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Oryza sativa
cluster # 3288 cluster # 3288       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3288#0 length = 2900 sequences # 2  

consensusID : consensus_3288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2900
fasta sequence
                              [GTATCCAAACTCTTTCATGGTATCAGACTCTTCTCGATCCTAATCATCTTCCGCTGCTTCTCCATTCTTTCTTCTCTATGGCGTCGAGCTCTGTCTCCTCCGACGATGTCAACCCCTTCGCGGCAGGCTCTGTGGCCATCTCGGCGGCGACAGCGCAACTCATTCACATCAAGTCCCATGTTCCCGTGATCCTTGATCTCGGCGACTCCACCTTTGGCACCTGGCGCACCTTCTTCACCATTGCTTTCCGCAAGTTCGGCCTCCTCGATCACATCGACAGCACGACTAACGCCCGCCTCAAGCTCGACGACGCCGAGTGGACGCAGATCGACACCTGCATCGTCTCATGGCTTTACGCCACACTCTCCCCCGACCTCCTCTCCGCTGTGATCCAGCCGGACGACGACGCTTACACCGCCTGGAACGCCATCAGCTCCCAGTTTCTTGACAACGTCGTCCAGCGCACTGTCCAGACCCGGCAGGCGTTCCACGCTCTCCACCAGGCTGACATGACCATCACTGAGTACTGCGGCAAGATCAAGGTACTGGCAGACACGTTGCGCGACGTTGGCTCGCCTCTCACGAATCAGGATCTCGTTGTCAACCTCCTGAGCGGGCTGAACGACAAGTTTGCCCACTGCGTCTCCACCATCTCCGCGGCACGGCCGCCCATGACGTTCCTCCAAGCACGGTCCTTCCTCCTCCAAGAGGAGGTCTGGATCGCCAATCGCGCGCAGAAGGCCGCGACCACCGCCCTGCTTGCTGCCTCGCGATCCGCCGGCGCCTCCTCCAACGCGCCCGCCGTCGGATCCTCCACGCCCGCATCTGCTCCACCTGCCACCGGCGCCACTGGCAGCAATGGCGGCACTGGCGGCAACGGTCGCCCCTACAAACGCAAGAAGCAGGCTGGTCGCGCCGACGGCACCTCCGGCAACTCTGGCCCCTCCGGCAACTCCAGTGCGCCCATGGCATCCTGGGTCAACCCATGGACCGGCGTTGTCCAGGCCTGGCCCATCGCGTGGTTCCCTCTCACCTCGTCAGCTCCTGGCATTCTCGGCTCTCGCCCTGGTGCCGCCCCGCAGCAGTCCATGGTGGTGCAGCAGGCTCCGGCCGGCACGCTTCCGCCGGCGCTCTACCAGGCTCTCACCGGCCTGTCTCTACAGTCGACTCCGCCGAGCGCCACGGATTGGGTTTTCGACACTGGGGCCTCCACTCACATGGTTGGCAACTCCGGATCTTCGCAGCAAGACGGTTCTTCTCCGCAGTGACAGCCCTGGCGATCTCTATCCGCTGCGTTCCGCTGCCACGCCACTTGTTTCTGGCTTCCATGCCTCCGTCGACCTCTGGCACGATCGCTTGGGGCATCCTGGCCGGCCGGCGCTCTCTCGCATTTTGAATAACTTTAATTTTAGTTGTAAACCGAGTTCTCCTCACAATTGCAACTCATGTCGTCTTGGAAAACATGTTCGCCTCCCGTTCACTGCATCCTCGACTGTTTCTCCTTTTCTCTTCTCCCTTTTGCACTGTGATATATGGACTTCGCCTGTGTTGAGCTGTTCTGGTTTTTCAGTACTATCTCGTTATACTTGATGACTACTCTCACTACGTATGGACATTCCCACTGCGTCGCAAGTCCGACGTCGTGCCCACGCTCCTCACCTTCCATGCATTCGTTCGGGCGCAATTCGGACGGCCGATCTTGGCGTTTCAGACGGACAACGGACGTGAGTTCGACAACACCATCTTTTGCTCGTTCCTCGCCGCACATGGCATTGTCTCGCCGCCTCGTCACAACGTCTTCTCCAGCACATCATCAACCAGCTCCGAGTTGAGTTCGCGATGGACTTAGGTCCGGTGCACTTCTTTCTCGGCATCCAAGTGCGCCGCACGGCCGATGGCTTCTTCCTTTCACAGGAGCAGTACGCCGGCAACGTACTTGATCGTGCCAGCCTGGCAGACTGTAAGCCGGCGCCGACACCTGTCGACACGAAGGCCAAGGTCTCCAGTACGACAGGGCAGCCCTACAGTGATCCGACGTTCTATCGTAGCATCGTCGGGGCACTCCAGTACCTCACTCTCACACGGCCGGATTTGTCTTACGCTGTGCAACAGGTTTGCCTTCACATGCACTCGCCGCGGGACGTGCACTGGACACTTGTAAAGCGGATCCTCCGTTATGTTCGTGGCACGACACACAAAGGTCTGCAACTCCGGCGTTCTTCTACACCATCGCTCACCGCGTACTCCGATGCGGACTGGGCCGGCTGCCCCGACACACGCCGCTCGACGTCCGGCTTCTGCGTCTTCTTCGGCGACTCTTTGGTGTCGTGGTCCTCCAAACGACAGTCCATCGTGTCTCGCTCCAGTGCCGAGGCTGAGTACCGGGGTGTGGCGAACGCGGCTGCTGAATGTTGTTGGCTCCATCACCTTCTCGGCAAACTTCACGTCAAGCTCGACAAAGCCATGCTTGTGTACTGCGACAACATCTCCGCCGTTTACCTGTCCAAGAATCCAGTTCATCATGGTCGTGCTAAACATGTGGAGCTGGATGTCCACTTCGTCTGGGAAAAGGTGGCCGTTGGGGACATCCGCGTCGTGCACATTCCGACTCGACAACAGCTCGCCGATATCATGACGAAGGGATTGCCCACAGCGCTGTTTGAAGATTTCCGATCCAGTTTGTGCATCGTCGACGACGCACCAACTGCGGGGGGGTGTCAAGATGGCTGATCATGTAGATAAGGATAGGCTAGATTACAGTTTCTTTCTGACTTATTCTTCCGCTGTGCTCAGTCTACGATCCACTTTATTAGGATTCCGTTGGCACTCTTGAGCTGTACCGGCATGTATATATGTAAACTGGATGAGATCAATACACCTGCGCGTTGTATCCAAACTCT]

[+] EMBL AK108661             [GTATCCAAACTCTTTCATGGTATCAGACTCTTCTCGATCCTAATCATCTTCCGCTGCTTCTCCATTCTTTCTTCTCTATGGCGTCGAGCTCTGTCTCCTCCGACGATGTCAACCCCTTCGCGGCAGGCTCTGTGGCCATCTCGGCGGCGACAGCGCAACTCATTCACATCAAGTCCCATGTTCCCGTGATCCTTGATCTCGGCGACTCCACCTTTGGCACCTGGCGCACCTTCTTCACCATTGCTTTCCGCAAGTTCGGCCTCCTCGATCACATCGACAGCACGACTAACGCCCGCCTCAAGCTCGACGACGCCGAGTGGACGCAGATCGACACCTGCATCGTCTCATGGCTTTACGCCACACTCTCCCCCGACCTCCTCTCCGCTGTGATCCAGCCGGACGACGACGCTTACACCGCCTGGAACGCCATCAGCTCCCAGTTTCTTGACAACGTCGTCCAGCGCACTGTCCAGACCCGGCAGGCGTTCCACGCTCTCCACCAGGCTGACATGACCATCACTGAGTACTGCGGCAAGATCAAGGTACTGGCAGACACGTTGCGCGACGTTGGCTCGCCTCTCACGAATCAGGATCTCGTTGTCAACCTCCTGAGCGGGCTGAACGACAAGTTTGCCCACTGCGTCTCCACCATCTCCGCGGCACGGCCGCCCATGACGTTCCTCCAAGCACGGTCCTTCCTCCTCCAAGAGGAGGTCTGGATCGCCAATCGCGCGCAGAAGGCCGCGACCACCGCCCTGCTTGCTGCCTCGCGATCCGCCGGCGCCTCCTCCAACGCGCCCGCCGTCGGATCCTCCACGCCCGCATCTGCTCCACCTGCCACCGGCGCCACTGGCAGCAATGGCGGCACTGGCGGCAACGGTCGCCCCTACAAACGCAAGAAGCAGGCTGGTCGCGCCGACGGCACCTCCGGCAACTCTGGCCCCTCCGGCAACTCCAGTGCGCCCATGGCATCCTGGGTCAACCCATGGACCGGCGTTGTCCAGGCCTGGCCCATCGCGTGGTTCCCTCTCACCTCGTCAGCTCCTGGCATTCTCGGCTCTCGCCCTGGTGCCGCCCCGCAGCAGTCCATGGTGGTGCAGCAGGCTCCGGCCGGCACGCTTCCGCCGGCGCTCTACCAGGCTCTCACCGGCCTGTCTCTACAGTCGACTCCGCCGAGCGCCACGGATTGGGTTTTCGACACTGGGGCCTCCACTCACATGGTTGGCAACTCCGGATCTTCGCAGCAAGACGGTTCTTCTCCGCAGTGACAGCCCTGGCGATCTCTATCCGCTGCGTTCCGCTGCCACGCCACTTGTTTCTGGCTTCCATGCCTCCGTCGACCTCTGGCACGATCGCTTGGGGCATCCTGGCCGGCCGGCGCTCTCTCGCATTTTGAATAACTTTAATTTTAGTTGTAAACCGAGTTCTCCTCACAATTGCAACTCATGTCGTCTTGGAAAACATGTTCGCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK108634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGTAAACCGAGTTCTCCTCACAATTGCAACTCATGTCGTCTTGGAAAACATGTTCGCCTCCCGTTCACTGCATCCTCGACTGTTTCTCCTTTTCTCTTCTCCCTTTTGCACTGTGATATATGGACTTCGCCTGTGTTGAGCTGTTCTGGTTTTTCAGTACTATCTCGTTATACTTGATGACTACTCTCACTACGTATGGACATTCCCACTGCGTCGCAAGTCCGACGTCGTGCCCACGCTCCTCACCTTCCATGCATTCGTTCGGGCGCAATTCGGACGGCCGATCTTGGCGTTTCAGACGGACAACGGACGTGAGTTCGACAACACCATCTTTTGCTCGTTCCTCGCCGCACATGGCATTGTCTCGCCGCCTCGTCACAACGTCTTCTCCAGCACATCATCAACCAGCTCCGAGTTGAGTTCGCGATGGACTTAGGTCCGGTGCACTTCTTTCTCGGCATCCAAGTGCGCCGCACGGCCGATGGCTTCTTCCTTTCACAGGAGCAGTACGCCGGCAACGTACTTGATCGTGCCAGCCTGGCAGACTGTAAGCCGGCGCCGACACCTGTCGACACGAAGGCCAAGGTCTCCAGTACGACAGGGCAGCCCTACAGTGATCCGACGTTCTATCGTAGCATCGTCGGGGCACTCCAGTACCTCACTCTCACACGGCCGGATTTGTCTTACGCTGTGCAACAGGTTTGCCTTCACATGCACTCGCCGCGGGACGTGCACTGGACACTTGTAAAGCGGATCCTCCGTTATGTTCGTGGCACGACACACAAAGGTCTGCAACTCCGGCGTTCTTCTACACCATCGCTCACCGCGTACTCCGATGCGGACTGGGCCGGCTGCCCCGACACACGCCGCTCGACGTCCGGCTTCTGCGTCTTCTTCGGCGACTCTTTGGTGTCGTGGTCCTCCAAACGACAGTCCATCGTGTCTCGCTCCAGTGCCGAGGCTGAGTACCGGGGTGTGGCGAACGCGGCTGCTGAATGTTGTTGGCTCCATCACCTTCTCGGCAAACTTCACGTCAAGCTCGACAAAGCCATGCTTGTGTACTGCGACAACATCTCCGCCGTTTACCTGTCCAAGAATCCAGTTCATCATGGTCGTGCTAAACATGTGGAGCTGGATGTCCACTTCGTCTGGGAAAAGGTGGCCGTTGGGGACATCCGCGTCGTGCACATTCCGACTCGACAACAGCTCGCCGATATCATGACGAAGGGATTGCCCACAGCGCTGTTTGAAGATTTCCGATCCAGTTTGTGCATCGTCGACGACGCACCAACTGCGGGGGGGTGTCAAGATGGCTGATCATGTAGATAAGGATAGGCTAGATTACAGTTTCTTTCTGACTTATTCTTCCGCTGTGCTCAGTCTACGATCCACTTTATTAGGATTCCGTTGGCACTCTTGAGCTGTACCGGCATGTATATATGTAAACTGGATGAGATCAATACACCTGCGCGTTGTATCCAAACTCT]


>consensus_3288#0 GTATCCAAACTCTTTCATGGTATCAGACTCTTCTCGATCCTAATCATCTTCCGCTGCTTC TCCATTCTTTCTTCTCTATGGCGTCGAGCTCTGTCTCCTCCGACGATGTCAACCCCTTCG CGGCAGGCTCTGTGGCCATCTCGGCGGCGACAGCGCAACTCATTCACATCAAGTCCCATG TTCCCGTGATCCTTGATCTCGGCGACTCCACCTTTGGCACCTGGCGCACCTTCTTCACCA TTGCTTTCCGCAAGTTCGGCCTCCTCGATCACATCGACAGCACGACTAACGCCCGCCTCA AGCTCGACGACGCCGAGTGGACGCAGATCGACACCTGCATCGTCTCATGGCTTTACGCCA CACTCTCCCCCGACCTCCTCTCCGCTGTGATCCAGCCGGACGACGACGCTTACACCGCCT GGAACGCCATCAGCTCCCAGTTTCTTGACAACGTCGTCCAGCGCACTGTCCAGACCCGGC AGGCGTTCCACGCTCTCCACCAGGCTGACATGACCATCACTGAGTACTGCGGCAAGATCA AGGTACTGGCAGACACGTTGCGCGACGTTGGCTCGCCTCTCACGAATCAGGATCTCGTTG TCAACCTCCTGAGCGGGCTGAACGACAAGTTTGCCCACTGCGTCTCCACCATCTCCGCGG CACGGCCGCCCATGACGTTCCTCCAAGCACGGTCCTTCCTCCTCCAAGAGGAGGTCTGGA TCGCCAATCGCGCGCAGAAGGCCGCGACCACCGCCCTGCTTGCTGCCTCGCGATCCGCCG GCGCCTCCTCCAACGCGCCCGCCGTCGGATCCTCCACGCCCGCATCTGCTCCACCTGCCA CCGGCGCCACTGGCAGCAATGGCGGCACTGGCGGCAACGGTCGCCCCTACAAACGCAAGA AGCAGGCTGGTCGCGCCGACGGCACCTCCGGCAACTCTGGCCCCTCCGGCAACTCCAGTG CGCCCATGGCATCCTGGGTCAACCCATGGACCGGCGTTGTCCAGGCCTGGCCCATCGCGT GGTTCCCTCTCACCTCGTCAGCTCCTGGCATTCTCGGCTCTCGCCCTGGTGCCGCCCCGC AGCAGTCCATGGTGGTGCAGCAGGCTCCGGCCGGCACGCTTCCGCCGGCGCTCTACCAGG CTCTCACCGGCCTGTCTCTACAGTCGACTCCGCCGAGCGCCACGGATTGGGTTTTCGACA CTGGGGCCTCCACTCACATGGTTGGCAACTCCGGATCTTCGCAGCAAGACGGTTCTTCTC CGCAGTGACAGCCCTGGCGATCTCTATCCGCTGCGTTCCGCTGCCACGCCACTTGTTTCT GGCTTCCATGCCTCCGTCGACCTCTGGCACGATCGCTTGGGGCATCCTGGCCGGCCGGCG CTCTCTCGCATTTTGAATAACTTTAATTTTAGTTGTAAACCGAGTTCTCCTCACAATTGC AACTCATGTCGTCTTGGAAAACATGTTCGCCTCCCGTTCACTGCATCCTCGACTGTTTCT CCTTTTCTCTTCTCCCTTTTGCACTGTGATATATGGACTTCGCCTGTGTTGAGCTGTTCT GGTTTTTCAGTACTATCTCGTTATACTTGATGACTACTCTCACTACGTATGGACATTCCC ACTGCGTCGCAAGTCCGACGTCGTGCCCACGCTCCTCACCTTCCATGCATTCGTTCGGGC GCAATTCGGACGGCCGATCTTGGCGTTTCAGACGGACAACGGACGTGAGTTCGACAACAC CATCTTTTGCTCGTTCCTCGCCGCACATGGCATTGTCTCGCCGCCTCGTCACAACGTCTT CTCCAGCACATCATCAACCAGCTCCGAGTTGAGTTCGCGATGGACTTAGGTCCGGTGCAC TTCTTTCTCGGCATCCAAGTGCGCCGCACGGCCGATGGCTTCTTCCTTTCACAGGAGCAG TACGCCGGCAACGTACTTGATCGTGCCAGCCTGGCAGACTGTAAGCCGGCGCCGACACCT GTCGACACGAAGGCCAAGGTCTCCAGTACGACAGGGCAGCCCTACAGTGATCCGACGTTC TATCGTAGCATCGTCGGGGCACTCCAGTACCTCACTCTCACACGGCCGGATTTGTCTTAC GCTGTGCAACAGGTTTGCCTTCACATGCACTCGCCGCGGGACGTGCACTGGACACTTGTA AAGCGGATCCTCCGTTATGTTCGTGGCACGACACACAAAGGTCTGCAACTCCGGCGTTCT TCTACACCATCGCTCACCGCGTACTCCGATGCGGACTGGGCCGGCTGCCCCGACACACGC CGCTCGACGTCCGGCTTCTGCGTCTTCTTCGGCGACTCTTTGGTGTCGTGGTCCTCCAAA CGACAGTCCATCGTGTCTCGCTCCAGTGCCGAGGCTGAGTACCGGGGTGTGGCGAACGCG GCTGCTGAATGTTGTTGGCTCCATCACCTTCTCGGCAAACTTCACGTCAAGCTCGACAAA GCCATGCTTGTGTACTGCGACAACATCTCCGCCGTTTACCTGTCCAAGAATCCAGTTCAT CATGGTCGTGCTAAACATGTGGAGCTGGATGTCCACTTCGTCTGGGAAAAGGTGGCCGTT GGGGACATCCGCGTCGTGCACATTCCGACTCGACAACAGCTCGCCGATATCATGACGAAG GGATTGCCCACAGCGCTGTTTGAAGATTTCCGATCCAGTTTGTGCATCGTCGACGACGCA CCAACTGCGGGGGGGTGTCAAGATGGCTGATCATGTAGATAAGGATAGGCTAGATTACAG TTTCTTTCTGACTTATTCTTCCGCTGTGCTCAGTCTACGATCCACTTTATTAGGATTCCG TTGGCACTCTTGAGCTGTACCGGCATGTATATATGTAAACTGGATGAGATCAATACACCT GCGCGTTGTATCCAAACTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)