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Oryza sativa
cluster # 331 cluster # 331       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_331#0 length = 1404 sequences # 2  

consensusID : consensus_331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1404
fasta sequence
                              [CTGTCCCGGCTGGAGTCGCGCGGGTCGGACACCATGGACGCGCTCCTCCGCGCCGAGGCGGAGCAGGGCCGGCCGGTGGACGCGGTGGTGTACGACTCGTTCCTGAGCTGGGCGCCGCGCGTGGCGGCGCGCCACGGTGCGGCGACCGCGTCCTTCTTCACGCAGGCGTGCGCGGTGAACGCGGCGTACGAGAGCGTGTTCACGGGCCGGGTCGAGCTGCCGCTCGCCGCCGACGGCGAGGAGCCGCTACGGCTGCCCGGGATTTCCGTCGGCCTCACGCTGGACGACGTGCCGACGTTCATGGCGAACACGGAGGACAGCCCGGCGTACCTCGACCTCCTGGTGAACCAGTTCAAGGGCCTGGACATGGCCGACCATGTCCTCGTCAACTCCTTCT-ACGAGCTCCAGCCACAGGAAGCGGAGCACATGGCGTCGGCGTGGCGGGCCAAGACGGTGGGGCTGACCGTGCCATCGGCGTACCTCGACAACCGCCTCCCGGACGACACGTCGTACGGCTTCCACCTCTTCTCGCCGACGACGGAGACGAAGGCCTGGCTGGAGGCGAGACCACCGCGCACCGTGGCGTACGTCTCCTTCGGCAGCGTGGCGACGCCGAGCCCGGCGCAGATGGCCGAGGTGGCGGAGGGTTTGTACAACACCGGCAAGCCCTTCCTC-GGGTGGTGAGGGCATCGGAAACCTCCAAGATACCGGAAGGCTTCGCCGCCAAGGCGGCGAAGCAAGGGAGAGGGCTCATCGTGACGTGGTGCCCGCAGCTGGAGGTGCTGGCACACCCAGCTGTGGGGTGCTTCGTGACGCACTGCGGGTGGAACTCAACGACAGAGGGGTTGAGTGCCGGTGTACCAATGGTGGCGGTACCGCAGTGGTCAGACCAGACAATGAATGCCAAGTACATTGAGGACGTGTGGCGTGTTGGGGTGCGGGTGCGGCCCGACGGCGAGGGGGTGGTGAGGAAGGAGGAGTTGGAGAGGTGTGTGAGGGAGGTGATGGAAGGGGAGAGGAGCAAGGAGTTCATGGAGAATGCTAATGGTTGGAAGGAGAAGGCCAGAAATGCCATGTGTGAAGGTGGCAGCTCCGACAAAAATATCGTCGAGTTCATCGCTAAGATTGGAGTGGACCGAAAATTTAAATGATTGAGACAGGTGGATTCGTCGGCCATTGGTCATGTTTCCTTTCTCATTTGATTTCACTATCATGTTTTCAGATGCAATAATAGTCGTTATCTGTCGCTCTAGTCTTTCTTTTTCTAGTATAGGATCAAATATTTGCGATATCTTTTTCCCACTATATTCAATGAAATGGGCACAGTCGGATGCCGATTCGTTAAAAAAATATTTTACGATATGTATAGTAAAATAATCAGTCATCAGTCAATGCATTAATTGC]

[+] EMBL AK064395             [CTGTCCCGGCTGGAGTCGCGCGGGTCGGACACCATGGACGCGCTCCTCCGCGCCGAGGCGGAGCAGGGCCGGCCGGTGGACGCGGTGGTGTACGACTCGTTCCTGAGCTGGGCGCCGCGCGTGGCGGCGCGCCACGGTGCGGCGACCGCGTCCTTCTTCACGCAGGCGTGCGCGGTGAACGCGGCGTACGAGAGCGTGTTCACGGGCCGGGTCGAGCTGCCGCTCGCCGCCGACGGCGAGGAGCCGCTACGGCTGCCCGGGATTTCCGTCGGCCTCACGCTGGACGACGTGCCGACGTTCATGGCGAACACGGAGGACAGCCCGGCGTACCTCGACCTCCTGGTGAACCAGTTCAAGGGCCTGGACATGGCCGACCATGTCCTCGTCAACTCCTTCT ACGAGCTCCAGCCACAGGAAGCGGAGCACATGGCGTCGGCGTGGCGGGCCAAGACGGTGGGGCTGACCGTGCCATCGGCGTACCTCGACAACCGCCTCCCGGACGACACGTCGTACGGCTTCCACCTCTTCTCGCCGACGACGGAGACGAAGGCCTGGCTGGAGGCGAGACCACCGCGCACCGTGGCGTACGTCTCCTTCGGCAGCGTGGCGACGCCGAGCCCGGCGCAGATGGCCGAGGTGGCGGAGGGTTTGTACAACACCGGCAAGCCCTTCCTC GGGTGGTGAGGGCATCGGAAACCTCCAAGATACCGGAAGGCTTCGCCGCCAAGGCGGCGAAGCAAGGGAGAGGGCTCATCGTGACGTGGTGCCCGCAGCTGGAGGTGCTGGCACACCCAGCTGTGGGGTGCTTCGTGACGCACTGCGGGTGGAACTCAACGACAGAGGGGTTGAGTGCCGGTGTACCAATGGTGGCGGTACCGCAGTGGTCAGACCAGACAATGAATGCCAAGTACATTGAGGACGTGTGGCGTGTTGGGGTGCGGGTGCGGCCCGACGGCGAGGGGGTGGTGAGGAAGGAGGAGTTGGAGAGGTGTGTGAGGGAGGTGATGGAAGGGGAGAGGAGCAAGGAGTTCATGGAGAATGCTAATGGTTGGAAGGAGAAGGCCAGAAATGCCATGTGTGAAGGTGGCAGCTCCGACAAAAATATCGTCGAGTTCATCGCTAAGATTGGAGTGGACCGAAAATTTAAATGATTGAGACAGGTGGATTCGTCGGCCATTGGTCATGTTTCCTTTCTCATTTGATTTCACTATCATGTTTTCAGATGCAATAATAGTCGTTATCTGTCGCTCTAGTCTTTCTTTTTCTAGTATAGGATCAAATATTTGCGATATCTTTTTCCCACTATATTCAATGAAATGGGCACAGTCGGATGCCGATTCGTTAAAAAAATATTTTACGATATGTATAGTAAAATAATCAGTCATCAGTCAATGCATTAATTGC]
[+] EMBL AK121725             [CTGTCCCGGCTGGAGTCGCGCGGGTCGGACACCATGGACGCGCTCCTCCGCGCCGAGGCGGAGCAGGGCCGGCCGGTGGACGCGGTGGTGTACGACTCGTTCCTGAGCTGGGCGCCGCGCGTGGCGGCGCGCCACGGTGCGGCGACCGCGTCCTTCTTCACGCAGGCGTGCGCGGTGAACGCGGCGTACGAGAGCGTGTTCACGGGCCGGGTCGAGCTGCCGCTCGCCGCCGACGGCGAGGAGCCGCTACGGCTGCCCGGGATTTCCGTCGGCCTCACGCTGGACGACGTGCCGACGTTCATGGCGAACACGGAGGACAGCCCGGCGTACCTCGACCTCCTGGTGAACCAGTTCAAGGGCCTGGACATGGCCGACCATGTCCTCGTCAACTCCTTCTAACGAGCTCCAGCCACAGGAAGCGGAGCACATGGCGTCGGCGTGGTGGCCCAAGACGGTGGGGCTGACCGTGCCATCGGCGTACCTCGACAACCGCCTCCCGGACGACACGTCGTACGGCTTCCACCTCTTCTCGCCGACGACGGAGACGAAGGCCTGGCTGGAGGCGAGACCACCGCGCACCGTGGCGTACGTCTCCTTCGGCAGCGTGGCGACGCCGAGCCCGGCGCAGATGGCCGAGGTGGCGGAGGGTTTGTACAACACCGGCAAGCCCTTCCTCTGGGTGGTGAGGGCATCGGAAACCTCCAAGATACCGGAAGGCTTCGCCGCCAAGGCGGCGAAGCAAGGGAGAGGGCTCATCGTGACGTGGTGCCCGCAGCTGGAGGTGCTGGCACACCCAGCTGTGGGGTGCTTCGTGACGCACTGCGGGTGGAACTCAACGACAGAGGGGTTGAGTGCCGGTGTACCAATGGTGGCGGTACCGCAGTGGTCAGACCAGACAATGAATGCCAAGTACATTGAGGACGTGTGGCGTGTTGGGGTGCGGGTGCGGCCCGACGGCGAGGGGGTGGTGAGGAAGGAGGAGTTGGAGAGGTGTGTGAGGGAGGTGATGGAAGGGGAGAGGAGCAAGGAGTTCATGGAGAATGCTAATGGTTGGAAGGAGAAGGCCAGAAATGCCATGTGTGAAGGTGGCAGCTCCGACAAAAATATCGTCGAGTTCATCGCTAAGATTGGAGTGGACCGAAAATTTAAATGATTGAGACAGGTGGATTCGTCGGCCATTGGTCATGTTTCCTTTCTCATTTGATTTCACTATCATGTTTTCAGATGCAATAATAGTCGTTATCTGTCGCTCTAGTCTTTCTTTTTCTAGTATAGGATCAAATATTTGCGATATCTTTTTCCCACTATATTCAATGAAATGGGCACAGTCGGATG                                                                       ]


>consensus_331#0 CTGTCCCGGCTGGAGTCGCGCGGGTCGGACACCATGGACGCGCTCCTCCGCGCCGAGGCG GAGCAGGGCCGGCCGGTGGACGCGGTGGTGTACGACTCGTTCCTGAGCTGGGCGCCGCGC GTGGCGGCGCGCCACGGTGCGGCGACCGCGTCCTTCTTCACGCAGGCGTGCGCGGTGAAC GCGGCGTACGAGAGCGTGTTCACGGGCCGGGTCGAGCTGCCGCTCGCCGCCGACGGCGAG GAGCCGCTACGGCTGCCCGGGATTTCCGTCGGCCTCACGCTGGACGACGTGCCGACGTTC ATGGCGAACACGGAGGACAGCCCGGCGTACCTCGACCTCCTGGTGAACCAGTTCAAGGGC CTGGACATGGCCGACCATGTCCTCGTCAACTCCTTCTACGAGCTCCAGCCACAGGAAGCG GAGCACATGGCGTCGGCGTGGCGGGCCAAGACGGTGGGGCTGACCGTGCCATCGGCGTAC CTCGACAACCGCCTCCCGGACGACACGTCGTACGGCTTCCACCTCTTCTCGCCGACGACG GAGACGAAGGCCTGGCTGGAGGCGAGACCACCGCGCACCGTGGCGTACGTCTCCTTCGGC AGCGTGGCGACGCCGAGCCCGGCGCAGATGGCCGAGGTGGCGGAGGGTTTGTACAACACC GGCAAGCCCTTCCTCGGGTGGTGAGGGCATCGGAAACCTCCAAGATACCGGAAGGCTTCG CCGCCAAGGCGGCGAAGCAAGGGAGAGGGCTCATCGTGACGTGGTGCCCGCAGCTGGAGG TGCTGGCACACCCAGCTGTGGGGTGCTTCGTGACGCACTGCGGGTGGAACTCAACGACAG AGGGGTTGAGTGCCGGTGTACCAATGGTGGCGGTACCGCAGTGGTCAGACCAGACAATGA ATGCCAAGTACATTGAGGACGTGTGGCGTGTTGGGGTGCGGGTGCGGCCCGACGGCGAGG GGGTGGTGAGGAAGGAGGAGTTGGAGAGGTGTGTGAGGGAGGTGATGGAAGGGGAGAGGA GCAAGGAGTTCATGGAGAATGCTAATGGTTGGAAGGAGAAGGCCAGAAATGCCATGTGTG AAGGTGGCAGCTCCGACAAAAATATCGTCGAGTTCATCGCTAAGATTGGAGTGGACCGAA AATTTAAATGATTGAGACAGGTGGATTCGTCGGCCATTGGTCATGTTTCCTTTCTCATTT GATTTCACTATCATGTTTTCAGATGCAATAATAGTCGTTATCTGTCGCTCTAGTCTTTCT TTTTCTAGTATAGGATCAAATATTTGCGATATCTTTTTCCCACTATATTCAATGAAATGG GCACAGTCGGATGCCGATTCGTTAAAAAAATATTTTACGATATGTATAGTAAAATAATCA GTCATCAGTCAATGCATTAATTGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)