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Oryza sativa
cluster # 3268 cluster # 3268       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3268#0 length = 1480 sequences # 2  

consensusID : consensus_3268#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1480
fasta sequence
                              [CAAAGACCTGGCATAGCTAAAAGCCCCAAAGGATGGTTGGTTGGTTGGTTGGTTGGTGAGTTGTCTCCAATCTCCAAACTCCAAGAACAAGAATGCCAAATCAAAAGAGCACAAGTGCTAATTAAGCAAGATGCCTAAGGCCTGGTGGTGCTCGCCGGCGATGCCAGCTGCTCGACGGCGACACCGCCGCCTTTTGCGCCTCGCTGGTGGACGGCCTCGCGCAGCTGGAGAGCACGCTGCTTCGTGAGGAGGACGACGGCGATGGCGGCGGCGGCGGCGGTGGGGCGGTGTCGATGAGGTGGTGCGCCGACGCCATGAGGCTGGTGAAGCGGATGCAGCGGGAGCTTCTGGTCATGTTCAAGAAGGCCGACGTGCCGGTGGGCAGCGCCGTCTCCTACGGCGGCGGCGGCGGAGGCGGCGACGGCGGCGGGTGCTGGTTCGAGCACTACATGCAGGGGACGGCGGCGCTGCTCGACTTCTGCAACGCGTTCAAGTCCGCCGTGTCGCGGCTGCACCGCTACTGCATGGTCGTCGACTTCGCCGCGCAGGTCGGCTGCGCCGGCGGCTGGTGGCTGGAGGAGGAGCCGGGCGGCGACGACGCGGGCGCCATCCGCCACAGGCTGTCCGACGTGAGGGCGGCGGTGAGCGAGGCGGAGCGGCTAGGGAGGAAGATCATGTCTAGCTCCAGCGGCGGCGGCGGCGCCGGGGACGACGACGCCGGCGGCATGGTGGTCGTCATGCTCGTCGCCAAGATCACCATGGCCGTCGTGTCGATGTTCGTGCTCCAGGCCCTCACCTCACCCATCGTCCCCCTCGCCGCCGACGTCGACGACGGCCACTGCACCCTTGGCCGCGCCGCCGCCGTCCCGGTCCCCGAGCTCCAGCCATGGCGAGAATCCCTCTCCGTGATCACCGACCGGTTCCCGAGGCGGCCGGGCGTCGCCGAGCACGAGAGGGTGGCCATGGTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGAGACCAAAAATGGCAAACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATCAGGTGAGCTCAGGGAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGAGGTGATCAAGGGCAGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGGCTGAATTTTTAGATGTTAGCTAATCTCTGAAAAGTTAATTGACCTTGAGCAATCTGGAAACCAGCAGGGTATGTATGTAACCTGGGGTGGATGCTAATTTGACTGATCAATTTGAGTTGTTTTGTTGAGGGTTTAGAGCTTCTTGCAATGTGTGAGTATGTGTTTATGAAGGTGTTTAATTATATTTGGTTTCCTTTTATACTTTAATTTCTCCTTTGGTTTGTAACTTGTTTCAGTGTGACATACTGATCAATAAAGCATCTGAAGTTTAGATTTGTTTTATAAAAA]

[+] EMBL AK103223             [CAAAGACCTGGCATAGCTAAAAGCCCCAAAGGATGGTTGGTTGGTTGGTTGGTTGGTGAGTTGTCTCCAATCTCCAAACTCCAAGAACAAGAATGCCAAATCAAAAGAGCACAAGTGCTAATTAAGCAAGATGCCTAAGGCCTGGTGGTGCTCGCCGGCGATGCCAGCTGCTCGACGGCGACACCGCCGCCTTTTGCGCCTCGCTGGTGGACGGCCTCGCGCAGCTGGAGAGCACGCTGCTTCGTGAGGAGGACGACGGCGATGGCGGCGGCGGCGGCGGTGGGGCGGTGTCGATGAGGTGGTGCGCCGACGCCATGAGGCTGGTGAAGCGGATGCAGCGGGAGCTTCTGGTCATGTTCAAGAAGGCCGACGTGCCGGTGGGCAGCGCCGTCTCCTACGGCGGCGGCGGCGGAGGCGGCGACGGCGGCGGGTGCTGGTTCGAGCACTACATGCAGGGGACGGCGGCGCTGCTCGACTTCTGCAACGCGTTCAAGTCCGCCGTGTCGCGGCTGCACCGCTACTGCATGGTCGTCGACTTCGCCGCGCAGGTCGGCTGCGCCGGCGGCTGGTGGCTGGAGGAGGAGCCGGGCGGCGACGACGCGGGCGCCATCCGCCACAGGCTGTCCGACGTGAGGGCGGCGGTGAGCGAGGCGGAGCGGCTAGGGAGGAAGATCATGTCTAGCTCCAGCGGCGGCGGCGGCGCCGGGGACGACGACGCCGGCGGCATGGTGGTCGTCATGCTCGTCGCCAAGATCACCATGGCCGTCGTGTCGATGTTCGTGCTCCAGGCCCTCACCTCACCCATCGTCCCCCTCGCCGCCGACGTCGACGACGGCCACTGCACCCTTGGCCGCGCCGCCGCCGTCCCGGTCCCCGAGCTCCAGCCATGGCGAGAATCCCTCTCCGTGATCACCGACCGGTTCCCGAGGCGGCCGGGCGTCGCCGAGCACGAGAGGGTGGCCATGGTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGAGACCAAAAATGGCAAACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATCAGGTGAGCTCAGGGAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGAGGTGATCAAGGGCAGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGGCTGAATTTTTAGATGTTAGCTAATCTCTGAAAAGTTAATTGACCTTGAGCAATCTGGAAACCAGCAGGGTATGTATGTAACCTGGGGTGGATGCTAATTTGACTGATCAATTTGAGTTGTTTTGTTGAGGGTTTAGAGCTTCTTGCAATGTGTGAGTATGTGTTTATGAAGGTGTTTAATTATATTTGGTTTCCTTTTATACTTTAATTTCTCCTTTGGTTTGTAACTTGTTTCAGTGTGACATACTGATCAATAAAGCA                            ]
[+] EMBL BI801225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCGA GC GCC GGC TC CCGAGCACGAGA GGT GCCATGGTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGAGACC AAAATGGC AACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATCAGGTGAGCTCAGGGAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGAGGTGATCAAGGGCAGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGGCTGAATTTTTAGATGTTAGCTAATCTCTGAAAAGTTAATTGACCTTGAGCAATCTGGAAACCAGCAGGGTATGTATGTAACCTGGGGTGGATGCTAATTTGACTGATCAATTTGAGTTGTTTTGTTGAGGGTTTAGAGCTTCTTGCAATGTGTGAGTATGTGTTTATGAAGGTGTTTAATTATATTTGGTTTCCTTTTATACTTTAATTTCTCCTTTGGTTTGTAACTTGTTTCAGTGTGACATACTGATCAATAAAGCATCTGAAGTTTAGATTTGTTTTATAAAAA]


>consensus_3268#0 CAAAGACCTGGCATAGCTAAAAGCCCCAAAGGATGGTTGGTTGGTTGGTTGGTTGGTGAG TTGTCTCCAATCTCCAAACTCCAAGAACAAGAATGCCAAATCAAAAGAGCACAAGTGCTA ATTAAGCAAGATGCCTAAGGCCTGGTGGTGCTCGCCGGCGATGCCAGCTGCTCGACGGCG ACACCGCCGCCTTTTGCGCCTCGCTGGTGGACGGCCTCGCGCAGCTGGAGAGCACGCTGC TTCGTGAGGAGGACGACGGCGATGGCGGCGGCGGCGGCGGTGGGGCGGTGTCGATGAGGT GGTGCGCCGACGCCATGAGGCTGGTGAAGCGGATGCAGCGGGAGCTTCTGGTCATGTTCA AGAAGGCCGACGTGCCGGTGGGCAGCGCCGTCTCCTACGGCGGCGGCGGCGGAGGCGGCG ACGGCGGCGGGTGCTGGTTCGAGCACTACATGCAGGGGACGGCGGCGCTGCTCGACTTCT GCAACGCGTTCAAGTCCGCCGTGTCGCGGCTGCACCGCTACTGCATGGTCGTCGACTTCG CCGCGCAGGTCGGCTGCGCCGGCGGCTGGTGGCTGGAGGAGGAGCCGGGCGGCGACGACG CGGGCGCCATCCGCCACAGGCTGTCCGACGTGAGGGCGGCGGTGAGCGAGGCGGAGCGGC TAGGGAGGAAGATCATGTCTAGCTCCAGCGGCGGCGGCGGCGCCGGGGACGACGACGCCG GCGGCATGGTGGTCGTCATGCTCGTCGCCAAGATCACCATGGCCGTCGTGTCGATGTTCG TGCTCCAGGCCCTCACCTCACCCATCGTCCCCCTCGCCGCCGACGTCGACGACGGCCACT GCACCCTTGGCCGCGCCGCCGCCGTCCCGGTCCCCGAGCTCCAGCCATGGCGAGAATCCC TCTCCGTGATCACCGACCGGTTCCCGAGGCGGCCGGGCGTCGCCGAGCACGAGAGGGTGG CCATGGTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGAGACCAAAA ATGGCAAACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATCAGGTGAGC TCAGGGAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGAGGTGATCA AGGGCAGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGGCTGAATTT TTAGATGTTAGCTAATCTCTGAAAAGTTAATTGACCTTGAGCAATCTGGAAACCAGCAGG GTATGTATGTAACCTGGGGTGGATGCTAATTTGACTGATCAATTTGAGTTGTTTTGTTGA GGGTTTAGAGCTTCTTGCAATGTGTGAGTATGTGTTTATGAAGGTGTTTAATTATATTTG GTTTCCTTTTATACTTTAATTTCTCCTTTGGTTTGTAACTTGTTTCAGTGTGACATACTG ATCAATAAAGCATCTGAAGTTTAGATTTGTTTTATAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)