Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3236 cluster # 3236       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3236#0 length = 679 sequences # 2  

consensusID : consensus_3236#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 679
fasta sequence
                              [CCCCACCACCACCATCGCCAAAACCCTAGCTTCCCCCAACCCCCCCGCCGTGGGATGGGATGCCGTCCCCCCACCGCCTGAGCGCCGCCGCCGCCGCCTGGATGTCCGCATGGACGGCTACCGGGCCCTGATCGCCGCCGGGGCCACCGCCGTCTGCTGCCTCGTCTGCGCCGTCTGGGCCTTCTCCTCCTCCTCCTCCTCCTCCGCCTCCAAGAAGCATCAGCGTCAGCGTCAGCAGCGTCCGCTGTCCCCGGGGTGCTGCGGCTGCGCCCGCTGCGGGTGCCGCGCCGCGGCCGTCAACGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCGCCCGCCGCCGCCGCCGCCGCCGCGGCCGCGGGGGCGTCCATGATGGAGCAGCTCGTGCCGGAGATCACCACCCACGCGCTCAGCTACCTCGACTACACCAGCCTCTGCCGCCTCTCCATGACCAACTCCGCGATGCGCCGCGCCGCCAACGACGACGGCGCCTGGAAGGCGCTCTACCACAAGGATTTTACAGTGGAGCAGCACAACATAACACCACCAAACGGATGGAAGGCATATTATGCAGCTACAAAAAGCCATCATGAACGTGAATACTGAGTTCTATAATATCATCAGGGAAGGGTCCTTTGCCAGCAATGAGTCACTTCTGGC]

[+] EMBL AU182160             [CCCCACCACCACCATCGCCAAAACCCTAGCTTCCCCCAACCCCCCCGCCGTGGGATGGGATGCCGTCCCCCCACCGCCTGAGCGCCGCCGCCGCCGCCTGGATGTCCGCATGGACGGCTACCGGGCCCTGATCGCCGCCGGGGCCACCGCCGTCTGCTGCCTCGTCTGCGCCGTCTGGGCCTTCTCCTCCTCCTCCTCCTCCTCCGCCTCCAAGAAGCATCAGCGTCAGCGTCAGCAGCGTCCGCTGTCCCCGGGGTGCTGCGGCTGCGCCCGCTGCGGGTGCCGCGCCGCGGCCGTCAACGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCGCCCGCCG                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU166675             [                                                                                                                                                                                                                                                                                              GCCGCGGCCGTCAACGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCGCCCGCCGCCGCCGCCGCCGCCGCGGCCGCGGGGGCGTCCATGATGGAGCAGCTCGTGCCGGAGATCACCACCCACGCGCTCAGCTACCTCGACTACACCAGCCTCTGCCGCCTCTCCATGACCAACTCCGCGATGCGCCGCGCCGCCAACGACGACGGCGCCTGGAAGGCGCTCTACCACAAGGATTTTACAGTGGAGCAGCACAACATAACACCACCAAACGGATGGAAGGCATATTATGCAGCTACAAAAAGCCATCATGAACGTGAATACTGAGTTCTATAATATCATCAGGGAAGGGTCCTTTGCCAGCAATGAGTCACTTCTGGC]


>consensus_3236#0 CCCCACCACCACCATCGCCAAAACCCTAGCTTCCCCCAACCCCCCCGCCGTGGGATGGGA TGCCGTCCCCCCACCGCCTGAGCGCCGCCGCCGCCGCCTGGATGTCCGCATGGACGGCTA CCGGGCCCTGATCGCCGCCGGGGCCACCGCCGTCTGCTGCCTCGTCTGCGCCGTCTGGGC CTTCTCCTCCTCCTCCTCCTCCTCCGCCTCCAAGAAGCATCAGCGTCAGCGTCAGCAGCG TCCGCTGTCCCCGGGGTGCTGCGGCTGCGCCCGCTGCGGGTGCCGCGCCGCGGCCGTCAA CGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCGCCCGCCGCCGC CGCCGCCGCCGCGGCCGCGGGGGCGTCCATGATGGAGCAGCTCGTGCCGGAGATCACCAC CCACGCGCTCAGCTACCTCGACTACACCAGCCTCTGCCGCCTCTCCATGACCAACTCCGC GATGCGCCGCGCCGCCAACGACGACGGCGCCTGGAAGGCGCTCTACCACAAGGATTTTAC AGTGGAGCAGCACAACATAACACCACCAAACGGATGGAAGGCATATTATGCAGCTACAAA AAGCCATCATGAACGTGAATACTGAGTTCTATAATATCATCAGGGAAGGGTCCTTTGCCA GCAATGAGTCACTTCTGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)