cluster # 3278

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Oryza sativa
cluster # 3278 cluster # 3278 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3278#0 length = 1980 sequences # 2
consensusID : consensus_3278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1980
fasta sequence
                              [CCTTCCTCCCATCCAAAGCCCACATCTCCTGCAGATCCAACCGCATCTCCGCTCCCCCCTCGCCGCCGCCGACCACCGCAGCGCTCCCTCGCCGCCGCCGGAGGCCCACGCCGCGCAGTCGCGTCCGAGAAGCTCGGAGCTTTTTCAGGCAAGAGGCAGGGGCCCCCCCTCCAAACCCTAACCGTAGCTCCTCCTCCTCCAACTCGTCTCCTCCGCCGGTGGCGGTGGCGGTGGCGGAGATGGAGATGGAGATGGAGATGGTGGTGGCCGTGCCGTCGCCGGAGGTGCCCGCGGAGGAGGAGAGGGCGCTGATCCGGGACATCACCGTCGCCGCCGAGGCCCACGCCAAGGAAGGGGACACCTTCTTCCTCATCACCCACAGGTGGTGGCAAAGTTGGATTGATTATGTCATTCAAGATTTGGCTAATTCAACGAATAATGGTTCTCATCATCATGAGCATGGTTCTAACGTTCTGAGAAGACCAGGAGCAATTGACAATACAGATTTGATAGATGATACTGCATCTGAAGTCTCGAATATGGAGATTGAACTACATGATACATTGGTTGAGGGTCGTGACTATATACTGCTTCCCCAACAAGTCTGGGAAAAGTTGCACGGTTGGTATGGTGGAGGACCAACATTGCCAAGAAAGGCAATCAATACTGGCTTGTCTCAAACTGATTTAGCCATAGAAGTTTATCCTTTACGTCTGCAGTTACTTCTGGCTCCAAAAGGAGAGCAAGCTGTTATAAGGATAAGCAAAAAAGATACAGTTGGCGAACTCCATAAGAAGGCTTGTGAGGTTTTTGATTTGATACCTGATGAGGTCTGCATTTGGGACTACTATGGCCGAACAAGACATTCTTTGATGGATAACTTGGAGAAAACCCTTGATGATGCCAACATTCAAATGGATCAAGATATTCTAGTGGAGGTTACTACCGATGCAAATGGTAGTTTGGATGGTGGTTGCATTGGTTCAATCCAAGAAAATGAATATTTAGAACGAGAATCAACTTCCTTGATTGCAGATGCTTCGAAATCAGGATTATCAAATGAGAATTTTGCATCAAACAATTATACTTCCAGAAGCTACAGCTCTAGTCTTACACAAAGCCAGTACCTGCGATCTTCGAATGGGGACTTAGATAACATGCATGGTACTAGTGCCATGATCACCAGAGGATCTCCTTTAGGTCTTACAGGGCTACTCAACTTGGGAAATACATGTTTCATGAATAGTGCTATACAATGCCTTGTGCACACACCAGAATTCGCTAGATATTTTCGTGAAGATTACCACCGTGAAATAAATTGGCAAAATCCCCTGGGTATGGTGGTAAGTACTCTTTCTACTAGCATGGCGTTGGAGCCTTACGTTTGAACTTAAAGTGCTACAGAGATAGTGATATTATTTTGTAGCATGGCGTTGAAGCCTTACGTTTGAACTTAAAGTGTTACAGAGATAGTGATATTATTTTGTTACATGCATTTGGTTTGATGCCAGTCGAATTTGCTGATTTTAGATTTCTACATAGTATGCAACAACCGAGAGATTTTTGATACTTGGTGAAATTAGTGAAATTGACAATTTTGTTTGTTTTGATTCAGTAACAATTCCCTTTTTTTTTGACGGGAAAGTAACAATTCCCTTGGATATATACTTTTTGTGGGTTGTGCATTCTGTTATGCTACCTGCGTTCAAATTTCTACTTTTTTTCGTTGTATAAGTGACTTATCAAGTTTATTTGATGCTTCTGTTCTTTTTTATGTCAGCCTTTGTCAGTTCATATGGTTGCGCTTGAAATCAATTTTCTGATTTCTTCTTTTGACCAAAAAATTTCTAATTTCTTACAGCAAAGAGAATCTCAGATGCGTGATTCCCTTGTCATATTAAGATAACGGATACAAGCTACAGTTATTAGAAATAATTATTTTTTGGAACATTTTTTGTGCACTGATTTGGTGCGTGTGTA]

[+] EMBL AK106730             [CCTTCCTCCCATCCAAAGCCCACATCTCCTGCAGATCCAACCGCATCTCCGCTCCCCCCTCGCCGCCGCCGACCACCGCAGCGCTCCCTCGCCGCCGCCGGAGGCCCACGCCGCGCAGTCGCGTCCGAGAAGCTCGGAGCTTTTTCAGGCAAGAGGCAGGGGCCCCCCCTCCAAACCCTAACCGTAGCTCCTCCTCCTCCAACTCGTCTCCTCCGCCGGTGGCGGTGGCGGTGGCGGAGATGGAGATGGAGATGGAGATGGTGGTGGCCGTGCCGTCGCCGGAGGTGCCCGCGGAGGAGGAGAGGGCGCTGATCCGGGACATCACCGTCGCCGCCGAGGCCCACGCCAAGGAAGGGGACACCTTCTTCCTCATCACCCACAGGTGGTGGCAAAGTTGGATTGATTATGTCATTCAAGATTTGGCTAATTCAACGAATAATGGTTCTCATCATCATGAGCATGGTTCTAACGTTCTGAGAAGACCAGGAGCAATTGACAATACAGATTTGATAGATGATACTGCATCTGAAGTCTCGAATATGGAGATTGAACTACATGATACATTGGTTGAGGGTCGTGACTATATACTGCTTCCCCAACAAGTCTGGGAAAAGTTGCACGGTTGGTATGGTGGAGGACCAACATTGCCAAGAAAGGCAATCAATACTGGCTTGTCTCAAACTGATTTAGCCATAGAAGTTTATCCTTTACGTCTGCAGTTACTTCTGGCTCCAAAAGGAGAGCAAGCTGTTATAAGGATAAGCAAAAAAGATACAGTTGGCGAACTCCATAAGAAGGCTTGTGAGGTTTTTGATTTGATACCTGATGAGGTCTGCATTTGGGACTACTATGGCCGAACAAGACATTCTTTGATGGATAACTTGGAGAAAACCCTTGATGATGCCAACATTCAAATGGATCAAGATATTCTAGTGGAGGTTACTACCGATGCAAATGGTAGTTTGGATGGTGGTTGCATTGGTTCAATCCAAGAAAATGAATATTTAGAACGAGAATCAACTTCCTTGATTGCAGATGCTTCGAAATCAGGATTATCAAATGAGAATTTTGCATCAAACAATTATACTTCCAGAAGCTACAGCTCTAGTCTTACACAAAGCCAGTACCTGCGATCTTCGAATGGGGACTTAGATAACATGCATGGTACTAGTGCCATGATCACCAGAGGATCTCCTTTAGGTCTTACAGGGCTACTCAACTTGGGAAATACATGTTTCATGAATAGTGCTATACAATGCCTTGTGCACACACCAGAATTCGCTAGATATTTTCGTGAAGATTACCACCGTGAAATAAATTGGCAAAATCCCCTGGGTATGGTGGTAAGTACTCTTTCTACTAGCATGGCGTTGGAGCCTTACGTTTGAACTTAAAGTGCTACAGAGATAGTGATATTATTTTGTAGCATGGCGTTGAAGCCTTACGTTTGAACTTAAAGTGTTACAGAGATAGTGATATTATTTTGTTACATGCATTTGGTTTGATGCCAGTCGAATTTGCTGATTTTAGATTTCTACATAGTATGCAACAACCGAGAGATTTTTGATACTTGGTGAAATTAGTGAAATTGACAATTTTGTTTGTTTTGATTCAGTAACAATTCCCTTTTTTTTTGACGGGAAAGTAACAATTCCCTTGGATATATACTTTTTGTGGGTTGTGCATTCTGTTATGCTACCTGCGTTCAAATTTCTACTTTTTTTCGTTGTATAAGTGACTTATCAAGTTTATTTGATGCTTCTGTTCTTTTTTATGTCAGCCTTTGTCAGTTCATATGGTTGCGCTTGAAATCAATTTTCTGATTTCTTCTTTTGACCAAAAAATTTCTAATTTCTTACAGCAAAGAGAATCTCAGATGCGTGATTCCCTTGTCATATTAAGATAACGGATACAAGCTACAGTTATTAGAAATAATTATTTTTTGGAACATTTTTTGTGCACTGATTTGGTGCGTGTGTA]
[+] EMBL AU172485             [                                      AACCGCATCTCCGCTCCCCCCTCGCCGCCGCCGACCACCGCAGCGCTCCCTCGCCGCCGCCGGAGGCCCACGCCGCGCAGTCGCGTCCGAGAAGCTCGGAGCTTTTTCAGGCAAGAGGCAGGGGCCCCCCCTCCAAACCCTAACCGTAGCTCCTCCTCCTCCAACTCGTCTCCTCCGCCGGTGGCGGTGGCGGTGGCGGAGATGGAGATGGAGATGGAGATGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_3278#0
CCTTCCTCCCATCCAAAGCCCACATCTCCTGCAGATCCAACCGCATCTCCGCTCCCCCCT
CGCCGCCGCCGACCACCGCAGCGCTCCCTCGCCGCCGCCGGAGGCCCACGCCGCGCAGTC
GCGTCCGAGAAGCTCGGAGCTTTTTCAGGCAAGAGGCAGGGGCCCCCCCTCCAAACCCTA
ACCGTAGCTCCTCCTCCTCCAACTCGTCTCCTCCGCCGGTGGCGGTGGCGGTGGCGGAGA
TGGAGATGGAGATGGAGATGGTGGTGGCCGTGCCGTCGCCGGAGGTGCCCGCGGAGGAGG
AGAGGGCGCTGATCCGGGACATCACCGTCGCCGCCGAGGCCCACGCCAAGGAAGGGGACA
CCTTCTTCCTCATCACCCACAGGTGGTGGCAAAGTTGGATTGATTATGTCATTCAAGATT
TGGCTAATTCAACGAATAATGGTTCTCATCATCATGAGCATGGTTCTAACGTTCTGAGAA
GACCAGGAGCAATTGACAATACAGATTTGATAGATGATACTGCATCTGAAGTCTCGAATA
TGGAGATTGAACTACATGATACATTGGTTGAGGGTCGTGACTATATACTGCTTCCCCAAC
AAGTCTGGGAAAAGTTGCACGGTTGGTATGGTGGAGGACCAACATTGCCAAGAAAGGCAA
TCAATACTGGCTTGTCTCAAACTGATTTAGCCATAGAAGTTTATCCTTTACGTCTGCAGT
TACTTCTGGCTCCAAAAGGAGAGCAAGCTGTTATAAGGATAAGCAAAAAAGATACAGTTG
GCGAACTCCATAAGAAGGCTTGTGAGGTTTTTGATTTGATACCTGATGAGGTCTGCATTT
GGGACTACTATGGCCGAACAAGACATTCTTTGATGGATAACTTGGAGAAAACCCTTGATG
ATGCCAACATTCAAATGGATCAAGATATTCTAGTGGAGGTTACTACCGATGCAAATGGTA
GTTTGGATGGTGGTTGCATTGGTTCAATCCAAGAAAATGAATATTTAGAACGAGAATCAA
CTTCCTTGATTGCAGATGCTTCGAAATCAGGATTATCAAATGAGAATTTTGCATCAAACA
ATTATACTTCCAGAAGCTACAGCTCTAGTCTTACACAAAGCCAGTACCTGCGATCTTCGA
ATGGGGACTTAGATAACATGCATGGTACTAGTGCCATGATCACCAGAGGATCTCCTTTAG
GTCTTACAGGGCTACTCAACTTGGGAAATACATGTTTCATGAATAGTGCTATACAATGCC
TTGTGCACACACCAGAATTCGCTAGATATTTTCGTGAAGATTACCACCGTGAAATAAATT
GGCAAAATCCCCTGGGTATGGTGGTAAGTACTCTTTCTACTAGCATGGCGTTGGAGCCTT
ACGTTTGAACTTAAAGTGCTACAGAGATAGTGATATTATTTTGTAGCATGGCGTTGAAGC
CTTACGTTTGAACTTAAAGTGTTACAGAGATAGTGATATTATTTTGTTACATGCATTTGG
TTTGATGCCAGTCGAATTTGCTGATTTTAGATTTCTACATAGTATGCAACAACCGAGAGA
TTTTTGATACTTGGTGAAATTAGTGAAATTGACAATTTTGTTTGTTTTGATTCAGTAACA
ATTCCCTTTTTTTTTGACGGGAAAGTAACAATTCCCTTGGATATATACTTTTTGTGGGTT
GTGCATTCTGTTATGCTACCTGCGTTCAAATTTCTACTTTTTTTCGTTGTATAAGTGACT
TATCAAGTTTATTTGATGCTTCTGTTCTTTTTTATGTCAGCCTTTGTCAGTTCATATGGT
TGCGCTTGAAATCAATTTTCTGATTTCTTCTTTTGACCAAAAAATTTCTAATTTCTTACA
GCAAAGAGAATCTCAGATGCGTGATTCCCTTGTCATATTAAGATAACGGATACAAGCTAC
AGTTATTAGAAATAATTATTTTTTGGAACATTTTTTGTGCACTGATTTGGTGCGTGTGTA
clustalw multiple alignements is not computed in this case