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Oryza sativa
cluster # 324 cluster # 324       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_324#0 length = 1459 sequences # 2  

consensusID : consensus_324#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1459
fasta sequence
                              [CAGCACGGCGGCAGCACTCAAACGTTCATTCACCGCACAACACCACACTCGCGGACTCGCCCATATGGCCACCTTCTCCGGCACCGACCGCCTCCGCGACCTCCACGCCTTCGACGACACCAAGGCCGGCGTCAAGGGCCTCGTCGACGCCGGCGTCACCACCGTCCCCTACTTCTTCCGCCACCACCCCGACCCACTCCCCGTCGCCGCGCCGTCGGAGGCCGCCGCGGCCATCCCTCTCATCGACCTCGCCAAGGCCGACGTCGACCGTGGCCACGTCGTCTCCCAGGTGAGGTCCGCCGCCGAGTCGGCCGGGCTTTTCCAGGTGGTGAACCACGGCGTCGCCGGGGAGCTCATGGACGCGATGCTCGCGGCGGCGCGGCGGTTCAACGAGCAGCCCGCGGAGGCGAAGGCGCCCTACTACACCAGGGACCTCGGCAGCAAGGTCCGGTTCTTCTGCAACTTCGACCTGTTCCAGTCGCCGGCGGCGCAGTGGCGCGACACGCTGTACGTGGAGATGGTGCCCGACGCGCCCTCGCCGGAGGAGATCCCGCCGCCGCTCAGGGGCGTCGCGGAGGAGTTCGCCGCGGCGGTGTGGCGGCTCGGCGAGCGGGTGACCGAGCTGCTCTCGGAGGCGCTGGGCCTTCCCCCCGGGTACCTCGCCGAGCACGCCGGGTGCATGGACGGCATGAGCATGGTGGCGCAGTACTACCCGCCGTGCCCGGAGCCGGAGAAGACGATGGGCACGACGCGGCACTCCGACCCGAGCTTCCTCACCGTGCTGCTGCAGGACGAGTCCGGCGGGCTCCAGGCGGTGCTCCCGCGGCCCCCGGAGGAGCGGTGGGTGGACGTGCCCCCGGTGGCCGGCGCGCTGGTGGTGAACGTCGGCGACCTCCTCCAGCTGGTGTCGAACGGCCGGCTCCGGAGCATGGAGCACCGGGTGCTGCCCACCGCCGCCAGCGCGGCGCGGGCCCGCGTGGCGGTGGCGTGCTTCTTCCGGCTCGAGTACTCGGCGTCGTTGACGAGGCCGAGGTCGTACGGCCCGATCGTGGATTCCGGCGAAGGCGGCGCGCGGCGGGCGGCGGCGGTGTACAGGAGCACGACGCCGAGGGATTTCCTGGCGTACTTCAACGGCAAGGGGCTCGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTTCTTCCGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAGCAATCGTGTCGGTGCGTGTTGAGGTTGTTGCTTGCTGGTAGCTAGTGTGTGTTATCCGGAAGGGTCGTAGCAGTGTACGCGTGGCGATTTGTTGGTTGCCAGTCAGGTTAGGCCAGGTGTTACGTCACTGATTAATTTGTATGATCGTACTATGGATGGCATGTAAAACTTGGTGATTTTTGTACTGTAATAAATGTCGATCTT]

[+] EMBL AK068286             [CAGCACGGCGGCAGCACTCAAACGTTCATTCACCGCACAACACCACACTCGCGGACTCGCCCATATGGCCACCTTCTCCGGCACCGACCGCCTCCGCGACCTCCACGCCTTCGACGACACCAAGGCCGGCGTCAAGGGCCTCGTCGACGCCGGCGTCACCACCGTCCCCTACTTCTTCCGCCACCACCCCGACCCACTCCCCGTCGCCGCGCCGTCGGAGGCCGCCGCGGCCATCCCTCTCATCGACCTCGCCAAGGCCGACGTCGACCGTGGCCACGTCGTCTCCCAGGTGAGGTCCGCCGCCGAGTCGGCCGGGCTTTTCCAGGTGGTGAACCACGGCGTCGCCGGGGAGCTCATGGACGCGATGCTCGCGGCGGCGCGGCGGTTCAACGAGCAGCCCGCGGAGGCGAAGGCGCCCTACTACACCAGGGACCTCGGCAGCAAGGTCCGGTTCTTCTGCAACTTCGACCTGTTCCAGTCGCCGGCGGCGCAGTGGCGCGACACGCTGTACGTGGAGATGGTGCCCGACGCGCCCTCGCCGGAGGAGATCCCGCCGCCGCTCAGGGGCGTCGCGGAGGAGTTCGCCGCGGCGGTGTGGCGGCTCGGCGAGCGGGTGACCGAGCTGCTCTCGGAGGCGCTGGGCCTTCCCCCCGGGTACCTCGCCGAGCACGCCGGGTGCATGGACGGCATGAGCATGGTGGCGCAGTACTACCCGCCGTGCCCGGAGCCGGAGAAGACGATGGGCACGACGCGGCACTCCGACCCGAGCTTCCTCACCGTGCTGCTGCAGGACGAGTCCGGCGGGCTCCAGGCGGTGCTCCCGCGGCCCCCGGAGGAGCGGTGGGTGGACGTGCCCCCGGTGGCCGGCGCGCTGGTGGTGAACGTCGGCGACCTCCTCCAGCTGGTGTCGAACGGCCGGCTCCGGAGCATGGAGCACCGGGTGCTGCCCACCGCCGCCAGCGCGGCGCGGGCCCGCGTGGCGGTGGCGTGCTTCTTCCGGCTCGAGTACTCGGCGTCGTTGACGAGGCCGAGGTCGTACGGCCCGATCGTGGATTCCGGCGAAGGCGGCGCGCGGCGGGCGGCGGCGGTGTACAGGAGCACGACGCCGAGGGATTTCCTGGCGTACTTCAACGGCAAGGGGCTCGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTTCTTCCGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAGCAATCGTGTCGGTGCGTGTTGAGGTTGTTGCTTGCTGGTAGCTAGTGTGTGTTATCCGGAAGGGTCGTAGCAGTGTACGCGTGGCGATTTGTTGGTTGCCAGTCAGGTTAGGCCAGGTGTTACGTCACTGATTAATTTGTATGATCGTACTATGGATGGCATGTAAAACTTGGTGATTTTTGTACTGTAATAAATGTCGATCTT]
[+] EMBL CB000115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGGATTTCCTGGCGTACTTCAACGGCAAGGGGCTTGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTTCTTCCGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAGCAATCGTGTCGGTGCGTGTTGAGGTTGTTGCTTGCTGGTAGCTAGTGTGTGTTATCCGGAAGGGTCGTAGCAGTGTACGCGTGGCGATTTGTTGGTTGCCAGTCAGGTTAGGCCAGGTGTTACGTCACTGATTAATTTGTATGATCGTACTATGGATGGCATGTAAAACTTGGTGATTTTTGTTTTGTAATAAATGTCGA    ]


>consensus_324#0 CAGCACGGCGGCAGCACTCAAACGTTCATTCACCGCACAACACCACACTCGCGGACTCGC CCATATGGCCACCTTCTCCGGCACCGACCGCCTCCGCGACCTCCACGCCTTCGACGACAC CAAGGCCGGCGTCAAGGGCCTCGTCGACGCCGGCGTCACCACCGTCCCCTACTTCTTCCG CCACCACCCCGACCCACTCCCCGTCGCCGCGCCGTCGGAGGCCGCCGCGGCCATCCCTCT CATCGACCTCGCCAAGGCCGACGTCGACCGTGGCCACGTCGTCTCCCAGGTGAGGTCCGC CGCCGAGTCGGCCGGGCTTTTCCAGGTGGTGAACCACGGCGTCGCCGGGGAGCTCATGGA CGCGATGCTCGCGGCGGCGCGGCGGTTCAACGAGCAGCCCGCGGAGGCGAAGGCGCCCTA CTACACCAGGGACCTCGGCAGCAAGGTCCGGTTCTTCTGCAACTTCGACCTGTTCCAGTC GCCGGCGGCGCAGTGGCGCGACACGCTGTACGTGGAGATGGTGCCCGACGCGCCCTCGCC GGAGGAGATCCCGCCGCCGCTCAGGGGCGTCGCGGAGGAGTTCGCCGCGGCGGTGTGGCG GCTCGGCGAGCGGGTGACCGAGCTGCTCTCGGAGGCGCTGGGCCTTCCCCCCGGGTACCT CGCCGAGCACGCCGGGTGCATGGACGGCATGAGCATGGTGGCGCAGTACTACCCGCCGTG CCCGGAGCCGGAGAAGACGATGGGCACGACGCGGCACTCCGACCCGAGCTTCCTCACCGT GCTGCTGCAGGACGAGTCCGGCGGGCTCCAGGCGGTGCTCCCGCGGCCCCCGGAGGAGCG GTGGGTGGACGTGCCCCCGGTGGCCGGCGCGCTGGTGGTGAACGTCGGCGACCTCCTCCA GCTGGTGTCGAACGGCCGGCTCCGGAGCATGGAGCACCGGGTGCTGCCCACCGCCGCCAG CGCGGCGCGGGCCCGCGTGGCGGTGGCGTGCTTCTTCCGGCTCGAGTACTCGGCGTCGTT GACGAGGCCGAGGTCGTACGGCCCGATCGTGGATTCCGGCGAAGGCGGCGCGCGGCGGGC GGCGGCGGTGTACAGGAGCACGACGCCGAGGGATTTCCTGGCGTACTTCAACGGCAAGGG GCTCGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTTCTTC CGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAGCAATC GTGTCGGTGCGTGTTGAGGTTGTTGCTTGCTGGTAGCTAGTGTGTGTTATCCGGAAGGGT CGTAGCAGTGTACGCGTGGCGATTTGTTGGTTGCCAGTCAGGTTAGGCCAGGTGTTACGT CACTGATTAATTTGTATGATCGTACTATGGATGGCATGTAAAACTTGGTGATTTTTGTAC TGTAATAAATGTCGATCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)