGAGAGAACACTCTCATTTTACAACAATTACCCAAAGCA GGTCACATTATAATCAGCAAAAACAGGCTCCAAACAATGCAGGGCACTAATTACGTGCAC ACATACCCCAATGATAGGAATTCACGGTAAGTAAGTACAGCTCGTTATTAAGCTTCTGTT AAGGGAAAATCACTTCAGTTCGCCCCTGTCTGATATGAGGACTTTGGACCGGGGAGTACC ACTCTGACTGCCTTCAGCTTCAATCTTGGAAACCACGTCCATTCCAAAAAGCACCTTGCC AAACACAACATGCTTCCCATCCAACCGGGTTAGCTTTACGGGGGGGATAAAAAACTGGGA TCCGTTTGTATCTTTCGCATAGTTGGCCATGGACAGCAACCCTGGTGCAAAGGGGTTGAT CTTGAAGTTCTCATCAGGGAACATTCCACCATAGATCGAATCACAGCCGGTTCCATTGCC AATCACGGTGTCCCCTCCTTGGATCATGAAACCTGGGATGATCCTGTGGAATGGCGTTCC TTTGTAGGAAAGAGGTTTGCCACTCTTGCCAAGGCCTTTCTCACCTGTGCAAATTGCTCG GAAGTTCTCTGCTGTTTTAGGAACAGTGTTTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)