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Oryza sativa
cluster # 3300 cluster # 3300       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3300#0 length = 2073 sequences # 1  
consensus_3300#1 length = 2057 sequences # 1  

consensusID : consensus_3300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2073
fasta sequence
                              [CAAGTGGATCGATCGATCGAGTAAAAGAAGCAACGATCACTAGTGTCTCTCCACGGAGGAGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCATTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGGTGCGCGGGCGGCGTGCTGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGCGCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGGCCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCGCTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCCCCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCATCACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTCCGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCCCGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCGCGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATCGCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTCGCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTCCTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGCATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAGTGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACGCCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGATCGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACTCTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTGCTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTGGTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAATGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGACATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCACGGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCATTTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAGAGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGGTAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTACTGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTTCAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAAACACTTCAGATTCTCAACATAGTAACTATTCCAATGCATACAATTCTCAGCATAGCAACTACTCTGATGCAGTAGACTGTCTAAACAACAATTTGAGTGCATGCAATTCCAATGATCAGTCGCATGACTTTCAGAACTGTTACCAGGTCAGTTTAAAATATCAGCATGCTGCTGCAATGTCAACTGTTAAATTTATGGTTTTTGCCATTTGCCTTTACATCATAAATGTAATCTTGTTAAATTGTAGCAACACCTCTTTCAACAATAAACATGTGAT]

[+] EMBL AK109801             [CAAGTGGATCGATCGATCGAGTAAAAGAAGCAACGATCACTAGTGTCTCTCCACGGAGGAGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCATTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGGTGCGCGGGCGGCGTGCTGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGCGCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGGCCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCGCTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCCCCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCATCACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTCCGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCCCGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCGCGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATCGCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTCGCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTCCTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGCATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAGTGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACGCCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGATCGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACTCTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTGCTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTGGTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAATGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGACATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCACGGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCATTTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAGAGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGGTAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTACTGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTTCAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAAACACTTCAGATTCTCAACATAGTAACTATTCCAATGCATACAATTCTCAGCATAGCAACTACTCTGATGCAGTAGACTGTCTAAACAACAATTTGAGTGCATGCAATTCCAATGATCAGTCGCATGACTTTCAGAACTGTTACCAGGTCAGTTTAAAATATCAGCATGCTGCTGCAATGTCAACTGTTAAATTTATGGTTTTTGCCATTTGCCTTTACATCATAAATGTAATCTTGTTAAATTGTAGCAACACCTCTTTCAACAATAAACATGTGAT]


>consensus_3300#0 CAAGTGGATCGATCGATCGAGTAAAAGAAGCAACGATCACTAGTGTCTCTCCACGGAGGA GGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCAT TGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGGTGCGCGGGCGGCGTGCTGCT CCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGCGCAG GCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGGCCTC GCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCGCTCC GGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCCCCGT CGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCATCACC GACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTCCGCC GCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCCCGAG GCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCGCGAG CTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATCGCAT GGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTCGCTC TGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTCCTGT TCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGCATTC CATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAGTGGT GCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACGCCAT GCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGATCGAG TGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACTCTCT GCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTGCTGC TGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTGGTCA AAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAATGGG TTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGACATC CACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCACGGAA GAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCATTTGC ATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAGAGAA GAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGGTAGT TGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTACTGAA AGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTTCAGG AAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAAACAC TTCAGATTCTCAACATAGTAACTATTCCAATGCATACAATTCTCAGCATAGCAACTACTC TGATGCAGTAGACTGTCTAAACAACAATTTGAGTGCATGCAATTCCAATGATCAGTCGCA TGACTTTCAGAACTGTTACCAGGTCAGTTTAAAATATCAGCATGCTGCTGCAATGTCAAC TGTTAAATTTATGGTTTTTGCCATTTGCCTTTACATCATAAATGTAATCTTGTTAAATTG TAGCAACACCTCTTTCAACAATAAACATGTGAT



consensusID : consensus_3300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2057
fasta sequence
                              [ACAAGTGGATCGATCGATCGAGTAAAAGGAGCAACGATCACTAGTGTCTCTCCACGGAGGAGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCATTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGCGGGTGCGCGGGCGGCGTGCTGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGCGCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGGCCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCGCTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCCCCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCATCACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTCCGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCCCGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCGCGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATCGCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTCGCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTCCTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGCATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAGTGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACGCCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGATCGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACTCTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTGCTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTGGTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAATGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGACATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCACGGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCATTTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAGAGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGGTAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTACTGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTTCAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAAACACTTCAGATTCTCAACATAGTAACTGTTCCAATGCATACAATTCTCAGCATAGCAACTACTCTGATGCAGTAGACTGTCTAAACAACAATATGAGTGCATGCAATTCCAATGATCAGTCGCATGACTTTCAGAACTGTTACCAGAGGGACAGAGAGGTTGAATCTTCTGCTACTTGCATGAACAATGAGCCCAACCAACCAAGTCCAACTTCAGTCCTCGAAGCATGCTTCTCGAATGATACTTCATCGTTAGGA]

[+] EMBL AK108760             [ACAAGTGGATCGATCGATCGAGTAAAAGGAGCAACGATCACTAGTGTCTCTCCACGGAGGAGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCATTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGCGGGTGCGCGGGCGGCGTGCTGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGCGCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGGCCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCGCTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCCCCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCATCACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTCCGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCCCGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCGCGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATCGCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTCGCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTCCTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGCATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAGTGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACGCCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGATCGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACTCTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTGCTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTGGTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAATGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGACATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCACGGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCATTTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAGAGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGGTAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTACTGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTTCAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAAACACTTCAGATTCTCAACATAGTAACTGTTCCAATGCATACAATTCTCAGCATAGCAACTACTCTGATGCAGTAGACTGTCTAAACAACAATATGAGTGCATGCAATTCCAATGATCAGTCGCATGACTTTCAGAACTGTTACCAGAGGGACAGAGAGGTTGAATCTTCTGCTACTTGCATGAACAATGAGCCCAACCAACCAAGTCCAACTTCAGTCCTCGAAGCATGCTTCTCGAATGATACTTCATCGTTAGGA]


>consensus_3300#1 ACAAGTGGATCGATCGATCGAGTAAAAGGAGCAACGATCACTAGTGTCTCTCCACGGAGG AGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCA TTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGCGGGTGCGCGGGCGGCGTGC TGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGC GCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGG CCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCG CTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCC CCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCAT CACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTC CGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCC CGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCG CGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATC GCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTC GCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTC CTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGC ATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAG TGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACG CCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGAT CGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACT CTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTG CTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTG GTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAA TGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGA CATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCAC GGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCAT TTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAG AGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGG TAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTAC TGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTT CAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAA ACACTTCAGATTCTCAACATAGTAACTGTTCCAATGCATACAATTCTCAGCATAGCAACT ACTCTGATGCAGTAGACTGTCTAAACAACAATATGAGTGCATGCAATTCCAATGATCAGT CGCATGACTTTCAGAACTGTTACCAGAGGGACAGAGAGGTTGAATCTTCTGCTACTTGCA TGAACAATGAGCCCAACCAACCAAGTCCAACTTCAGTCCTCGAAGCATGCTTCTCGAATG ATACTTCATCGTTAGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3300#0      -CAAGTGGATCGATCGATCGAGTAAAAGAAGCAACGATCACTAGTGTCTCTCCACGGAGG 59
consensus_3300#1      ACAAGTGGATCGATCGATCGAGTAAAAGGAGCAACGATCACTAGTGTCTCTCCACGGAGG 60
                       *************************** *******************************

consensus_3300#0      AGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCA 119
consensus_3300#1      AGGAGGAGGTTTGACAAGGTGGCAGAGACGGAGGGAGGAGGAGGATGAGTAGCCTGGCCA 120
                      ************************************************************

consensus_3300#0      TTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGG---GTGCGCGGGCGGCGTGC 176
consensus_3300#1      TTGTGGAGAAGAGGCCGGCGCCGTTCGTCGGCGGCGGCGGCGGGTGCGCGGGCGGCGTGC 180
                      ****************************************   *****************

consensus_3300#0      TGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGC 236
consensus_3300#1      TGCTCCACCTCCTGGACTGGCACCGCCGCCTCGCCCGCAAGCGCCGCCTCTTCTCGCCGC 240
                      ************************************************************

consensus_3300#0      GCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGG 296
consensus_3300#1      GCAGGCTCCTCCCCACCTCGCTCCGCTCTTCCCCGCGCAGGCTCCCGTCCCCGCCTCAGG 300
                      ************************************************************

consensus_3300#0      CCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCG 356
consensus_3300#1      CCTCGCATCCTCCTCCCGCGCCTCGCTTGTCCTCCGCCGCAACCGCCGCCGGTGTCGCCG 360
                      ************************************************************

consensus_3300#0      CTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCC 416
consensus_3300#1      CTCCGGGCGTGGGCGTCGTCGCGCGCCTCATGGGTCTCGAGTCGTGGCCCGCCACTGGCC 420
                      ************************************************************

consensus_3300#0      CCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCAT 476
consensus_3300#1      CCGTCGGCGCGCCCCCGGCGGCGCGGAGGCCGCAGAAGCAGAGGAAGGTGGAGGTGGCAT 480
                      ************************************************************

consensus_3300#0      CACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTC 536
consensus_3300#1      CACCGACGCCGCGGGCCGACGAGCCAGACGTGGTCCTGGTGTTGCCTCCGAGCCAGCGTC 540
                      ************************************************************

consensus_3300#0      CGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCC 596
consensus_3300#1      CGCCGCCGCTATCGCCTGCGGCAAGGAACCATCACGGCGCCGACCTGCCGGCGAGGAGCC 600
                      ************************************************************

consensus_3300#0      CGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCG 656
consensus_3300#1      CGAGGCGGAGCCGACTCGTGCATGCCGCGGCGACCAAGCTGTTGGAGCCTAGCGCTCGCG 660
                      ************************************************************

consensus_3300#0      CGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATC 716
consensus_3300#1      CGAGCTCGAGGGCGAGTGCCAGGTTGGCCCTCGCGTACGCCTGCTCCTCCCCGCAGCATC 720
                      ************************************************************

consensus_3300#0      GCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTC 776
consensus_3300#1      GCATGGATGGCCATTCCAATGCGTTGCAAAGCTCAAGTATGCCTGATGACTTCCTGTCTC 780
                      ************************************************************

consensus_3300#0      GCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTC 836
consensus_3300#1      GCTCTGATAGCCTGCCATTAGAGCGTTCGTCCAGATTGCAGCCGGTCGTTGCCCAGCCTC 840
                      ************************************************************

consensus_3300#0      CTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGC 896
consensus_3300#1      CTGTTCTTCCGGCGGAGACAGAATGGGACAATGTCATTACTTCCAGTAGGCATGAGAAGC 900
                      ************************************************************

consensus_3300#0      ATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAG 956
consensus_3300#1      ATTCCATTGACACAATAAGCAGCTCTGATGCTGCAGATGTAGTAAGTGGTGATGCAATAG 960
                      ************************************************************

consensus_3300#0      TGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACG 1016
consensus_3300#1      TGGTGCTAAGATCGGGTTTTGATGATGCAAATGTGAGTAGAAGCAGCTCTGGTGCGGACG 1020
                      ************************************************************

consensus_3300#0      CCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGAT 1076
consensus_3300#1      CCATGCCCAAGGATCACAAGGCAAGAACTGACAGACTGAGCAACTGTTCAAGAATGAGAT 1080
                      ************************************************************

consensus_3300#0      CGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACT 1136
consensus_3300#1      CGAGTGGTGCTGGCGTTCGAGCTGGAGAAGAGAGGTCATTGCGCAAGCGAGGAACTCACT 1140
                      ************************************************************

consensus_3300#0      CTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTG 1196
consensus_3300#1      CTCTGCAAGATGTTGAGGGGAATATTGGATCTCGGAGCTTGGTTAGTTCCACTCATCCTG 1200
                      ************************************************************

consensus_3300#0      CTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTG 1256
consensus_3300#1      CTGCTGGTAGTGCTCGCGAACTGATGTCTGGCAGTAGGAGAGCTGCACACCATGGTTCTG 1260
                      ************************************************************

consensus_3300#0      GTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAA 1316
consensus_3300#1      GTCAAAGAAGGGAGTTGATGGGTACAATCACTCCACAAAGAAGCAGTCGCAGGGAGGTAA 1320
                      ************************************************************

consensus_3300#0      TGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGA 1376
consensus_3300#1      TGGGTTCAAGCAATCCACAAAGAAACACTCGCCGAAGCTCGATTGACCGGAGTGGATTGA 1380
                      ************************************************************

consensus_3300#0      CATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCAC 1436
consensus_3300#1      CATCCACAACCACAAGTAGGATTGCAGTCAGTACTGTATCTGGGCAAAAAAGGGGATCAC 1440
                      ************************************************************

consensus_3300#0      GGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCAT 1496
consensus_3300#1      GGAAGAATGTAGGCCGTGACAATGCAGCCTGTAACAGAGAAGTTAATAATCCAGTTGCAT 1500
                      ************************************************************

consensus_3300#0      TTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAG 1556
consensus_3300#1      TTGCATCTAGTTCATCTGTGAACCCAGTGACAAGGAATTCATCGCAAAGCAAAGTTTCAG 1560
                      ************************************************************

consensus_3300#0      AGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGG 1616
consensus_3300#1      AGAAGAGAGGGTGCAGAAGGACACAAGTTATTAGTACCAGTTGTAGTACAAGATTGCCGG 1620
                      ************************************************************

consensus_3300#0      TAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTAC 1676
consensus_3300#1      TAGTTGAATCTTCACCTTCTGTTGTGGGTAGTTCTGAGAAAGAGGAGTTTAGCAGGCTAC 1680
                      ************************************************************

consensus_3300#0      TGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTT 1736
consensus_3300#1      TGAAAGCAAAAATTAATGAGCTTGGTTTGTCTGATAGGATTGAATCAAGTGATGCTCTTT 1740
                      ************************************************************

consensus_3300#0      CAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAA 1796
consensus_3300#1      CAGGAAAATTAACTGCATCAGTGCTTCAAGAGCTCATTTCTGCCCTCACTAATGATACAA 1800
                      ************************************************************

consensus_3300#0      ACACTTCAGATTCTCAACATAGTAACTATTCCAATGCATACAATTCTCAGCATAGCAACT 1856
consensus_3300#1      ACACTTCAGATTCTCAACATAGTAACTGTTCCAATGCATACAATTCTCAGCATAGCAACT 1860
                      *************************** ********************************

consensus_3300#0      ACTCTGATGCAGTAGACTGTCTAAACAACAATTTGAGTGCATGCAATTCCAATGATCAGT 1916
consensus_3300#1      ACTCTGATGCAGTAGACTGTCTAAACAACAATATGAGTGCATGCAATTCCAATGATCAGT 1920
                      ******************************** ***************************

consensus_3300#0      CGCATGACTTTCAGAACTGTTACCAGGTCAGTTTAAAATATCAGCATGCTGCTGCA-ATG 1975
consensus_3300#1      CGCATGACTTTCAGAACTGTTACCAGAGGGACAGAGAGGTTGAATCTTCTGCTACTTGCA 1980
                      **************************        * *   * *   * ***** *     

consensus_3300#0      TCAACTGTTAAATTTATGGTTTTTGCCATTTGCCTTTACATCATAAATGTAATCTTGTTA 2035
consensus_3300#1      TGAACAATGAGCCCAACCAACCAAG---TCCAACTTCA-GTCCTCGAAGCATGCTTCTCG 2036
                      * ***  * *     *        *   *    *** *  ** *  * * *  *** *  

consensus_3300#0      AATTGTAGCAACACCTCTTTCAACAATAAACATGTGAT 2073
consensus_3300#1      AATGATA-CTTCATCGTTAGGA---------------- 2057
                      ***  ** *  ** *  *   *                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)